RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 IL25Q9H293 177 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 ZSWIM5Q9P217 1185 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 ADD3Q9UEY8 706 aaKnown RBP7.51□□□□□ -1.21
RTTN-215ENST00000639487 ADM5C9JUS6 153 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 MEIS2O14770 477 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 PDIA3P30101 505 aaKnown RBP7.51□□□□□ -1.21
RTTN-215ENST00000639487 ICA1Q05084 483 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 OLFM4Q6UX06 510 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 KRT25Q7Z3Z0 450 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 TRIM47Q96LD4 638 aa7.51□□□□□ -1.21
RTTN-215ENST00000639487 MICAL2O94851 1124 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 CDC25AP30304 524 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 PTH1RQ03431 593 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 DUSP28Q4G0W2 176 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 ODR4Q5SWX8 454 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 IGSF22Q8N9C0 903 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 SHISA4Q96DD7 197 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 CEP95Q96GE4 821 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 NTPCRQ9BSD7 190 aaKnown RBP7.5□□□□□ -1.21
RTTN-215ENST00000639487 ANKEF1Q9NU02 776 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 ZBTB47Q9UFB7 747 aaPredicted RBP7.5□□□□□ -1.21
RTTN-215ENST00000639487 TMEM189-UBE2V1I3L0A0 370 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 SEPT4O43236 478 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 EIF3JO75822 258 aaKnown RBP7.5□□□□□ -1.21
RTTN-215ENST00000639487 RAD17O75943 681 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 F2P00734 622 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 EEF2P13639 858 aaKnown RBP7.5□□□□□ -1.21
RTTN-215ENST00000639487 AXLP30530 894 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 DYNLL1P63167 89 aaKnown RBP7.5□□□□□ -1.21
RTTN-215ENST00000639487 KIF23Q02241 960 aaPredicted RBP7.5□□□□□ -1.21
RTTN-215ENST00000639487 KIAA1755Q5JYT7 1200 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 RNF168Q8IYW5 571 aaPredicted RBP7.5□□□□□ -1.21
RTTN-215ENST00000639487 FAM43AQ8N2R8 423 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 MAML3Q96JK9 1138 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 TMEM39BQ9GZU3 492 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 ABHD16BQ9H3Z7 469 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 PCDHA4Q9UN74 947 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 DERAQ9Y315 318 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 FANCMQ8IYD8 2048 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 ASTN1O14525 1302 aa7.5□□□□□ -1.21
RTTN-215ENST00000639487 A0A1W2PQ27 194 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 A0A1W2PQ64 194 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 A0A1W2PQD8 194 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 CELF2O95319 508 aaKnown RBP7.49□□□□□ -1.21
RTTN-215ENST00000639487 CLDN10P78369 228 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 SMIM5Q71RC9 77 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 ZNF654Q8IZM8 581 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 CAGE1Q8TC20 777 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 FRAT1Q92837 279 aaPredicted RBP7.49□□□□□ -1.21
RTTN-215ENST00000639487 KATNAL1Q9BW62 490 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 AMNQ9BXJ7 453 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 CCSER1Q9C0I3 900 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 SIL1Q9H173 461 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 ARMT1Q9H993 441 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 TBC1D22BQ9NU19 505 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 KIF3AQ9Y496 699 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 PDHXO00330 501 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 ZBED4O75132 1171 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 SLC4A3P48751 1232 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 JAK3P52333 1124 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 FAM189BP81408 668 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 TMEM132BQ14DG7 1078 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 FANCBQ8NB91 859 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 TNPO1Q92973 898 aaKnown RBP7.49□□□□□ -1.21
RTTN-215ENST00000639487 FAM167AQ96KS9 214 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 GLIS2Q9BZE0 524 aaPredicted RBP7.49□□□□□ -1.21
RTTN-215ENST00000639487 COL5A1P20908 1838 aaPredicted RBP7.49□□□□□ -1.21
RTTN-215ENST00000639487 USP17L12C9JPN9 530 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 USP17L21D6R901 530 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 F5H6K3 240 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 DHX15O43143 795 aaKnown RBP7.49□□□□□ -1.21
RTTN-215ENST00000639487 ZEB2O60315 1214 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 CTDNEP1O95476 244 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 ALDH5A1P51649 535 aaPredicted RBP7.49□□□□□ -1.21
RTTN-215ENST00000639487 KLRC3Q07444 240 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 SAMD7Q7Z3H4 446 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 SLFN12Q8IYM2 578 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 OTUD7AQ8TE49 926 aaPredicted RBP7.49□□□□□ -1.21
RTTN-215ENST00000639487 SLC10A4Q96EP9 437 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 FAM227BQ96M60 508 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 PXMP2Q9NR77 195 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 LIMCH1Q9UPQ0 1083 aa7.49□□□□□ -1.21
RTTN-215ENST00000639487 CITO14578 2027 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 FIBPO43427 364 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 YEATS4O95619 227 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 ZKSCAN1P17029 563 aaPredicted RBP7.48□□□□□ -1.21
RTTN-215ENST00000639487 RFC5P40937 340 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 PTK7Q13308 1070 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 PDE12Q6L8Q7 609 aaKnown RBP7.48□□□□□ -1.21
RTTN-215ENST00000639487 TMEM184AQ6ZMB5 413 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 GPR142Q7Z601 462 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 NT5DC4Q86YG4 428 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 NSUN7Q8NE18 718 aaKnown RBP7.48□□□□□ -1.21
RTTN-215ENST00000639487 TGFBRAP1Q8WUH2 860 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 IPO9Q96P70 1041 aaKnown RBP7.48□□□□□ -1.21
RTTN-215ENST00000639487 AATFQ9NY61 560 aaKnown RBP eCLIP7.48□□□□□ -1.21
RTTN-215ENST00000639487 RAI14Q9P0K7 980 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 VAV3Q9UKW4 847 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 LZTS1Q9Y250 596 aa7.48□□□□□ -1.21
RTTN-215ENST00000639487 MMP1P03956 469 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms