RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 WNT8AQ9H1J5 351 aa19.31■□□□□ 0.68
TRAPPC1-201ENST00000303731 DDX41Q9UJV9 622 aaKnown RBP19.31■□□□□ 0.68
TRAPPC1-201ENST00000303731 MRVI1Q9Y6F6 885 aa19.31■□□□□ 0.68
TRAPPC1-201ENST00000303731 TAF6LQ9Y6J9 622 aa19.31■□□□□ 0.68
TRAPPC1-201ENST00000303731 A0A0C4DFX4 3053 aa19.31■□□□□ 0.68
TRAPPC1-201ENST00000303731 UMODL1Q5DID0 1318 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 RFC2P35250 354 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 ANTXR2P58335 489 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 BFSP2Q13515 415 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 CENPQQ7L2Z9 268 aaPredicted RBP19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 CHST3Q7LGC8 479 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 SESTD1Q86VW0 696 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 CCDC155Q8N6L0 562 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 AFG1LQ8WV93 481 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 TMEM87BQ96K49 555 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 ESYT1Q9BSJ8 1104 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 KATNAL1Q9BW62 490 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 SPZ1Q9BXG8 430 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 NOD1Q9Y239 953 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 CUL9Q8IWT3 2517 aa19.3■□□□□ 0.68
TRAPPC1-201ENST00000303731 CYTH3O43739 400 aa19.29■□□□□ 0.68
TRAPPC1-201ENST00000303731 TGFB3P10600 412 aa19.29■□□□□ 0.68
TRAPPC1-201ENST00000303731 GNAQP50148 359 aa19.29■□□□□ 0.68
TRAPPC1-201ENST00000303731 BMP2KLQ5H9B9 411 aa19.29■□□□□ 0.68
TRAPPC1-201ENST00000303731 VSIG10LQ86VR7 867 aa19.29■□□□□ 0.68
TRAPPC1-201ENST00000303731 ZNF654Q8IZM8 581 aa19.29■□□□□ 0.68
TRAPPC1-201ENST00000303731 PPTC7Q8NI37 304 aa19.29■□□□□ 0.68
TRAPPC1-201ENST00000303731 LSG1Q9H089 658 aaKnown RBP19.29■□□□□ 0.68
TRAPPC1-201ENST00000303731 LY9Q9HBG7 655 aa19.29■□□□□ 0.68
TRAPPC1-201ENST00000303731 SENP2Q9HC62 589 aa19.29■□□□□ 0.68
TRAPPC1-201ENST00000303731 TANC1Q9C0D5 1861 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 UNC80Q8N2C7 3258 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 MYH7BA7E2Y1 1941 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 PRC1O43663 620 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 STAM2O75886 525 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 CALM1P0DP23 149 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 CALM2P0DP24 149 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 CALM3P0DP25 149 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 CYP2C9P11712 490 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 FOSL2P15408 326 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 CCND2P30279 289 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 PGM5Q15124 567 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 DHX37Q8IY37 1157 aaKnown RBP19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 RETREG2Q8NC44 543 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 RRP36Q96EU6 259 aaKnown RBP19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 PBX4Q9BYU1 374 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 ZNF576Q9H609 170 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 MSRAQ9UJ68 235 aa19.28■□□□□ 0.68
TRAPPC1-201ENST00000303731 CCDC69A6NI79 296 aa19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 MYCLP12524 364 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 ACTN1P12814 892 aa19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 HOXA13P31271 388 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 LIFRP42702 1097 aa19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 SLC35G1Q2M3R5 365 aa19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 GNPTABQ3T906 1256 aa19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 RNF20Q5VTR2 975 aa19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 NFXL1Q6ZNB6 911 aa19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 OTOP2Q7RTS6 562 aa19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 MAFAQ8NHW3 353 aaPredicted RBP19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 CAGE1Q8TC20 777 aa19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 MYLIPQ8WY64 445 aa19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 SEC63Q9UGP8 760 aaKnown RBP19.27■□□□□ 0.68
TRAPPC1-201ENST00000303731 SLC27A2O14975 620 aa19.26■□□□□ 0.67
TRAPPC1-201ENST00000303731 PTGISQ16647 500 aa19.26■□□□□ 0.67
TRAPPC1-201ENST00000303731 SCLYQ96I15 445 aa19.26■□□□□ 0.67
TRAPPC1-201ENST00000303731 ANO2Q9NQ90 1003 aa19.26■□□□□ 0.67
TRAPPC1-201ENST00000303731 SLC4A7Q9Y6M7 1214 aa19.26■□□□□ 0.67
TRAPPC1-201ENST00000303731 FRMPD4Q14CM0 1322 aa19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 DLL1O00548 723 aa19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 SH2B2O14492 632 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 PPFIA4O75335 1185 aa19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 PARNO95453 639 aaKnown RBP19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 F2P00734 622 aa19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 HOXD8P13378 290 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 NECTIN1Q15223 517 aa19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 MYSM1Q5VVJ2 828 aa19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 CREB3L3Q68CJ9 461 aa19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 FCHSD1Q86WN1 690 aa19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 C7orf31Q8N865 590 aa19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 AFAP1L1Q8TED9 768 aa19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 KAT2BQ92831 832 aa19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 CUL5Q93034 780 aa19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 CXXC1Q9P0U4 656 aaPredicted RBP19.25■□□□□ 0.67
TRAPPC1-201ENST00000303731 RGS20O76081 388 aa19.24■□□□□ 0.67
TRAPPC1-201ENST00000303731 IQCF3P0C7M6 154 aa19.24■□□□□ 0.67
TRAPPC1-201ENST00000303731 CHMP4BP1P59074 171 aa19.24■□□□□ 0.67
TRAPPC1-201ENST00000303731 GRIN2CQ14957 1233 aa19.24■□□□□ 0.67
TRAPPC1-201ENST00000303731 CELF3Q5SZQ8 465 aaKnown RBP19.24■□□□□ 0.67
TRAPPC1-201ENST00000303731 XRRA1Q6P2D8 792 aa19.24■□□□□ 0.67
TRAPPC1-201ENST00000303731 GTF2IRD1Q9UHL9 959 aa19.24■□□□□ 0.67
TRAPPC1-201ENST00000303731 MYO9BQ13459 2157 aa19.24■□□□□ 0.67
TRAPPC1-201ENST00000303731 TRIP12Q14669 1992 aaPredicted RBP19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 EYSQ5T1H1 3165 aa19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 GBF1Q92538 1859 aa19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 ZBBXA8MT70 800 aa19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 GRXCR1A8MXD5 290 aa19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 PIK3CDO00329 1044 aa19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 GGPS1O95749 300 aa19.23■□□□□ 0.67
TRAPPC1-201ENST00000303731 PSEN2P49810 448 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms