RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 WNT8AQ9H1J5 351 aa20.79■□□□□ 0.92
SSBP1-215ENST00000612337 GPHNQ9NQX3 736 aaPredicted RBP20.79■□□□□ 0.92
SSBP1-215ENST00000612337 ZSWIM5Q9P217 1185 aa20.79■□□□□ 0.92
SSBP1-215ENST00000612337 SCN10AQ9Y5Y9 1956 aa20.79■□□□□ 0.92
SSBP1-215ENST00000612337 ABCB11O95342 1321 aa20.78■□□□□ 0.92
SSBP1-215ENST00000612337 SUPT20HL2P0C7V6 817 aa20.78■□□□□ 0.92
SSBP1-215ENST00000612337 RPUSD2Q8IZ73 545 aaKnown RBP20.78■□□□□ 0.92
SSBP1-215ENST00000612337 ADGRF4Q8IZF3 695 aa20.78■□□□□ 0.92
SSBP1-215ENST00000612337 CNNM2Q9H8M5 875 aa20.78■□□□□ 0.92
SSBP1-215ENST00000612337 TRMT13Q9NUP7 481 aaKnown RBP20.78■□□□□ 0.92
SSBP1-215ENST00000612337 CXXC1Q9P0U4 656 aaPredicted RBP20.78■□□□□ 0.92
SSBP1-215ENST00000612337 TNKSO95271 1327 aa20.78■□□□□ 0.92
SSBP1-215ENST00000612337 MYO9BQ13459 2157 aa20.78■□□□□ 0.92
SSBP1-215ENST00000612337 A6NJR5 290 aa20.77■□□□□ 0.92
SSBP1-215ENST00000612337 KPNA6O60684 536 aa20.77■□□□□ 0.92
SSBP1-215ENST00000612337 PARP1P09874 1014 aaKnown RBP20.77■□□□□ 0.92
SSBP1-215ENST00000612337 TTLL4Q14679 1199 aa20.77■□□□□ 0.92
SSBP1-215ENST00000612337 TXNP10599 105 aaKnown RBP20.76■□□□□ 0.91
SSBP1-215ENST00000612337 RAB30Q15771 203 aa20.76■□□□□ 0.91
SSBP1-215ENST00000612337 OTOP2Q7RTS6 562 aa20.76■□□□□ 0.91
SSBP1-215ENST00000612337 MCF2L2Q86YR7 1114 aa20.76■□□□□ 0.91
SSBP1-215ENST00000612337 SYTL5Q8TDW5 730 aaPredicted RBP20.76■□□□□ 0.91
SSBP1-215ENST00000612337 TBC1D5Q92609 795 aa20.76■□□□□ 0.91
SSBP1-215ENST00000612337 COPS5Q92905 334 aa20.76■□□□□ 0.91
SSBP1-215ENST00000612337 UBAC1Q9BSL1 405 aa20.76■□□□□ 0.91
SSBP1-215ENST00000612337 MYH6P13533 1939 aa20.76■□□□□ 0.91
SSBP1-215ENST00000612337 ARIH2O95376 493 aa20.75■□□□□ 0.91
SSBP1-215ENST00000612337 CYP2C9P11712 490 aa20.75■□□□□ 0.91
SSBP1-215ENST00000612337 QRICH1Q2TAL8 776 aa20.75■□□□□ 0.91
SSBP1-215ENST00000612337 NBPF20Q3BBV1 942 aa20.75■□□□□ 0.91
SSBP1-215ENST00000612337 NFRKBQ6P4R8 1299 aa20.75■□□□□ 0.91
SSBP1-215ENST00000612337 NSUN6Q8TEA1 469 aaKnown RBP20.75■□□□□ 0.91
SSBP1-215ENST00000612337 SCLYQ96I15 445 aa20.75■□□□□ 0.91
SSBP1-215ENST00000612337 TAAR1Q96RJ0 339 aa20.75■□□□□ 0.91
SSBP1-215ENST00000612337 IL25Q9H293 177 aa20.75■□□□□ 0.91
SSBP1-215ENST00000612337 JMJD4Q9H9V9 463 aa20.75■□□□□ 0.91
SSBP1-215ENST00000612337 MSRAQ9UJ68 235 aa20.75■□□□□ 0.91
SSBP1-215ENST00000612337 MRPL11Q9Y3B7 192 aaKnown RBP20.75■□□□□ 0.91
SSBP1-215ENST00000612337 DHX16O60231 1041 aaKnown RBP20.74■□□□□ 0.91
SSBP1-215ENST00000612337 FAM47CQ5HY64 1035 aa20.74■□□□□ 0.91
SSBP1-215ENST00000612337 IFIT1BQ5T764 474 aaKnown RBP20.74■□□□□ 0.91
SSBP1-215ENST00000612337 CCDC62Q6P9F0 684 aa20.74■□□□□ 0.91
SSBP1-215ENST00000612337 FBXO11Q86XK2 927 aa20.74■□□□□ 0.91
SSBP1-215ENST00000612337 VWCEQ96DN2 955 aa20.74■□□□□ 0.91
SSBP1-215ENST00000612337 IWS1Q96ST2 819 aa20.74■□□□□ 0.91
SSBP1-215ENST00000612337 COL20A1Q9P218 1284 aa20.74■□□□□ 0.91
SSBP1-215ENST00000612337 TTC28Q96AY4 2481 aa20.73■□□□□ 0.91
SSBP1-215ENST00000612337 MUC3AQ02505 3323 aa20.73■□□□□ 0.91
SSBP1-215ENST00000612337 PFKMP08237 780 aa20.73■□□□□ 0.91
SSBP1-215ENST00000612337 PTPN11Q06124 597 aaPredicted RBP20.73■□□□□ 0.91
SSBP1-215ENST00000612337 RMDN3Q96TC7 470 aa20.73■□□□□ 0.91
SSBP1-215ENST00000612337 GAS2L1Q99501 681 aaPredicted RBP20.73■□□□□ 0.91
SSBP1-215ENST00000612337 VAT1LQ9HCJ6 419 aa20.73■□□□□ 0.91
SSBP1-215ENST00000612337 GBF1Q92538 1859 aa20.73■□□□□ 0.91
SSBP1-215ENST00000612337 GSPT1P15170 499 aaKnown RBP20.72■□□□□ 0.91
SSBP1-215ENST00000612337 PDE4AP27815 886 aa20.72■□□□□ 0.91
SSBP1-215ENST00000612337 SEC23AQ15436 765 aa20.72■□□□□ 0.91
SSBP1-215ENST00000612337 STXBP2Q15833 593 aa20.72■□□□□ 0.91
SSBP1-215ENST00000612337 TTC22Q5TAA0 569 aa20.72■□□□□ 0.91
SSBP1-215ENST00000612337 SEPT14Q6ZU15 432 aa20.72■□□□□ 0.91
SSBP1-215ENST00000612337 STAG2Q8N3U4 1231 aa20.72■□□□□ 0.91
SSBP1-215ENST00000612337 SLC4A7Q9Y6M7 1214 aa20.72■□□□□ 0.91
SSBP1-215ENST00000612337 KIAA1217Q5T5P2 1943 aa20.72■□□□□ 0.91
SSBP1-215ENST00000612337 GH1P01241 217 aa20.71■□□□□ 0.91
SSBP1-215ENST00000612337 USP38Q8NB14 1042 aa20.71■□□□□ 0.91
SSBP1-215ENST00000612337 NKX2-4Q9H2Z4 354 aa20.71■□□□□ 0.91
SSBP1-215ENST00000612337 PRDM12Q9H4Q4 367 aa20.71■□□□□ 0.91
SSBP1-215ENST00000612337 YBX2Q9Y2T7 364 aaKnown RBP20.71■□□□□ 0.91
SSBP1-215ENST00000612337 PITPNM1O00562 1244 aa20.7■□□□□ 0.9
SSBP1-215ENST00000612337 RFC2P35250 354 aa20.7■□□□□ 0.9
SSBP1-215ENST00000612337 ARHGAP1Q07960 439 aa20.7■□□□□ 0.9
SSBP1-215ENST00000612337 LY6KQ17RY6 165 aa20.7■□□□□ 0.9
SSBP1-215ENST00000612337 ARHGEF16Q5VV41 709 aa20.7■□□□□ 0.9
SSBP1-215ENST00000612337 CYB5R4Q7L1T6 521 aa20.7■□□□□ 0.9
SSBP1-215ENST00000612337 PPP1R13LQ8WUF5 828 aa20.7■□□□□ 0.9
SSBP1-215ENST00000612337 AFG1LQ8WV93 481 aa20.7■□□□□ 0.9
SSBP1-215ENST00000612337 AMNQ9BXJ7 453 aa20.7■□□□□ 0.9
SSBP1-215ENST00000612337 SLC28A3Q9HAS3 691 aa20.7■□□□□ 0.9
SSBP1-215ENST00000612337 MAD2L2Q9UI95 211 aa20.7■□□□□ 0.9
SSBP1-215ENST00000612337 TRANK1O15050 2925 aa20.7■□□□□ 0.9
SSBP1-215ENST00000612337 SCN5AQ14524 2016 aa20.7■□□□□ 0.9
SSBP1-215ENST00000612337 ZBBXA8MT70 800 aa20.69■□□□□ 0.9
SSBP1-215ENST00000612337 KLRF2D3W0D1 207 aa20.69■□□□□ 0.9
SSBP1-215ENST00000612337 CFBP00751 764 aa20.69■□□□□ 0.9
SSBP1-215ENST00000612337 MMP3P08254 477 aa20.69■□□□□ 0.9
SSBP1-215ENST00000612337 GHRHRQ02643 423 aa20.69■□□□□ 0.9
SSBP1-215ENST00000612337 TRDNQ13061 729 aa20.69■□□□□ 0.9
SSBP1-215ENST00000612337 DEFB128Q7Z7B8 93 aa20.69■□□□□ 0.9
SSBP1-215ENST00000612337 MTMR8Q96EF0 704 aa20.69■□□□□ 0.9
SSBP1-215ENST00000612337 PXMP2Q9NR77 195 aa20.69■□□□□ 0.9
SSBP1-215ENST00000612337 PALM3A6NDB9 673 aaPredicted RBP20.68■□□□□ 0.9
SSBP1-215ENST00000612337 OPLAHO14841 1288 aa20.68■□□□□ 0.9
SSBP1-215ENST00000612337 ZBTB5O15062 677 aa20.68■□□□□ 0.9
SSBP1-215ENST00000612337 EIF3JO75822 258 aaKnown RBP20.68■□□□□ 0.9
SSBP1-215ENST00000612337 NR3C2P08235 984 aa20.68■□□□□ 0.9
SSBP1-215ENST00000612337 ATP2A2P16615 1042 aaKnown RBP20.68■□□□□ 0.9
SSBP1-215ENST00000612337 EIF2AK2P19525 551 aaKnown RBP20.68■□□□□ 0.9
SSBP1-215ENST00000612337 HSD17B4P51659 736 aa20.68■□□□□ 0.9
SSBP1-215ENST00000612337 RABGGTBP53611 331 aa20.68■□□□□ 0.9
SSBP1-215ENST00000612337 BFSP2Q13515 415 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms