RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 WNT7AO00755 349 aa17.83■□□□□ 0.45
GPC1-201ENST00000264039 ATP6V1G2O95670 118 aa17.83■□□□□ 0.45
GPC1-201ENST00000264039 PDIA6Q15084 440 aa17.83■□□□□ 0.45
GPC1-201ENST00000264039 RNF10Q8N5U6 811 aaKnown RBP17.83■□□□□ 0.45
GPC1-201ENST00000264039 STRBPQ96SI9 672 aaKnown RBP17.83■□□□□ 0.45
GPC1-201ENST00000264039 OSBPL1AQ9BXW6 950 aa17.83■□□□□ 0.45
GPC1-201ENST00000264039 OSBPL7Q9BZF2 842 aa17.83■□□□□ 0.45
GPC1-201ENST00000264039 SNX24Q9Y343 169 aa17.83■□□□□ 0.45
GPC1-201ENST00000264039 NAPAP54920 295 aa17.83■□□□□ 0.44
GPC1-201ENST00000264039 STK4Q13043 487 aa17.83■□□□□ 0.44
GPC1-201ENST00000264039 GLE1Q53GS7 698 aaKnown RBP17.83■□□□□ 0.44
GPC1-201ENST00000264039 GREM2Q9H772 168 aa17.83■□□□□ 0.44
GPC1-201ENST00000264039 PTPN22Q9Y2R2 807 aa17.83■□□□□ 0.44
GPC1-201ENST00000264039 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.83■□□□□ 0.44
GPC1-201ENST00000264039 USH1CQ9Y6N9 552 aa17.83■□□□□ 0.44
GPC1-201ENST00000264039 SART1O43290 800 aaKnown RBP17.83■□□□□ 0.44
GPC1-201ENST00000264039 CHN1P15882 459 aa17.83■□□□□ 0.44
GPC1-201ENST00000264039 SKOR1P84550 965 aa17.83■□□□□ 0.44
GPC1-201ENST00000264039 SV2BQ7L1I2 683 aa17.83■□□□□ 0.44
GPC1-201ENST00000264039 PRMT1Q99873 361 aaKnown RBP17.83■□□□□ 0.44
GPC1-201ENST00000264039 TRIM4Q9C037 500 aa17.83■□□□□ 0.44
GPC1-201ENST00000264039 NMT2O60551 498 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 UQCRFS1P1P0C7P4 283 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 PLCG1P19174 1290 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 CCNE1P24864 410 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 CNNM4Q6P4Q7 775 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 SPATA5Q8NB90 893 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 CAND2O75155 1236 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 ECT2Q9H8V3 914 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 DISC1Q9NRI5 854 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 FAM217BQ9NTX9 383 aaPredicted RBP17.82■□□□□ 0.44
GPC1-201ENST00000264039 ARHGAP20Q9P2F6 1191 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 MAGEB6P1A0A0J9YX57 407 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 CCDC160A6NGH7 325 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 GOLGA8HP0CJ92 632 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 KLRC1P26715 233 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 IFI16Q16666 785 aaKnown RBP17.82■□□□□ 0.44
GPC1-201ENST00000264039 GRIPAP1Q4V328 841 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 TRIM51Q9BSJ1 452 aa17.82■□□□□ 0.44
GPC1-201ENST00000264039 CCT8L1PA6NM43 557 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 TTI1O43156 1089 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 PBX1P40424 430 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 FNTAP49354 379 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 ZNF131P52739 623 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 FOXO4P98177 505 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 NT5DC1Q5TFE4 455 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 APTXQ7Z2E3 356 aaKnown RBP17.81■□□□□ 0.44
GPC1-201ENST00000264039 ADSSL1Q8N142 457 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 U2AF1L4Q8WU68 220 aaKnown RBP17.81■□□□□ 0.44
GPC1-201ENST00000264039 FMO2Q99518 471 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 DNAJC7Q99615 494 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 RNF26Q9BY78 433 aaPredicted RBP17.81■□□□□ 0.44
GPC1-201ENST00000264039 THAP9Q9H5L6 903 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 AZI2Q9H6S1 392 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 TRPC6Q9Y210 931 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 CPDO75976 1380 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 SRGNP10124 158 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 DDR1Q08345 913 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 SETDB1Q15047 1291 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 TRIM7Q9C029 511 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 RTL9Q8NET4 1388 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 PALLDQ8WX93 1383 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 IRS4O14654 1257 aaPredicted RBP17.81■□□□□ 0.44
GPC1-201ENST00000264039 BCAMP50895 628 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 RPUSD2Q8IZ73 545 aaKnown RBP17.81■□□□□ 0.44
GPC1-201ENST00000264039 CPVLQ9H3G5 476 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 INTUQ9ULD6 942 aa17.81■□□□□ 0.44
GPC1-201ENST00000264039 PXDNLA1KZ92 1463 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 IGF2BP3O00425 579 aaKnown RBP eCLIP17.8■□□□□ 0.44
GPC1-201ENST00000264039 CALML3P27482 149 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 GBP1P32455 592 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 STX2P32856 288 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 ZNF211Q13398 564 aaPredicted RBP17.8■□□□□ 0.44
GPC1-201ENST00000264039 PPP4R3AQ6IN85 833 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 SLC30A9Q6PML9 568 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 ATP6V0A4Q9HBG4 840 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 USP17L12C9JPN9 530 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 USP17L21D6R901 530 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 SCG2P13521 617 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 RASIP1Q5U651 963 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 CAPN12Q6ZSI9 719 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 TLR10Q9BXR5 811 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 MTRF1LQ9UGC7 380 aaKnown RBP17.8■□□□□ 0.44
GPC1-201ENST00000264039 hCG_2014768A0A024R1R8 64 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 DCDC2CA8MYV0 355 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 PGRMC1O00264 195 aaKnown RBP17.8■□□□□ 0.44
GPC1-201ENST00000264039 VWA3BQ502W6 1294 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 EGFL6Q8IUX8 553 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 LRRC34Q8IZ02 419 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 BLIDQ8IZY5 108 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 XPO6Q96QU8 1125 aaKnown RBP17.8■□□□□ 0.44
GPC1-201ENST00000264039 ZSCAN10Q96SZ4 725 aaPredicted RBP17.8■□□□□ 0.44
GPC1-201ENST00000264039 ETNK1Q9HBU6 452 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 KLHL14Q9P2G3 628 aa17.8■□□□□ 0.44
GPC1-201ENST00000264039 A0A1W2PQC6 194 aa17.79■□□□□ 0.44
GPC1-201ENST00000264039 EME2A4GXA9 379 aaPredicted RBP17.79■□□□□ 0.44
GPC1-201ENST00000264039 AGAP11Q8TF27 550 aa17.79■□□□□ 0.44
GPC1-201ENST00000264039 SUN1O94901 812 aa17.79■□□□□ 0.44
GPC1-201ENST00000264039 FGGP02679 453 aa17.79■□□□□ 0.44
GPC1-201ENST00000264039 ELF3P78545 371 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms