RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Idi1P58044 227 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Krt26Q3TRJ4 462 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Atg16l1Q8C0J2 607 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Ifi35Q9D8C4 286 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Rmdn1Q9DCV4 305 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 A0A286YCQ6 122 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Mdh1P14152 334 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Hspa1lP16627 641 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Anks1aP59672 1150 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Apol7eQ3UZ24 369 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Ncoa4Q5U4H9 625 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Hdac4Q6NZM9 1076 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 L3mbtl3Q8BLB7 883 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Pomgnt1Q91X88 660 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Nek8Q91ZR4 698 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 3830403N18RikQ9D6C3 208 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Adgrl1Q80TR1 1466 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Lrrc23O35125 340 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Rasgrf2P70392 1189 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 LrmpQ60664 539 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 PodnQ7TQ62 611 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Nek9Q8K1R7 984 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Ttll1Q91V51 423 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Prpf3Q922U1 683 aaKnown RBP13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Krt5Q922U2 580 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Wbp11Q923D5 641 aaKnown RBP13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Them5Q9CQJ0 248 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 4930449I24RikQ9D5E3 319 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Trmt112Q9DCG9 125 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Gm11985A0A1B0GS61 206 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 4930504O13RikQ8C5Z9 145 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Taco1Q8K0Z7 294 aaKnown RBP13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Rpap2Q8VC34 614 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Ppp2r5dQ91V89 594 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 TbcbQ9D1E6 244 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Klc4Q9DBS5 619 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Ppp1r3fQ9JIG4 799 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Krt27Q9Z320 448 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Krt78E9Q0F0 1068 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Arl4aP61213 200 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Adam1aQ60813 791 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 GartQ64737 1010 aa13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Ddx39aQ8VDW0 427 aaKnown RBP13.45□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Gimd1E9PW74 217 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Nlrp4cQ3TKR3 982 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Usp28Q5I043 1051 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 DbnlQ62418 436 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 AsphQ8BSY0 741 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Dtnbp1Q91WZ8 352 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Rmi1Q9D4G9 616 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Krt24A1L317 512 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Serpinb8O08800 374 aaKnown RBP13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 DnttP09838 530 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Mei4Q8BRM6 389 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 GlyctkQ8QZY2 523 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Snrnp35Q9D384 244 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Hdac6Q9Z2V5 1149 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Per2O54943 1257 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Kctd16Q5DTY9 427 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Actn1Q7TPR4 892 aaKnown RBP13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Znf467Q8JZL0 594 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Uhrf1bp1lA2RSJ4 1457 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Kcng1A2BDX4 514 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Prmt9Q3U3W5 846 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Eif4a3Q91VC3 411 aaKnown RBP13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Prpsap1Q9D0M1 356 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Dbn1Q9QXS6 706 aa13.44□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Qtrt2B8ZXI1 415 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Ccnyl1D3YUJ3 367 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Zbtb8osQ505B7 168 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Rsad1Q5SUV1 442 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Ripor2Q80U16 1078 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Rnf168Q80XJ2 565 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 MtbpQ8BJS8 894 aaKnown RBP13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Spats2lQ91WJ7 558 aaKnown RBP13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Snx1Q9WV80 522 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Cyth3O08967 399 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Nab2Q61127 525 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Git1Q68FF6 770 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Eif3cQ8R1B4 911 aaKnown RBP13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Telo2Q9DC40 840 aaKnown RBP13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Cyth1Q9QX11 398 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Ccdc138Q0VF22 680 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Ccdc33Q3ULW6 985 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Tgfb1i1Q62219 461 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Tbc1d30Q69ZT9 766 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Ccdc154Q6RUT8 657 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Dcaf5Q80T85 946 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Cog4Q8R1U1 785 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Tor1aip1Q921T2 595 aaKnown RBP13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Dnaaf1Q9D2H9 634 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Usp14Q9JMA1 493 aaKnown RBP13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Stk39Q9Z1W9 556 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 EsrraO08580 422 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Palb2Q3U0P1 1104 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Hps6Q8BLY7 805 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Rgs3Q9DC04 966 aa13.43□□□□□ -0.26
Ssh1-202ENSMUST00000112298 IkbkbO88351 757 aa13.42□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Wdr36Q3TAQ9 899 aaKnown RBP13.42□□□□□ -0.26
Ssh1-202ENSMUST00000112298 Phf20l1Q8CCJ9 1013 aa13.42□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 53.4 ms