RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 PDIA6Q15084 440 aa18.27■□□□□ 0.52
SCARB2-210ENST00000638567 DGKHQ86XP1 1220 aa18.27■□□□□ 0.52
SCARB2-210ENST00000638567 SLFN12Q8IYM2 578 aa18.27■□□□□ 0.52
SCARB2-210ENST00000638567 CACNA2D3Q8IZS8 1091 aa18.27■□□□□ 0.52
SCARB2-210ENST00000638567 PCDHA13Q9Y5I0 950 aa18.27■□□□□ 0.52
SCARB2-210ENST00000638567 CEMIPQ8WUJ3 1361 aa18.27■□□□□ 0.52
SCARB2-210ENST00000638567 SPATA31A3Q5VYP0 1347 aa18.27■□□□□ 0.52
SCARB2-210ENST00000638567 KCNB2Q92953 911 aa18.27■□□□□ 0.52
SCARB2-210ENST00000638567 BAIAP2L1Q9UHR4 511 aa18.27■□□□□ 0.52
SCARB2-210ENST00000638567 FBXO2Q9UK22 296 aaPredicted RBP18.27■□□□□ 0.52
SCARB2-210ENST00000638567 AK9Q5TCS8 1911 aa18.27■□□□□ 0.52
SCARB2-210ENST00000638567 CTIFO43310 598 aaKnown RBP18.27■□□□□ 0.51
SCARB2-210ENST00000638567 TRIM28Q13263 835 aaKnown RBP18.27■□□□□ 0.51
SCARB2-210ENST00000638567 SLFN13Q68D06 897 aa18.27■□□□□ 0.51
SCARB2-210ENST00000638567 KIAA0825Q8IV33 1275 aa18.27■□□□□ 0.51
SCARB2-210ENST00000638567 ZNF710Q8N1W2 664 aa18.27■□□□□ 0.51
SCARB2-210ENST00000638567 FAM133AQ8N9E0 248 aa18.27■□□□□ 0.51
SCARB2-210ENST00000638567 CCDC63Q8NA47 563 aa18.27■□□□□ 0.51
SCARB2-210ENST00000638567 RSRC1Q96IZ7 334 aaKnown RBP18.27■□□□□ 0.51
SCARB2-210ENST00000638567 KIFC2Q96AC6 838 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 EXOC7Q9UPT5 735 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 MRFAP1Q9Y605 127 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 TTC26A0AVF1 554 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 FAM205CA6NFA0 338 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 VPS41P49754 854 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 APBA1Q02410 837 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 USP49Q70CQ1 688 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 FBXO11Q86XK2 927 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 CDHR2Q9BYE9 1310 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 PFKFB3Q16875 520 aaPredicted RBP18.26■□□□□ 0.51
SCARB2-210ENST00000638567 DOK7Q18PE1 504 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 NSMFQ6X4W1 530 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 ANKRD42Q8N9B4 389 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 SERPINA10Q9UK55 444 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 ASPRV1Q53RT3 343 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 VSIG1Q86XK7 387 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 PLCB1Q9NQ66 1216 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 ADAMTS1Q9UHI8 967 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 TUBE1Q9UJT0 475 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 PIK3C2BO00750 1634 aa18.26■□□□□ 0.51
SCARB2-210ENST00000638567 LIN9Q5TKA1 542 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 KCTD1Q719H9 257 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 FERMT1Q9BQL6 677 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 LEMD3Q9Y2U8 911 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 XDHP47989 1333 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 PP2D1A8MPX8 630 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 ICA1Q05084 483 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 CERKLQ49MI3 558 aaPredicted RBP18.25■□□□□ 0.51
SCARB2-210ENST00000638567 IGDCC4Q8TDY8 1250 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 TRIM7Q9C029 511 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 SENP2Q9HC62 589 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 GAS8O95995 478 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 ATP2A2P16615 1042 aaKnown RBP18.25■□□□□ 0.51
SCARB2-210ENST00000638567 KCNJ6P48051 423 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 GKAP1Q5VSY0 366 aaPredicted RBP18.25■□□□□ 0.51
SCARB2-210ENST00000638567 MTA3Q9BTC8 594 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 BSDC1Q9NW68 430 aaPredicted RBP18.25■□□□□ 0.51
SCARB2-210ENST00000638567 FAM184BQ9ULE4 1060 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 UTYO14607 1347 aa18.25■□□□□ 0.51
SCARB2-210ENST00000638567 GPATCH4Q5T3I0 446 aaKnown RBP18.24■□□□□ 0.51
SCARB2-210ENST00000638567 AGTPBP1Q9UPW5 1226 aa18.24■□□□□ 0.51
SCARB2-210ENST00000638567 RCAN1P53805 252 aa18.24■□□□□ 0.51
SCARB2-210ENST00000638567 CLUL1Q15846 466 aa18.24■□□□□ 0.51
SCARB2-210ENST00000638567 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.24■□□□□ 0.51
SCARB2-210ENST00000638567 MROH7-TTC4A0A0A0MT08 1334 aa18.24■□□□□ 0.51
SCARB2-210ENST00000638567 CPDO75976 1380 aa18.24■□□□□ 0.51
SCARB2-210ENST00000638567 PPP2R5EQ16537 467 aa18.24■□□□□ 0.51
SCARB2-210ENST00000638567 HDAC6Q9UBN7 1215 aa18.24■□□□□ 0.51
SCARB2-210ENST00000638567 SMC6Q96SB8 1091 aa18.24■□□□□ 0.51
SCARB2-210ENST00000638567 RABGAP1Q9Y3P9 1069 aa18.24■□□□□ 0.51
SCARB2-210ENST00000638567 BZW2Q9Y6E2 419 aaKnown RBP18.24■□□□□ 0.51
SCARB2-210ENST00000638567 UBE2SQ16763 222 aa18.23■□□□□ 0.51
SCARB2-210ENST00000638567 DCP1AQ9NPI6 582 aaPredicted RBP18.23■□□□□ 0.51
SCARB2-210ENST00000638567 A0A1B0GUA9 196 aa18.23■□□□□ 0.51
SCARB2-210ENST00000638567 MEIS1O00470 390 aa18.23■□□□□ 0.51
SCARB2-210ENST00000638567 PPM1KQ8N3J5 372 aa18.23■□□□□ 0.51
SCARB2-210ENST00000638567 CCDC127Q96BQ5 260 aa18.23■□□□□ 0.51
SCARB2-210ENST00000638567 LARSQ9P2J5 1176 aaKnown RBP18.23■□□□□ 0.51
SCARB2-210ENST00000638567 PARP2Q9UGN5 583 aa18.23■□□□□ 0.51
SCARB2-210ENST00000638567 DIP2CQ9Y2E4 1556 aa18.23■□□□□ 0.51
SCARB2-210ENST00000638567 KRT15P19012 456 aa18.23■□□□□ 0.51
SCARB2-210ENST00000638567 IFT88Q13099 833 aa18.23■□□□□ 0.51
SCARB2-210ENST00000638567 NYAP1Q6ZVC0 841 aa18.23■□□□□ 0.51
SCARB2-210ENST00000638567 GSPT2Q8IYD1 628 aaKnown RBP18.23■□□□□ 0.51
SCARB2-210ENST00000638567 SLC44A5Q8NCS7 719 aa18.23■□□□□ 0.51
SCARB2-210ENST00000638567 EMILIN3Q9NT22 766 aa18.23■□□□□ 0.51
SCARB2-210ENST00000638567 CLIC2O15247 247 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 BUB1BO60566 1050 aaPredicted RBP18.22■□□□□ 0.51
SCARB2-210ENST00000638567 NNTQ13423 1086 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 ODR4Q5SWX8 454 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 SERPINB13Q9UIV8 391 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 THRAP3Q9Y2W1 955 aaKnown RBP18.22■□□□□ 0.51
SCARB2-210ENST00000638567 TTLL1O95922 423 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 DCUN1D2Q6PH85 259 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 MIER3Q7Z3K6 550 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 AMNQ9BXJ7 453 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 CD163L1Q9NR16 1453 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 KIDINS220Q9ULH0 1771 aa18.22■□□□□ 0.51
SCARB2-210ENST00000638567 AFPP02771 609 aaKnown RBP18.22■□□□□ 0.51
SCARB2-210ENST00000638567 BRINP3Q76B58 766 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms