RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 GALNT17Q6IS24 598 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 HS2ST1Q7LGA3 356 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 CPLX4Q7Z7G2 160 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 CDCA7Q9BWT1 371 aaPredicted RBP7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 JRKLQ9Y4A0 524 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 DUSP10Q9Y6W6 482 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 RGPD8O14715 1765 aaPredicted RBP7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 H3BQF6 201 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 MEIS1O00470 390 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 HEXIM1O94992 359 aaKnown RBP7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 FGFR2P21802 821 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 CDK8P49336 464 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 RCAN1P53805 252 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 PABPC4Q13310 644 aaKnown RBP eCLIP7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 NKX1-1Q15270 411 aaPredicted RBP7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 PKN1Q16512 942 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 TBC1D9BQ66K14 1250 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 PEX26Q7Z412 305 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 CCDC170Q8IYT3 715 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 ADSSL1Q8N142 457 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 FAM133AQ8N9E0 248 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 RETREG2Q8NC44 543 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 MTA3Q9BTC8 594 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 TMOD2Q9NZR1 351 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 GOLGA6L10A0A0M3HER8 536 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 GFPT1Q06210 699 aaPredicted RBP7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 CETN1Q12798 172 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 ZYXQ15942 572 aaKnown RBP7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 ARHGAP44Q17R89 818 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 VWA3BQ502W6 1294 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 TMC4Q7Z404 712 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 DAAM2Q86T65 1068 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 CEP57Q86XR8 500 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 POTEDQ86YR6 584 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 U2AF1L4Q8WU68 220 aaKnown RBP7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 PPM1EQ8WY54 764 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 GJA10Q969M2 543 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 AK8Q96MA6 479 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 USP40Q9NVE5 1235 aa7.58□□□□□ -1.2
SYNPO2-206ENST00000610556 CNTNAP5Q8WYK1 1306 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 LRRC53A6NM62 1247 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 USP17L5A8MUK1 530 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 E7EVH7 732 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 WNT7AO00755 349 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 HGSO14964 777 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 EPB41P11171 864 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 NEFHP12036 1026 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 SARSP49591 514 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 USP14P54578 494 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 MDM2Q00987 491 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 MAP2K1Q02750 393 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 EVX2Q03828 476 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 LLGL1Q15334 1064 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 SEC23AQ15436 765 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 DOK7Q18PE1 504 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 UHMK1Q8TAS1 419 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 DDX12PQ92771 950 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 CCDC114Q96M63 670 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 DPH5Q9H2P9 285 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 ARMCX3Q9UH62 379 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 PACSIN2Q9UNF0 486 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 DNM3Q9UQ16 869 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 PIK3C2AO00443 1686 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 NALCNQ8IZF0 1738 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 JCADQ9P266 1359 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 LAD1O00515 517 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 CAMTA2O94983 1202 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 ABL1P00519 1130 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 RPL13P26373 211 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 FKBP3Q00688 224 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 TBX2Q13207 712 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 CCDC121Q6ZUS5 278 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 CLEC10AQ8IUN9 316 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 LMBR1Q8WVP7 490 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 TRIM9Q9C026 710 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 CUEDC2Q9H467 287 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 NFU1Q9UMS0 254 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 DDX39AO00148 427 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 TDP2O95551 362 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 PLEKP08567 350 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 NR2F2P24468 414 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 ITPK1Q13572 414 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 BEND6Q5SZJ8 279 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 CERS3Q8IU89 383 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 ARFGAP2Q8N6H7 521 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 VGLL2Q8N8G2 317 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 CEP95Q96GE4 821 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 LACRTQ9GZZ8 138 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 CAPN11Q9UMQ6 739 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 PCDHA6Q9UN73 950 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 PCDHA8Q9Y5H6 950 aa7.57□□□□□ -1.2
SYNPO2-206ENST00000610556 CRYBG1Q9Y4K1 1723 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 CFBP00751 764 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 XRCC5P13010 732 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 GJC1P36383 396 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 PMS1P54277 932 aaKnown RBP7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 SNAP25P60880 206 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 PDCLQ13371 301 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 KRT71Q3SY84 523 aa7.56□□□□□ -1.2
SYNPO2-206ENST00000610556 HAUS3Q68CZ6 603 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms