RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 SETQ01105 290 aaPredicted RBP21.23■□□□□ 0.99
VBP1-201ENST00000286428 PSMD2Q13200 908 aa21.23■□□□□ 0.99
VBP1-201ENST00000286428 COBLL1Q53SF7 1204 aa21.23■□□□□ 0.99
VBP1-201ENST00000286428 KRT26Q7Z3Y9 468 aa21.23■□□□□ 0.99
VBP1-201ENST00000286428 FILIP1Q7Z7B0 1213 aa21.23■□□□□ 0.99
VBP1-201ENST00000286428 CCDC84Q86UT8 332 aaPredicted RBP21.23■□□□□ 0.99
VBP1-201ENST00000286428 ZNF830Q96NB3 372 aaPredicted RBP21.23■□□□□ 0.99
VBP1-201ENST00000286428 PNMA5Q96PV4 448 aa21.23■□□□□ 0.99
VBP1-201ENST00000286428 MAF1Q9H063 256 aa21.23■□□□□ 0.99
VBP1-201ENST00000286428 RTN4Q9NQC3 1192 aaKnown RBP21.23■□□□□ 0.99
VBP1-201ENST00000286428 CD44P16070 742 aaKnown RBP21.22■□□□□ 0.99
VBP1-201ENST00000286428 GHRHRQ02643 423 aa21.22■□□□□ 0.99
VBP1-201ENST00000286428 PDE4DQ08499 809 aa21.22■□□□□ 0.99
VBP1-201ENST00000286428 SAMD1Q6SPF0 538 aaPredicted RBP21.22■□□□□ 0.99
VBP1-201ENST00000286428 UNC13DQ70J99 1090 aa21.22■□□□□ 0.99
VBP1-201ENST00000286428 LRRC8AQ8IWT6 810 aa21.22■□□□□ 0.99
VBP1-201ENST00000286428 RBM46Q8TBY0 533 aaKnown RBP21.22■□□□□ 0.99
VBP1-201ENST00000286428 NOC3LQ8WTT2 800 aaKnown RBP21.22■□□□□ 0.99
VBP1-201ENST00000286428 RPAP3Q9H6T3 665 aaPredicted RBP21.22■□□□□ 0.99
VBP1-201ENST00000286428 EMILIN3Q9NT22 766 aa21.22■□□□□ 0.99
VBP1-201ENST00000286428 TMOD4Q9NZQ9 345 aa21.22■□□□□ 0.99
VBP1-201ENST00000286428 KLRC4O43908 158 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 HSD17B4P51659 736 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 SULF1Q8IWU6 871 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 TRMT44Q8IYL2 757 aaKnown RBP21.21■□□□□ 0.99
VBP1-201ENST00000286428 ADSSL1Q8N142 457 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 NELFBQ8WX92 580 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 BLOC1S4Q9NUP1 217 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 NRBP1Q9UHY1 535 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 CTNND2Q9UQB3 1225 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 ZHX2Q9Y6X8 837 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 DICER1Q9UPY3 1922 aaKnown RBP21.21■□□□□ 0.99
VBP1-201ENST00000286428 FAM86B1E9PN63 330 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 FAM86B2P0C5J1 330 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 PRCPP42785 496 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 HIRAP54198 1017 aaPredicted RBP21.21■□□□□ 0.99
VBP1-201ENST00000286428 OAZ1P54368 228 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 TMC6Q7Z403 805 aa21.21■□□□□ 0.99
VBP1-201ENST00000286428 PPP1R12BO60237 982 aaPredicted RBP21.2■□□□□ 0.98
VBP1-201ENST00000286428 DDNO94850 711 aaPredicted RBP21.2■□□□□ 0.98
VBP1-201ENST00000286428 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.2■□□□□ 0.98
VBP1-201ENST00000286428 SMYD4Q8IYR2 804 aaPredicted RBP21.2■□□□□ 0.98
VBP1-201ENST00000286428 ZKSCAN4Q969J2 545 aaPredicted RBP21.2■□□□□ 0.98
VBP1-201ENST00000286428 LENG9Q96B70 501 aa21.2■□□□□ 0.98
VBP1-201ENST00000286428 P2RX7Q99572 595 aaKnown RBP21.2■□□□□ 0.98
VBP1-201ENST00000286428 ATAD5Q96QE3 1844 aa21.19■□□□□ 0.98
VBP1-201ENST00000286428 MSH4O15457 936 aa21.19■□□□□ 0.98
VBP1-201ENST00000286428 RPA1P27694 616 aa21.19■□□□□ 0.98
VBP1-201ENST00000286428 MCM6Q14566 821 aa21.19■□□□□ 0.98
VBP1-201ENST00000286428 CEP55Q53EZ4 464 aa21.19■□□□□ 0.98
VBP1-201ENST00000286428 CDKAL1Q5VV42 579 aa21.19■□□□□ 0.98
VBP1-201ENST00000286428 KIAA1524Q8TCG1 905 aa21.19■□□□□ 0.98
VBP1-201ENST00000286428 AGBL1Q96MI9 1066 aa21.19■□□□□ 0.98
VBP1-201ENST00000286428 KCNF1Q9H3M0 494 aa21.19■□□□□ 0.98
VBP1-201ENST00000286428 SAMSN1Q9NSI8 373 aaKnown RBP21.19■□□□□ 0.98
VBP1-201ENST00000286428 ZNF536O15090 1300 aa21.19■□□□□ 0.98
VBP1-201ENST00000286428 KIF20AO95235 890 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 MUTP22033 750 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 SFPQP23246 707 aaKnown RBP eCLIP21.18■□□□□ 0.98
VBP1-201ENST00000286428 STX17P56962 302 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 NOLC1Q14978 699 aaKnown RBP eCLIP21.18■□□□□ 0.983e-14■■■□□ 14.8
VBP1-201ENST00000286428 VSTM4Q8IW00 320 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 WDR11Q9BZH6 1224 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 DNM3Q9UQ16 869 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 MAP3K9P80192 1104 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 COG2Q14746 738 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 CCDC144BQ3MJ40 725 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 NIPA1Q7RTP0 329 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 CPXCR1Q8N123 301 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 MED15Q96RN5 788 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 POLR3CQ9BUI4 534 aaPredicted RBP21.18■□□□□ 0.98
VBP1-201ENST00000286428 HOXC10Q9NYD6 342 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 KIAA1024Q9UPX6 916 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 GDAQ9Y2T3 454 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 MYPNQ86TC9 1320 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 MYH7BA7E2Y1 1941 aa21.18■□□□□ 0.98
VBP1-201ENST00000286428 IGLV3-22A0A075B6J6 115 aa21.17■□□□□ 0.98
VBP1-201ENST00000286428 MYMKA6NI61 221 aa21.17■□□□□ 0.98
VBP1-201ENST00000286428 LRRC10BA6NIK2 292 aa21.17■□□□□ 0.98
VBP1-201ENST00000286428 VWA5AO00534 786 aa21.17■□□□□ 0.98
VBP1-201ENST00000286428 FGFR1OPO95684 399 aaKnown RBP21.17■□□□□ 0.98
VBP1-201ENST00000286428 ALAS1P13196 640 aa21.17■□□□□ 0.98
VBP1-201ENST00000286428 NF2P35240 595 aa21.17■□□□□ 0.98
VBP1-201ENST00000286428 C9orf131Q5VYM1 1079 aa21.17■□□□□ 0.98
VBP1-201ENST00000286428 NCAPH2Q6IBW4 605 aa21.17■□□□□ 0.98
VBP1-201ENST00000286428 USP50Q70EL3 339 aaPredicted RBP21.17■□□□□ 0.98
VBP1-201ENST00000286428 FAM114A1Q8IWE2 563 aa21.17■□□□□ 0.98
VBP1-201ENST00000286428 CCDC112Q8NEF3 446 aa21.17■□□□□ 0.98
VBP1-201ENST00000286428 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.17■□□□□ 0.98
VBP1-201ENST00000286428 ZC3H15Q8WU90 426 aaKnown RBP21.17■□□□□ 0.98
VBP1-201ENST00000286428 CACTINQ8WUQ7 758 aaKnown RBP21.17■□□□□ 0.98
VBP1-201ENST00000286428 DDX12PQ92771 950 aa21.17■□□□□ 0.98
VBP1-201ENST00000286428 NUDT12Q9BQG2 462 aa21.17■□□□□ 0.98
VBP1-201ENST00000286428 A0A1B0GTH6 734 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 TPM2P07951 284 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 BCRP11274 1271 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 CCNE1P24864 410 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 SPIRE1Q08AE8 756 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 NR1I3Q14994 352 aa21.16■□□□□ 0.98
VBP1-201ENST00000286428 TKFCQ3LXA3 575 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms