RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 VCXQ9H320 206 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 SUN1O94901 812 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 PLEKHA8P1O95397 391 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 PLCG1P19174 1290 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 NFRKBQ6P4R8 1299 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 ATG9AQ7Z3C6 839 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 GPBP1Q86WP2 473 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 TMOD2Q9NZR1 351 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 CAPN11Q9UMQ6 739 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 PCDHB13Q9Y5F0 798 aa16.06■□□□□ 0.16
VPS36-207ENST00000611132 GYPCP04921 128 aa16.05■□□□□ 0.16
VPS36-207ENST00000611132 RCAN1P53805 252 aa16.05■□□□□ 0.16
VPS36-207ENST00000611132 KDM3AQ9Y4C1 1321 aa16.05■□□□□ 0.16
VPS36-207ENST00000611132 MEFVO15553 781 aaPredicted RBP16.05■□□□□ 0.16
VPS36-207ENST00000611132 SASH3O75995 380 aa16.05■□□□□ 0.16
VPS36-207ENST00000611132 SERPING1P05155 500 aa16.05■□□□□ 0.16
VPS36-207ENST00000611132 PLS1Q14651 629 aa16.05■□□□□ 0.16
VPS36-207ENST00000611132 FBXW10Q5XX13 1052 aa16.05■□□□□ 0.16
VPS36-207ENST00000611132 ARHGEF2Q92974 986 aaKnown RBP16.05■□□□□ 0.16
VPS36-207ENST00000611132 RAB3IPQ96QF0 476 aaPredicted RBP16.05■□□□□ 0.16
VPS36-207ENST00000611132 MAP2P11137 1827 aaKnown RBP16.05■□□□□ 0.16
VPS36-207ENST00000611132 RASSF2P50749 326 aa16.05■□□□□ 0.16
VPS36-207ENST00000611132 ANTXR2P58335 489 aa16.05■□□□□ 0.16
VPS36-207ENST00000611132 MTA3Q9BTC8 594 aa16.05■□□□□ 0.16
VPS36-207ENST00000611132 DAAM1Q9Y4D1 1078 aa16.05■□□□□ 0.16
VPS36-207ENST00000611132 A0A0G2JLW4 131 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 ALX1Q15699 326 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 LRRC31Q6UY01 552 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 ELOA2Q8IYF1 753 aaPredicted RBP16.04■□□□□ 0.16
VPS36-207ENST00000611132 GLT8D2Q9H1C3 349 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 GCNT3O95395 438 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 GUCY1A2P33402 732 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 NLRP14Q86W24 1093 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 LRRC1Q9BTT6 524 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 TFCP2L1Q9NZI6 479 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 HEG1Q9ULI3 1381 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 ZNF131P52739 623 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 USP49Q70CQ1 688 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 UIMC1Q96RL1 719 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 NYXQ9GZU5 481 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 SNX12Q9UMY4 172 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 HPSEQ9Y251 543 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 SETD1BQ9UPS6 1966 aaKnown RBP16.04■□□□□ 0.16
VPS36-207ENST00000611132 ESYT3A0FGR9 886 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 LUC7L3O95232 432 aaKnown RBP16.04■□□□□ 0.16
VPS36-207ENST00000611132 SLC20A2Q08357 652 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 EXOC3L4Q17RC7 722 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 ACSBG1Q96GR2 724 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 TRIM10Q9UDY6 481 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 PCDHA12Q9UN75 941 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 COL4A3BPQ9Y5P4 624 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 UTYO14607 1347 aa16.04■□□□□ 0.16
VPS36-207ENST00000611132 CD163L1Q9NR16 1453 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 PSMD14O00487 310 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 GAS8O95995 478 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 GOLGA8HP0CJ92 632 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 BIRC3Q13489 604 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 RASGRF1Q13972 1273 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 PPP2R5AQ15172 486 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 LRRC41Q15345 812 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 ARHGAP44Q17R89 818 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 TRIM68Q6AZZ1 485 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 WDR93Q6P2C0 686 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 RUBCNQ92622 972 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 MCUR1Q96AQ8 359 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 HPS5Q9UPZ3 1129 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 ABCA9Q8IUA7 1624 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 GMNCA6NCL1 334 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 ZNF185O15231 689 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 BCRP11274 1271 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 EIF3BP55884 814 aaKnown RBP16.03■□□□□ 0.16
VPS36-207ENST00000611132 FOXO4P98177 505 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 SCARF1Q14162 830 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 KLHL29Q96CT2 875 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 ADAMTS1Q9UHI8 967 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 HHATQ5VTY9 493 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 TMTC3Q6ZXV5 915 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 FAM133AQ8N9E0 248 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 TTLL11Q8NHH1 800 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 WDR66Q8TBY9 1149 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 SPATS2LQ9NUQ6 558 aaKnown RBP16.03■□□□□ 0.16
VPS36-207ENST00000611132 STK17AQ9UEE5 414 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 PPP1R37O75864 691 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 EIF6P56537 245 aaKnown RBP16.03■□□□□ 0.16
VPS36-207ENST00000611132 ACTN3Q08043 901 aaPredicted RBP16.03■□□□□ 0.16
VPS36-207ENST00000611132 PTPAQ15257 358 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 NBPF9Q3BBW0 867 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 TPTE2Q6XPS3 522 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 ATP6V1G3Q96LB4 118 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 RUNDC3BQ96NL0 473 aa16.03■□□□□ 0.16
VPS36-207ENST00000611132 METTL14Q9HCE5 456 aaKnown RBP16.02■□□□□ 0.16
VPS36-207ENST00000611132 PALMO75781 387 aa16.02■□□□□ 0.16
VPS36-207ENST00000611132 KRT15P19012 456 aa16.02■□□□□ 0.16
VPS36-207ENST00000611132 PLTPP55058 493 aa16.02■□□□□ 0.16
VPS36-207ENST00000611132 LRRC63Q05C16 580 aa16.02■□□□□ 0.16
VPS36-207ENST00000611132 AP1ARQ63HQ0 302 aa16.02■□□□□ 0.16
VPS36-207ENST00000611132 MAPKAPK5Q8IW41 473 aa16.02■□□□□ 0.16
VPS36-207ENST00000611132 BICD1Q96G01 975 aa16.02■□□□□ 0.16
VPS36-207ENST00000611132 KLC4Q9NSK0 619 aa16.02■□□□□ 0.16
VPS36-207ENST00000611132 ATP8A2Q9NTI2 1148 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms