RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 LRRN2O75325 713 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 LMNB1P20700 586 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 ADD2P35612 726 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 DYNLL1P63167 89 aaKnown RBP17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 CYP4F22Q6NT55 531 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 TOGARAM2Q6ZUX3 1019 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 FBXO11Q86XK2 927 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 TRPC6Q9Y210 931 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 MRFAP1Q9Y605 127 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 CCDC125Q86Z20 511 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 SCYL3Q8IZE3 742 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 CHURC1Q8WUH1 139 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 KCNF1Q9H3M0 494 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 BCAP29Q9UHQ4 241 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 STAM2O75886 525 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 TCP11X2Q5H9J9 407 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 SCNN1DP51172 638 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 YWHAGP61981 247 aaKnown RBP eCLIP17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 PRKG1Q13976 671 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 MAP3K21Q5TCX8 1036 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 ADAMTS12P58397 1594 aa17.9■□□□□ 0.46
SH3RF1-201ENST00000284637 TOM1O60784 492 aa17.89■□□□□ 0.46
SH3RF1-201ENST00000284637 TADA3O75528 432 aa17.89■□□□□ 0.46
SH3RF1-201ENST00000284637 MYL7Q01449 175 aa17.89■□□□□ 0.46
SH3RF1-201ENST00000284637 PTPN12Q05209 780 aaKnown RBP17.89■□□□□ 0.46
SH3RF1-201ENST00000284637 KRT31Q15323 416 aa17.89■□□□□ 0.46
SH3RF1-201ENST00000284637 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.89■□□□□ 0.46
SH3RF1-201ENST00000284637 GLG1Q92896 1179 aa17.89■□□□□ 0.46
SH3RF1-201ENST00000284637 TEKT1Q969V4 418 aa17.89■□□□□ 0.46
SH3RF1-201ENST00000284637 CDCA7Q9BWT1 371 aaPredicted RBP17.89■□□□□ 0.46
SH3RF1-201ENST00000284637 KLC4Q9NSK0 619 aa17.89■□□□□ 0.46
SH3RF1-201ENST00000284637 ABCC12Q96J65 1359 aa17.89■□□□□ 0.45
SH3RF1-201ENST00000284637 LAD1O00515 517 aa17.89■□□□□ 0.45
SH3RF1-201ENST00000284637 BBOF1Q8ND07 529 aa17.89■□□□□ 0.45
SH3RF1-201ENST00000284637 Q9H521 79 aa17.89■□□□□ 0.45
SH3RF1-201ENST00000284637 ALAS1P13196 640 aa17.89■□□□□ 0.45
SH3RF1-201ENST00000284637 SEPT2Q15019 361 aa17.89■□□□□ 0.45
SH3RF1-201ENST00000284637 FBXO41Q8TF61 875 aa17.89■□□□□ 0.45
SH3RF1-201ENST00000284637 PCDHA13Q9Y5I0 950 aa17.89■□□□□ 0.45
SH3RF1-201ENST00000284637 MAD1L1Q9Y6D9 718 aa17.89■□□□□ 0.45
SH3RF1-201ENST00000284637 TMEM232C9JQI7 657 aa17.89■□□□□ 0.45
SH3RF1-201ENST00000284637 TSPYL2Q9H2G4 693 aaPredicted RBP17.89■□□□□ 0.45
SH3RF1-201ENST00000284637 KDM5CP41229 1560 aa17.89■□□□□ 0.45
SH3RF1-201ENST00000284637 CLIC2O15247 247 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 MFAP3LO75121 409 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 SERPINB6P35237 376 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 YARSP54577 528 aaKnown RBP17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 RPS6KA2Q15349 733 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 NBPF10Q6P3W6 841 aaKnown RBP17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 TBCKQ8TEA7 893 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 AK8Q96MA6 479 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 ZDHHC9Q9Y397 364 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 AFPP02771 609 aaKnown RBP17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 POLR2MP0CAP2 368 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 CCNE1P24864 410 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 KIF11P52732 1056 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 RCN2Q14257 317 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 LCORLQ8N3X6 602 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 AP1M1Q9BXS5 423 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 TBK1Q9UHD2 729 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 DYNC1I2Q13409 638 aaKnown RBP17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 TBC1D10BQ4KMP7 808 aaPredicted RBP17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 BATF3Q9NR55 127 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 THEGQ9P2T0 379 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 RNF14Q9UBS8 474 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 NFU1Q9UMS0 254 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 PCP11498 1178 aaKnown RBP17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 TOB2Q14106 344 aaPredicted RBP17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 POLA2Q14181 598 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 TBC1D1Q86TI0 1168 aaPredicted RBP17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 LARGE2Q8N3Y3 721 aa17.88■□□□□ 0.45
SH3RF1-201ENST00000284637 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 DNAJC8O75937 253 aaPredicted RBP17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 GFPT2O94808 682 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 YWHAEP62258 255 aaKnown RBP17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 TTBK2Q6IQ55 1244 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 AATKQ6ZMQ8 1374 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 PARP9Q8IXQ6 854 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 DISP1Q96F81 1524 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 MAP3K15Q6ZN16 1313 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 SAT1P21673 171 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 GABPAQ06546 454 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 SLFN13Q68D06 897 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 EPC1Q9H2F5 836 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 GCC2Q8IWJ2 1684 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 SRGAP2O75044 1071 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 CERKLQ49MI3 558 aaPredicted RBP17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 FAM186BQ8IYM0 893 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 ZNF653Q96CK0 615 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 CARD10Q9BWT7 1032 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 CYP2E1P05181 493 aaPredicted RBP17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 TMOD1P28289 359 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 CCDC117Q8IWD4 279 aaPredicted RBP17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 WHAMMQ8TF30 809 aa17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 ABTB1Q969K4 478 aaPredicted RBP17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.87■□□□□ 0.45
SH3RF1-201ENST00000284637 ICA1Q05084 483 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 TEKT3Q9BXF9 490 aa17.86■□□□□ 0.45
SH3RF1-201ENST00000284637 IGSF1Q8N6C5 1336 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms