RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W CRN1Q06440 651 aa2.2□□□□□ -2.06
MCD1YDL003W RAX1Q08760 435 aa2.2□□□□□ -2.06
MCD1YDL003W YDL109CQ12103 647 aa2.2□□□□□ -2.06
MCD1YDL003W YDR061WQ12298 539 aa2.2□□□□□ -2.06
MCD1YDL003W ATG31Q12421 196 aa2.2□□□□□ -2.06
MCD1YDL003W AHA1Q12449 350 aaKnown RBP2.2□□□□□ -2.06
MCD1YDL003W CMC2Q3E7A4 109 aa2.2□□□□□ -2.06
MCD1YDL003W DNF3Q12674 1656 aa2.2□□□□□ -2.06
MCD1YDL003W RRP5Q05022 1729 aaKnown RBP2.2□□□□□ -2.06
MCD1YDL003W ATP6P00854 259 aa2.2□□□□□ -2.06
MCD1YDL003W CHO2P05374 869 aaKnown RBP2.2□□□□□ -2.06
MCD1YDL003W EXO70P19658 623 aa2.2□□□□□ -2.06
MCD1YDL003W SFL1P20134 766 aa2.2□□□□□ -2.06
MCD1YDL003W VPS33P20795 691 aa2.2□□□□□ -2.06
MCD1YDL003W CBP3P21560 335 aa2.2□□□□□ -2.06
MCD1YDL003W OPI1P21957 404 aa2.2□□□□□ -2.06
MCD1YDL003W MRPL8P22353 238 aa2.2□□□□□ -2.06
MCD1YDL003W SNT1P25357 1226 aa2.2□□□□□ -2.06
MCD1YDL003W KRR1P25586 316 aaPredicted RBP2.2□□□□□ -2.06
MCD1YDL003W ICL1P28240 557 aaPredicted RBP2.2□□□□□ -2.06
MCD1YDL003W PEX3P28795 441 aa2.2□□□□□ -2.06
MCD1YDL003W DGR2P32330 852 aa2.2□□□□□ -2.06
MCD1YDL003W HXT1P32465 570 aa2.2□□□□□ -2.06
MCD1YDL003W XRS2P33301 854 aa2.2□□□□□ -2.06
MCD1YDL003W RRN3P36070 627 aa2.2□□□□□ -2.06
MCD1YDL003W NUP133P36161 1157 aa2.2□□□□□ -2.06
MCD1YDL003W TYS1P36421 394 aaKnown RBP2.2□□□□□ -2.06
MCD1YDL003W YBP1P38315 674 aa2.2□□□□□ -2.06
MCD1YDL003W PCM1P38628 557 aaKnown RBP2.2□□□□□ -2.06
MCD1YDL003W OTU2P38747 307 aaKnown RBP2.2□□□□□ -2.06
MCD1YDL003W CRG1P38892 291 aaRIP-Chip data2.2□□□□□ -2.06not detected
MCD1YDL003W STN1P38960 494 aa2.2□□□□□ -2.06
MCD1YDL003W RRP8P38961 392 aaKnown RBP2.2□□□□□ -2.06
MCD1YDL003W AIM2P39721 246 aa2.2□□□□□ -2.06
MCD1YDL003W UBP7P40453 1071 aa2.2□□□□□ -2.06
MCD1YDL003W MSS2P40990 351 aa2.2□□□□□ -2.06
MCD1YDL003W COS4P43542 379 aa2.2□□□□□ -2.06
MCD1YDL003W LSM8P47093 109 aaKnown RBP2.2□□□□□ -2.06
MCD1YDL003W COS5P47187 383 aa2.2□□□□□ -2.06
MCD1YDL003W ASE1P50275 885 aa2.2□□□□□ -2.06
MCD1YDL003W SAP4P53036 818 aa2.2□□□□□ -2.06
MCD1YDL003W DBP6P53734 629 aaKnown RBP2.2□□□□□ -2.06
MCD1YDL003W COS1P53822 381 aa2.2□□□□□ -2.06
MCD1YDL003W KTR5P53966 522 aaPredicted RBP2.2□□□□□ -2.06
MCD1YDL003W PEX10Q05568 337 aa2.2□□□□□ -2.06
MCD1YDL003W VTA1Q06263 330 aa2.2□□□□□ -2.06
MCD1YDL003W YPS7Q06325 596 aa2.2□□□□□ -2.06
MCD1YDL003W YPD1Q07688 167 aa2.2□□□□□ -2.06
MCD1YDL003W PGC1Q08959 321 aa2.2□□□□□ -2.06
MCD1YDL003W YOR289WQ12012 251 aaPredicted RBP2.2□□□□□ -2.06
MCD1YDL003W THP3Q12049 470 aaKnown RBP2.2□□□□□ -2.06
MCD1YDL003W UBX3Q12229 455 aa2.2□□□□□ -2.06
MCD1YDL003W RRI2Q12348 645 aa2.2□□□□□ -2.06
MCD1YDL003W RRP36Q12481 300 aaPredicted RBP2.2□□□□□ -2.06
MCD1YDL003W NTE1Q04958 1679 aa2.19□□□□□ -2.06
MCD1YDL003W TY2B-LR1P0C2J3 1770 aa2.19□□□□□ -2.06
MCD1YDL003W TY2B-FP0CX63 1770 aa2.19□□□□□ -2.06
MCD1YDL003W TY2B-GR2P0CX64 1770 aa2.19□□□□□ -2.06
MCD1YDL003W TY2B-CP25384 1770 aa2.19□□□□□ -2.06
MCD1YDL003W TY2B-DR2Q03494 1770 aa2.19□□□□□ -2.06
MCD1YDL003W TY1B-DR1Q03855 1755 aa2.19□□□□□ -2.06
MCD1YDL003W TY2B-DR3Q07791 1770 aaKnown RBP2.19□□□□□ -2.06
MCD1YDL003W TY2B-OR1Q12113 1770 aa2.19□□□□□ -2.06
MCD1YDL003W TY2B-DR1Q12472 1770 aa2.19□□□□□ -2.06
MCD1YDL003W TY2B-BQ12491 1770 aa2.19□□□□□ -2.06
MCD1YDL003W TY2B-OR2Q12501 1770 aa2.19□□□□□ -2.06
MCD1YDL003W MRP2P10663 115 aaPredicted RBP2.19□□□□□ -2.06
MCD1YDL003W MRP13P12686 339 aa2.19□□□□□ -2.06
MCD1YDL003W NCP1P16603 691 aaKnown RBP2.19□□□□□ -2.06
MCD1YDL003W SAR1P20606 190 aaKnown RBP2.19□□□□□ -2.06
MCD1YDL003W ISY1P21374 235 aaPredicted RBP2.19□□□□□ -2.06
MCD1YDL003W CMK2P22517 447 aa2.19□□□□□ -2.06
MCD1YDL003W PCL2P25693 308 aa2.19□□□□□ -2.06
MCD1YDL003W COQ3P27680 312 aa2.19□□□□□ -2.06
MCD1YDL003W PMT2P31382 759 aa2.19□□□□□ -2.06
MCD1YDL003W TEF4P36008 412 aaKnown RBP2.19□□□□□ -2.06
MCD1YDL003W SDH8P38345 138 aa2.19□□□□□ -2.06
MCD1YDL003W DED81P38707 554 aaKnown RBP2.19□□□□□ -2.06
MCD1YDL003W GRE3P38715 327 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
MCD1YDL003W OCA5P38738 679 aa2.19□□□□□ -2.06
MCD1YDL003W UTP9P38882 575 aaKnown RBP2.19□□□□□ -2.06
MCD1YDL003W SEN34P39707 275 aa2.19□□□□□ -2.06
MCD1YDL003W YER034WP40022 185 aaKnown RBP2.19□□□□□ -2.06
MCD1YDL003W MAM33P40513 266 aa2.19□□□□□ -2.06
MCD1YDL003W ELP2P42935 788 aa2.19□□□□□ -2.06
MCD1YDL003W MDE1P47095 244 aa2.19□□□□□ -2.06
MCD1YDL003W RAD17P48581 401 aa2.19□□□□□ -2.06
MCD1YDL003W GPI8P49018 411 aa2.19□□□□□ -2.06
MCD1YDL003W LYS4P49367 693 aaPredicted RBP2.19□□□□□ -2.06
MCD1YDL003W MNT2P53059 558 aa2.19□□□□□ -2.06
MCD1YDL003W RPL22BP56628 122 aaKnown RBP2.19□□□□□ -2.06
MCD1YDL003W RMI1Q02685 241 aa2.19□□□□□ -2.06
MCD1YDL003W RPN4Q03465 531 aa2.19□□□□□ -2.06
MCD1YDL003W RAD30Q04049 632 aa2.19□□□□□ -2.06
MCD1YDL003W RPN9Q04062 393 aaKnown RBP2.19□□□□□ -2.06
MCD1YDL003W BNA7Q04066 261 aa2.19□□□□□ -2.06
MCD1YDL003W SPC2Q04969 178 aa2.19□□□□□ -2.06
MCD1YDL003W COS7Q07788 383 aa2.19□□□□□ -2.06
MCD1YDL003W ZEO1Q08245 113 aa2.19□□□□□ -2.06
MCD1YDL003W SGT1Q08446 395 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms