RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 TBC1D5Q92609 795 aa16.18■□□□□ 0.18
DDX39A-201ENST00000242776 TGS1Q96RS0 853 aaKnown RBP16.18■□□□□ 0.18
DDX39A-201ENST00000242776 MUC6Q6W4X9 2439 aa16.18■□□□□ 0.18
DDX39A-201ENST00000242776 LINC01553A4QN01 128 aa16.17■□□□□ 0.18
DDX39A-201ENST00000242776 PI4K2BG5E9Z4 385 aa16.17■□□□□ 0.18
DDX39A-201ENST00000242776 CKBP12277 381 aa16.17■□□□□ 0.18
DDX39A-201ENST00000242776 EDNRBP24530 442 aa16.17■□□□□ 0.18
DDX39A-201ENST00000242776 KAT2BQ92831 832 aa16.17■□□□□ 0.18
DDX39A-201ENST00000242776 TAAR1Q96RJ0 339 aa16.17■□□□□ 0.18
DDX39A-201ENST00000242776 C17orf80Q9BSJ5 609 aa16.17■□□□□ 0.18
DDX39A-201ENST00000242776 UBA5Q9GZZ9 404 aa16.17■□□□□ 0.18
DDX39A-201ENST00000242776 HDAC6Q9UBN7 1215 aa16.17■□□□□ 0.18
DDX39A-201ENST00000242776 TTC41PQ6P2S7 1318 aa16.17■□□□□ 0.18
DDX39A-201ENST00000242776 LOC102724159A0A0B4J2E5 919 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 ORC4O43929 436 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 GJB5O95377 273 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 GH1P01241 217 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 ZNF286BP0CG31 522 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 ZNF200P98182 395 aaPredicted RBP16.16■□□□□ 0.18
DDX39A-201ENST00000242776 PWP2Q15269 919 aaKnown RBP16.16■□□□□ 0.18
DDX39A-201ENST00000242776 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.16■□□□□ 0.181e-6■■■■□ 20.8
DDX39A-201ENST00000242776 GJD3Q8N144 294 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 C7orf31Q8N865 590 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 DNERQ8NFT8 737 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.16■□□□□ 0.18
DDX39A-201ENST00000242776 RAD9AQ99638 391 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 ZKSCAN3Q9BRR0 538 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 ANAPC4Q9UJX5 808 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 CASTP20810 708 aaKnown RBP16.16■□□□□ 0.18
DDX39A-201ENST00000242776 NOVP48745 357 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 ERVK-21P61565 698 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 ARHGAP1Q07960 439 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 ZNF543Q08ER8 600 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 PTCRAQ6ISU1 281 aaPredicted RBP16.16■□□□□ 0.18
DDX39A-201ENST00000242776 CCDC62Q6P9F0 684 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 WNT8BQ93098 351 aa16.16■□□□□ 0.18
DDX39A-201ENST00000242776 ARIH1Q9Y4X5 557 aaPredicted RBP16.16■□□□□ 0.18
DDX39A-201ENST00000242776 MICAL3Q7RTP6 2002 aa16.15■□□□□ 0.18
DDX39A-201ENST00000242776 B4DLN1 442 aa16.15■□□□□ 0.18
DDX39A-201ENST00000242776 H3BQ06 376 aaPredicted RBP16.15■□□□□ 0.18
DDX39A-201ENST00000242776 PSEN2P49810 448 aa16.15■□□□□ 0.18
DDX39A-201ENST00000242776 MRPL12P52815 198 aaKnown RBP16.15■□□□□ 0.18
DDX39A-201ENST00000242776 IKBKEQ14164 716 aa16.15■□□□□ 0.18
DDX39A-201ENST00000242776 ZNF618Q5T7W0 954 aa16.15■□□□□ 0.18
DDX39A-201ENST00000242776 ANKRD45Q5TZF3 282 aa16.15■□□□□ 0.18
DDX39A-201ENST00000242776 FAM178BQ8IXR5 827 aa16.15■□□□□ 0.18
DDX39A-201ENST00000242776 FBXO22Q8NEZ5 403 aa16.15■□□□□ 0.18
DDX39A-201ENST00000242776 LMCD1Q9NZU5 365 aa16.15■□□□□ 0.18
DDX39A-201ENST00000242776 COL20A1Q9P218 1284 aa16.15■□□□□ 0.18
DDX39A-201ENST00000242776 GTF2IRD1Q9UHL9 959 aa16.15■□□□□ 0.18
DDX39A-201ENST00000242776 ABHD14A-ACY1A0A1B0GW23 586 aa16.14■□□□□ 0.17
DDX39A-201ENST00000242776 EIF2AK2P19525 551 aaKnown RBP16.14■□□□□ 0.17
DDX39A-201ENST00000242776 MX1P20591 662 aa16.14■□□□□ 0.17
DDX39A-201ENST00000242776 CSPP1Q1MSJ5 1256 aa16.14■□□□□ 0.17
DDX39A-201ENST00000242776 LEXMQ3ZCV2 418 aa16.14■□□□□ 0.17
DDX39A-201ENST00000242776 MYOCDQ8IZQ8 938 aa16.14■□□□□ 0.17
DDX39A-201ENST00000242776 FAM227BQ96M60 508 aa16.14■□□□□ 0.17
DDX39A-201ENST00000242776 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.13■□□□□ 0.17
DDX39A-201ENST00000242776 FGAP02671 866 aa16.13■□□□□ 0.17
DDX39A-201ENST00000242776 CXCL10P02778 98 aa16.13■□□□□ 0.17
DDX39A-201ENST00000242776 NUCB1Q02818 461 aa16.13■□□□□ 0.17
DDX39A-201ENST00000242776 MBTPS1Q14703 1052 aa16.13■□□□□ 0.17
DDX39A-201ENST00000242776 MFSD10Q14728 455 aa16.13■□□□□ 0.17
DDX39A-201ENST00000242776 CDC37Q16543 378 aaPredicted RBP16.13■□□□□ 0.17
DDX39A-201ENST00000242776 DGKDQ16760 1214 aa16.13■□□□□ 0.17
DDX39A-201ENST00000242776 KIAA0753Q2KHM9 967 aa16.13■□□□□ 0.17
DDX39A-201ENST00000242776 SESTD1Q86VW0 696 aa16.13■□□□□ 0.17
DDX39A-201ENST00000242776 DHX37Q8IY37 1157 aaKnown RBP16.13■□□□□ 0.17
DDX39A-201ENST00000242776 SYTL5Q8TDW5 730 aaPredicted RBP16.13■□□□□ 0.17
DDX39A-201ENST00000242776 NLRC5Q86WI3 1866 aa16.13■□□□□ 0.17
DDX39A-201ENST00000242776 WDR19Q8NEZ3 1342 aa16.13■□□□□ 0.17
DDX39A-201ENST00000242776 DHX16O60231 1041 aaKnown RBP16.12■□□□□ 0.17
DDX39A-201ENST00000242776 HIC1Q14526 733 aa16.12■□□□□ 0.17
DDX39A-201ENST00000242776 ARHGEF16Q5VV41 709 aa16.12■□□□□ 0.17
DDX39A-201ENST00000242776 RMDN3Q96TC7 470 aa16.12■□□□□ 0.17
DDX39A-201ENST00000242776 VAT1LQ9HCJ6 419 aa16.12■□□□□ 0.17
DDX39A-201ENST00000242776 A0A0D9SFI3 127 aa16.11■□□□□ 0.17
DDX39A-201ENST00000242776 PRR33A8MZF0 331 aa16.11■□□□□ 0.17
DDX39A-201ENST00000242776 UPP2O95045 317 aa16.11■□□□□ 0.17
DDX39A-201ENST00000242776 CSPG5O95196 566 aa16.11■□□□□ 0.17
DDX39A-201ENST00000242776 FGRP09769 529 aa16.11■□□□□ 0.17
DDX39A-201ENST00000242776 STXBP2Q15833 593 aa16.11■□□□□ 0.17
DDX39A-201ENST00000242776 CHD1LQ86WJ1 897 aa16.11■□□□□ 0.17
DDX39A-201ENST00000242776 NSUN6Q8TEA1 469 aaKnown RBP16.11■□□□□ 0.17
DDX39A-201ENST00000242776 ZFP91Q96JP5 570 aaPredicted RBP16.11■□□□□ 0.17
DDX39A-201ENST00000242776 TCP11L1Q9NUJ3 509 aa16.11■□□□□ 0.17
DDX39A-201ENST00000242776 PNMA2Q9UL42 364 aa16.11■□□□□ 0.17
DDX39A-201ENST00000242776 MRVI1Q9Y6F6 885 aa16.11■□□□□ 0.17
DDX39A-201ENST00000242776 LGR5O75473 907 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 AMHP03971 560 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 THPOP40225 353 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 PTK7Q13308 1070 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 TRIM71Q2Q1W2 868 aaKnown RBP16.1■□□□□ 0.17
DDX39A-201ENST00000242776 TRAF7Q6Q0C0 670 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 ZNF589Q86UQ0 364 aaPredicted RBP16.1■□□□□ 0.17
DDX39A-201ENST00000242776 TBC1D10CQ8IV04 446 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 DBF4BQ8NFT6 615 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 DDX41Q9UJV9 622 aaKnown RBP16.1■□□□□ 0.17
DDX39A-201ENST00000242776 INSL6Q9Y581 213 aa16.1■□□□□ 0.17
DDX39A-201ENST00000242776 MYO7AQ13402 2215 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms