RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 TTLL4Q14679 1199 aa22.23■■□□□ 1.15
SMN2-215ENST00000628696 GPATCH4Q5T3I0 446 aaKnown RBP22.23■■□□□ 1.15
SMN2-215ENST00000628696 PPP2R2DQ66LE6 453 aa22.23■■□□□ 1.15
SMN2-215ENST00000628696 VWCEQ96DN2 955 aa22.23■■□□□ 1.15
SMN2-215ENST00000628696 KPNA6O60684 536 aa22.22■■□□□ 1.15
SMN2-215ENST00000628696 ATP2A2P16615 1042 aaKnown RBP22.22■■□□□ 1.15
SMN2-215ENST00000628696 EDNRBP24530 442 aa22.22■■□□□ 1.15
SMN2-215ENST00000628696 DGKHQ86XP1 1220 aa22.22■■□□□ 1.15
SMN2-215ENST00000628696 THEGQ9P2T0 379 aa22.22■■□□□ 1.15
SMN2-215ENST00000628696 PCDHA11Q9Y5I1 949 aa22.22■■□□□ 1.15
SMN2-215ENST00000628696 MYH6P13533 1939 aa22.21■■□□□ 1.15
SMN2-215ENST00000628696 TRIP12Q14669 1992 aaPredicted RBP22.21■■□□□ 1.15
SMN2-215ENST00000628696 KDM4AO75164 1064 aa22.21■■□□□ 1.15
SMN2-215ENST00000628696 PFKMP08237 780 aa22.21■■□□□ 1.15
SMN2-215ENST00000628696 IQCA1Q86XH1 822 aa22.21■■□□□ 1.15
SMN2-215ENST00000628696 RETREG2Q8NC44 543 aa22.21■■□□□ 1.15
SMN2-215ENST00000628696 PNMA1Q8ND90 353 aa22.21■■□□□ 1.15
SMN2-215ENST00000628696 ATXN2LQ8WWM7 1075 aaKnown RBP22.21■■□□□ 1.15
SMN2-215ENST00000628696 TBC1D5Q92609 795 aa22.21■■□□□ 1.15
SMN2-215ENST00000628696 SPTBN5Q9NRC6 3674 aaKnown RBP22.2■■□□□ 1.14
SMN2-215ENST00000628696 A6NJR5 290 aa22.2■■□□□ 1.14
SMN2-215ENST00000628696 ARIH2O95376 493 aa22.2■■□□□ 1.14
SMN2-215ENST00000628696 ACTN1P12814 892 aa22.2■■□□□ 1.14
SMN2-215ENST00000628696 CDC37Q16543 378 aaPredicted RBP22.2■■□□□ 1.14
SMN2-215ENST00000628696 NFRKBQ6P4R8 1299 aa22.2■■□□□ 1.14
SMN2-215ENST00000628696 CWC27Q6UX04 472 aaKnown RBP22.2■■□□□ 1.14
SMN2-215ENST00000628696 MICALL1Q8N3F8 863 aa22.2■■□□□ 1.14
SMN2-215ENST00000628696 RGS22Q8NE09 1264 aa22.2■■□□□ 1.14
SMN2-215ENST00000628696 FTOQ9C0B1 505 aaKnown RBP eCLIP22.2■■□□□ 1.14
SMN2-215ENST00000628696 RWDD1Q9H446 243 aaPredicted RBP22.2■■□□□ 1.14
SMN2-215ENST00000628696 KAT14Q9H8E8 782 aa22.2■■□□□ 1.14
SMN2-215ENST00000628696 DIAPH3Q9NSV4 1193 aa22.2■■□□□ 1.14
SMN2-215ENST00000628696 NOD1Q9Y239 953 aa22.2■■□□□ 1.14
SMN2-215ENST00000628696 CHD9Q3L8U1 2897 aa22.19■■□□□ 1.14
SMN2-215ENST00000628696 TNFRSF10AO00220 468 aa22.19■■□□□ 1.14
SMN2-215ENST00000628696 DHX16O60231 1041 aaKnown RBP22.19■■□□□ 1.14
SMN2-215ENST00000628696 CCDC178Q5BJE1 867 aa22.19■■□□□ 1.14
SMN2-215ENST00000628696 SEPT14Q6ZU15 432 aa22.19■■□□□ 1.14
SMN2-215ENST00000628696 ADGRF4Q8IZF3 695 aa22.19■■□□□ 1.14
SMN2-215ENST00000628696 TAAR1Q96RJ0 339 aa22.19■■□□□ 1.14
SMN2-215ENST00000628696 VAT1LQ9HCJ6 419 aa22.19■■□□□ 1.14
SMN2-215ENST00000628696 ABCB11O95342 1321 aa22.18■■□□□ 1.14
SMN2-215ENST00000628696 B4E1Z4 1266 aa22.18■■□□□ 1.14
SMN2-215ENST00000628696 RFC2P35250 354 aa22.18■■□□□ 1.14
SMN2-215ENST00000628696 MRPS5P82675 430 aaKnown RBP22.18■■□□□ 1.14
SMN2-215ENST00000628696 TMEM67Q5HYA8 995 aa22.18■■□□□ 1.14
SMN2-215ENST00000628696 CHST3Q7LGC8 479 aa22.18■■□□□ 1.14
SMN2-215ENST00000628696 CHD1LQ86WJ1 897 aa22.18■■□□□ 1.14
SMN2-215ENST00000628696 PLEKHM2Q8IWE5 1019 aa22.18■■□□□ 1.14
SMN2-215ENST00000628696 SMC5Q8IY18 1101 aa22.18■■□□□ 1.14
SMN2-215ENST00000628696 AFG1LQ8WV93 481 aa22.18■■□□□ 1.14
SMN2-215ENST00000628696 ASB2Q96Q27 587 aa22.18■■□□□ 1.14
SMN2-215ENST00000628696 LAMA4Q16363 1823 aa22.17■■□□□ 1.14
SMN2-215ENST00000628696 IQCF3P0C7M6 154 aa22.17■■□□□ 1.14
SMN2-215ENST00000628696 PTPN11Q06124 597 aaPredicted RBP22.17■■□□□ 1.14
SMN2-215ENST00000628696 BFSP2Q13515 415 aa22.17■■□□□ 1.14
SMN2-215ENST00000628696 LY6KQ17RY6 165 aa22.17■■□□□ 1.14
SMN2-215ENST00000628696 TET1Q8NFU7 2136 aa22.17■■□□□ 1.14
SMN2-215ENST00000628696 SYTL5Q8TDW5 730 aaPredicted RBP22.17■■□□□ 1.14
SMN2-215ENST00000628696 NSUN6Q8TEA1 469 aaKnown RBP22.17■■□□□ 1.14
SMN2-215ENST00000628696 ZSCAN10Q96SZ4 725 aaPredicted RBP22.17■■□□□ 1.14
SMN2-215ENST00000628696 CERS4Q9HA82 394 aa22.17■■□□□ 1.14
SMN2-215ENST00000628696 KIAA1217Q5T5P2 1943 aa22.17■■□□□ 1.14
SMN2-215ENST00000628696 PTGISQ16647 500 aa22.16■■□□□ 1.14
SMN2-215ENST00000628696 CCDC62Q6P9F0 684 aa22.16■■□□□ 1.14
SMN2-215ENST00000628696 MCF2L2Q86YR7 1114 aa22.16■■□□□ 1.14
SMN2-215ENST00000628696 IL27Q8NEV9 243 aa22.16■■□□□ 1.14
SMN2-215ENST00000628696 RMDN3Q96TC7 470 aa22.16■■□□□ 1.14
SMN2-215ENST00000628696 TSPYL2Q9H2G4 693 aaPredicted RBP22.16■■□□□ 1.14
SMN2-215ENST00000628696 COL20A1Q9P218 1284 aa22.16■■□□□ 1.14
SMN2-215ENST00000628696 MYH7BA7E2Y1 1941 aa22.16■■□□□ 1.14
SMN2-215ENST00000628696 RFXAPO00287 272 aa22.15■■□□□ 1.14
SMN2-215ENST00000628696 PITPNM1O00562 1244 aa22.15■■□□□ 1.14
SMN2-215ENST00000628696 GH1P01241 217 aa22.15■■□□□ 1.14
SMN2-215ENST00000628696 CA3P07451 260 aa22.15■■□□□ 1.14
SMN2-215ENST00000628696 PARP1P09874 1014 aaKnown RBP22.15■■□□□ 1.14
SMN2-215ENST00000628696 STXBP2Q15833 593 aa22.15■■□□□ 1.14
SMN2-215ENST00000628696 QRICH1Q2TAL8 776 aa22.15■■□□□ 1.14
SMN2-215ENST00000628696 ASPRV1Q53RT3 343 aa22.15■■□□□ 1.14
SMN2-215ENST00000628696 FBXO11Q86XK2 927 aa22.15■■□□□ 1.14
SMN2-215ENST00000628696 ENAHQ8N8S7 591 aaPredicted RBP22.15■■□□□ 1.14
SMN2-215ENST00000628696 ANKS1AQ92625 1134 aa22.15■■□□□ 1.14
SMN2-215ENST00000628696 ZSWIM5Q9P217 1185 aa22.15■■□□□ 1.14
SMN2-215ENST00000628696 MRPL11Q9Y3B7 192 aaKnown RBP22.15■■□□□ 1.14
SMN2-215ENST00000628696 TANC1Q9C0D5 1861 aa22.15■■□□□ 1.14
SMN2-215ENST00000628696 TCF20Q9UGU0 1960 aaKnown RBP22.14■■□□□ 1.14
SMN2-215ENST00000628696 IGHDP01880 384 aa22.14■■□□□ 1.13
SMN2-215ENST00000628696 MMP3P08254 477 aa22.14■■□□□ 1.13
SMN2-215ENST00000628696 NT5C2P49902 561 aa22.14■■□□□ 1.13
SMN2-215ENST00000628696 ARHGAP1Q07960 439 aa22.14■■□□□ 1.13
SMN2-215ENST00000628696 AAMPQ13685 434 aa22.14■■□□□ 1.13
SMN2-215ENST00000628696 IMMTQ16891 758 aaKnown RBP22.14■■□□□ 1.13
SMN2-215ENST00000628696 ARHGEF16Q5VV41 709 aa22.14■■□□□ 1.13
SMN2-215ENST00000628696 ADAMTS19Q8TE59 1207 aa22.14■■□□□ 1.13
SMN2-215ENST00000628696 SLC9A7Q96T83 725 aa22.14■■□□□ 1.13
SMN2-215ENST00000628696 OSBPL3Q9H4L5 887 aa22.14■■□□□ 1.13
SMN2-215ENST00000628696 PRRC2BQ5JSZ5 2229 aaKnown RBP22.13■■□□□ 1.13
SMN2-215ENST00000628696 HIP1O00291 1037 aa22.13■■□□□ 1.13
SMN2-215ENST00000628696 EIF2AK2P19525 551 aaKnown RBP22.13■■□□□ 1.13
SMN2-215ENST00000628696 CASTP20810 708 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms