RNA–Protein interactions for RNA: ENSMUST00000027068.10

Tram1-201, Transcript of Translocating chain-associated membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tram1, Length 2,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1-201ENSMUST00000027068 Ifih1Q8R5F7 1025 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 Ssr1Q9CY50 286 aaKnown RBP21.32■■□□□ 1
Tram1-201ENSMUST00000027068 GsdmeQ9Z2D3 512 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 NfrkbQ6PIJ4 1296 aaKnown RBP21.32■■□□□ 1
Tram1-201ENSMUST00000027068 Ublcp1Q8BGR9 318 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 Cacnb1Q8R3Z5 597 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 Klc3Q91W40 508 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 Tktl2Q9D4D4 627 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 Stk11Q9WTK7 436 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 GnaqP21279 359 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 Rps8P62242 208 aaKnown RBP21.32■■□□□ 1
Tram1-201ENSMUST00000027068 PtgdrP70263 357 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 Znf667Q2TL60 609 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 Fnbp1Q80TY0 616 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 Spats2Q8K1N4 545 aaKnown RBP21.32■■□□□ 1
Tram1-201ENSMUST00000027068 Ppp1r3gQ9CW07 347 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 Lrrc57Q9D1G5 239 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 Epb41l3Q9WV92 929 aa21.32■■□□□ 1
Tram1-201ENSMUST00000027068 P4hbP09103 509 aaKnown RBP21.31■■□□□ 1
Tram1-201ENSMUST00000027068 Acsbg2Q2XU92 667 aa21.31■■□□□ 1
Tram1-201ENSMUST00000027068 Mettl5Q8K1A0 209 aa21.31■■□□□ 1
Tram1-201ENSMUST00000027068 Creb3l3Q91XE9 479 aa21.31■■□□□ 1
Tram1-201ENSMUST00000027068 Sdccag8Q80UF4 717 aa21.31■■□□□ 1
Tram1-201ENSMUST00000027068 Slc51bQ80WK2 128 aa21.31■■□□□ 1
Tram1-201ENSMUST00000027068 Q8BWG4 1187 aa21.31■■□□□ 1
Tram1-201ENSMUST00000027068 Fermt3Q8K1B8 665 aa21.31■■□□□ 1
Tram1-201ENSMUST00000027068 Lgi2Q8K4Z0 550 aa21.31■■□□□ 1
Tram1-201ENSMUST00000027068 Rnf34Q99KR6 376 aa21.31■■□□□ 1
Tram1-201ENSMUST00000027068 Guca2bO09051 106 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Akr1b1P45376 316 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Lig3P97386 1015 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Hdgfl1Q2VPR5 283 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Mybpc2Q5XKE0 1136 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Armcx3Q8BHS6 379 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Lmbrd1Q8K0B2 537 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Vwa5aQ99KC8 793 aaKnown RBP21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Ca8P28651 291 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 PltpP55065 493 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Hnrnph2P70333 449 aaKnown RBP21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Rpusd2Q149F1 553 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Rnf207Q3V3A7 635 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 PdhbQ9D051 359 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Galntl5Q9D4M9 431 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Klc4Q9DBS5 619 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Sertad1Q9JL10 236 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Trim10Q9WUH5 489 aa21.3■■□□□ 1
Tram1-201ENSMUST00000027068 Wdr70Q3TWF6 657 aa21.29■■□□□ 1
Tram1-201ENSMUST00000027068 PRAG1Q571I4 1179 aa21.29■■□□□ 1
Tram1-201ENSMUST00000027068 Ift20Q61025 132 aa21.29■■□□□ 1
Tram1-201ENSMUST00000027068 Capn9Q9D805 690 aa21.29■■□□□ 1
Tram1-201ENSMUST00000027068 Smco2Q9DA21 347 aa21.29■■□□□ 1
Tram1-201ENSMUST00000027068 Gm28510A0A087WP28 240 aa21.29■■□□□ 1
Tram1-201ENSMUST00000027068 Samd15F6XZJ7 620 aa21.29■■□□□ 1
Tram1-201ENSMUST00000027068 Hnrnph1O35737 449 aaKnown RBP21.29■■□□□ 1
Tram1-201ENSMUST00000027068 Arhgap44Q5SSM3 814 aa21.29■■□□□ 1
Tram1-201ENSMUST00000027068 Sf3b3Q921M3 1217 aaKnown RBP21.29■■□□□ 1
Tram1-201ENSMUST00000027068 A430078G23RikE9Q7Y4 484 aa21.28■■□□□ 1
Tram1-201ENSMUST00000027068 Lrrc32G3XA59 663 aa21.28■■□□□ 1
Tram1-201ENSMUST00000027068 Rasa2P58069 847 aa21.28■■□□□ 1
Tram1-201ENSMUST00000027068 Tmprss11aQ3UQ41 389 aa21.28■■□□□ 1
Tram1-201ENSMUST00000027068 Ccdc172Q810N9 267 aa21.28■■□□□ 1
Tram1-201ENSMUST00000027068 Eif3hQ91WK2 352 aaKnown RBP21.28■■□□□ 1
Tram1-201ENSMUST00000027068 Kcnj11Q61743 390 aa21.28■■□□□ 1
Tram1-201ENSMUST00000027068 Gna15P30678 374 aa21.28■■□□□ 1
Tram1-201ENSMUST00000027068 Specc1Q5SXY1 1067 aa21.28■■□□□ 1
Tram1-201ENSMUST00000027068 Camsap3Q80VC9 1252 aa21.28■■□□□ 1
Tram1-201ENSMUST00000027068 Rassf2Q8BMS9 326 aa21.28■■□□□ 1
Tram1-201ENSMUST00000027068 Sde2Q8K1J5 448 aaKnown RBP21.28■■□□□ 1
Tram1-201ENSMUST00000027068 SetQ9EQU5 289 aaKnown RBP21.28■■□□□ 1
Tram1-201ENSMUST00000027068 Eif6O55135 245 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 XlrP05531 208 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 HelqQ2VPA6 1069 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 Dhx58Q99J87 678 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 Spata17Q9D552 379 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 Cep83Q9D5R3 692 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 DccP70211 1447 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 Rtkn2Q14B46 604 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 VrtnQ3SYK4 740 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 Spout1Q3UHX9 385 aaKnown RBP21.27■■□□□ 1
Tram1-201ENSMUST00000027068 Ddx49Q4FZF3 480 aaKnown RBP21.27■■□□□ 1
Tram1-201ENSMUST00000027068 PccaQ91ZA3 724 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 LrmdaQ9D9B4 229 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 Sept14Q9DA97 430 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 FignQ9ERZ6 759 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 Scgb2b12S4R2L0 112 aa21.27■■□□□ 1
Tram1-201ENSMUST00000027068 Ttc13A0A1L1SSC7 844 aa21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 Spocd1B1ASB6 936 aa21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 Gm1758F6VZZ1 202 aa21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 Sema3fO88632 785 aa21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 Npdc1Q64322 332 aa21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 Tsnaxip1Q99P25 704 aa21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 Btbd18A0A0A6YY25 723 aa21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 Eya3P97480 510 aa21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 March6Q6ZQ89 909 aa21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 Zbed4Q80WQ9 1168 aa21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 Ankrd23Q812A3 306 aa21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 Srp68Q8BMA6 625 aaKnown RBP21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 Onecut3Q8K557 490 aa21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 HibadhQ99L13 335 aaKnown RBP21.26■□□□□ 0.99
Tram1-201ENSMUST00000027068 Calr3Q9D9Q6 380 aa21.26■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 48.9 ms