RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 CCDC157Q569K6 752 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 TYW1BQ6NUM6 668 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 C16orf62Q7Z3J2 963 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 SSH2Q76I76 1423 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 ARIH2O95376 493 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 NFKBIAP25963 317 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 PDE6CP51160 858 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 THOC5Q13769 683 aaKnown RBP13.06□□□□□ -0.32
PCF11-201ENST00000298281 CDC37L1Q7L3B6 337 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 MYRIPQ8NFW9 859 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 WDR64B1ANS9 1081 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 OTUD7BQ6GQQ9 843 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 MAP7D3Q8IWC1 876 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 NELFCDQ8IXH7 590 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 DNAAF3Q8N9W5 541 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 ENOX1Q8TC92 643 aaKnown RBP13.06□□□□□ -0.32
PCF11-201ENST00000298281 TSC1Q92574 1164 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 FAM207AQ9NSI2 230 aaPredicted RBP13.06□□□□□ -0.32
PCF11-201ENST00000298281 ARHGEF12Q9NZN5 1544 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 NPC1L1Q9UHC9 1359 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 EFCAB8A8MWE9 144 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 CTNNA1P35221 906 aaKnown RBP13.06□□□□□ -0.32
PCF11-201ENST00000298281 APBA1Q02410 837 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 GPBP1Q86WP2 473 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 PHKBQ93100 1093 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 JPH2Q9BR39 696 aaPredicted RBP13.06□□□□□ -0.32
PCF11-201ENST00000298281 EFHD1Q9BUP0 239 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 GSNP06396 782 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 ATP1A2P50993 1020 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 MTX1Q13505 466 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 CCDC92Q53HC0 331 aaPredicted RBP13.06□□□□□ -0.32
PCF11-201ENST00000298281 CENPAP49450 140 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 PSMD2Q13200 908 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 AARS2Q5JTZ9 985 aaKnown RBP13.06□□□□□ -0.32
PCF11-201ENST00000298281 NCAPG2Q86XI2 1143 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 FAM178BQ8IXR5 827 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 TRIM45Q9H8W5 580 aaPredicted RBP13.06□□□□□ -0.32
PCF11-201ENST00000298281 ZNF212Q9UDV6 495 aa13.06□□□□□ -0.32
PCF11-201ENST00000298281 DIAPH2O60879 1101 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 INHBAP08476 426 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 DMP1Q13316 513 aaPredicted RBP13.05□□□□□ -0.32
PCF11-201ENST00000298281 EXOC8Q8IYI6 725 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 ZFP42Q96MM3 310 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 LSM14BQ9BX40 385 aaKnown RBP13.05□□□□□ -0.32
PCF11-201ENST00000298281 PSTPIP2Q9H939 334 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 UHRF1BP1Q6BDS2 1440 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 GOLGA8KD6RF30 607 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 FOSP01100 380 aaPredicted RBP13.05□□□□□ -0.32
PCF11-201ENST00000298281 RCSD1Q6JBY9 416 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 ARMC9Q7Z3E5 817 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 DPP9Q86TI2 863 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 TGFBRAP1Q8WUH2 860 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 RIPOR2Q9Y4F9 1068 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 KRIT1O00522 736 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 CHL1O00533 1208 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 CARSP49589 748 aaKnown RBP13.05□□□□□ -0.32
PCF11-201ENST00000298281 TADA2BQ86TJ2 420 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 BLIDQ8IZY5 108 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 NCLNQ969V3 563 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 SUGCTQ9HAC7 445 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 ABT1Q9ULW3 272 aaKnown RBP13.05□□□□□ -0.32
PCF11-201ENST00000298281 RPS8P62241 208 aaKnown RBP13.05□□□□□ -0.32
PCF11-201ENST00000298281 ATG16L1Q676U5 607 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 NDUFAF2Q8N183 169 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 FAM227BQ96M60 508 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 SLC38A10Q9HBR0 1119 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 KIAA1468Q9P260 1216 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 POLR2MP0CAP2 368 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 HOXA7P31268 230 aaPredicted RBP13.05□□□□□ -0.32
PCF11-201ENST00000298281 MAPKAPK5Q8IW41 473 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 TRIM42Q8IWZ5 723 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 U2AF1L4Q8WU68 220 aaKnown RBP13.05□□□□□ -0.32
PCF11-201ENST00000298281 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.05□□□□□ -0.32
PCF11-201ENST00000298281 STX18Q9P2W9 335 aaKnown RBP13.05□□□□□ -0.32
PCF11-201ENST00000298281 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 TMCC1O94876 653 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 CPA1P15085 419 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 IMPG1Q17R60 797 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 TMTC3Q6ZXV5 915 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 HAUS4Q9H6D7 363 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 PIDD1Q9HB75 910 aa13.05□□□□□ -0.32
PCF11-201ENST00000298281 ASXL2Q76L83 1435 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 E7EWF7 191 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 ABCB4P21439 1286 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 CYP2J2P51589 502 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 PPARAQ07869 468 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 CHMP1BQ7LBR1 199 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 NLRC4Q9NPP4 1024 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 SYCP2Q9BX26 1530 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 PDE1BQ01064 536 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 NSUN2Q08J23 767 aaKnown RBP eCLIP13.04□□□□□ -0.32
PCF11-201ENST00000298281 STX19Q8N4C7 294 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 AP5M1Q9H0R1 490 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 KCNJ18B7U540 433 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 PPARGP37231 505 aaPredicted RBP13.04□□□□□ -0.32
PCF11-201ENST00000298281 BFSP1Q12934 665 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 KCNJ12Q14500 433 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 ELF2Q15723 593 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 ARHGAP27Q6ZUM4 889 aa13.04□□□□□ -0.32
PCF11-201ENST00000298281 NOSTRINQ8IVI9 506 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms