RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 PRDM12Q9H4Q4 367 aa12.25□□□□□ -0.45
FARP1-240ENST00000602263 SLC28A3Q9HAS3 691 aa12.25□□□□□ -0.45
FARP1-240ENST00000602263 TRMT13Q9NUP7 481 aaKnown RBP12.25□□□□□ -0.45
FARP1-240ENST00000602263 CXXC1Q9P0U4 656 aaPredicted RBP12.25□□□□□ -0.45
FARP1-240ENST00000602263 TNKSO95271 1327 aa12.25□□□□□ -0.45
FARP1-240ENST00000602263 DHX16O60231 1041 aaKnown RBP12.24□□□□□ -0.45
FARP1-240ENST00000602263 KDM4AO75164 1064 aa12.24□□□□□ -0.45
FARP1-240ENST00000602263 ABCB11O95342 1321 aa12.24□□□□□ -0.45
FARP1-240ENST00000602263 TXNP10599 105 aaKnown RBP12.24□□□□□ -0.45
FARP1-240ENST00000602263 EDNRBP24530 442 aa12.24□□□□□ -0.45
FARP1-240ENST00000602263 TTLL4Q14679 1199 aa12.24□□□□□ -0.45
FARP1-240ENST00000602263 CDC37Q16543 378 aaPredicted RBP12.24□□□□□ -0.45
FARP1-240ENST00000602263 CWC27Q6UX04 472 aaKnown RBP12.24□□□□□ -0.45
FARP1-240ENST00000602263 PLEKHM2Q8IWE5 1019 aa12.24□□□□□ -0.45
FARP1-240ENST00000602263 RGS22Q8NE09 1264 aa12.24□□□□□ -0.45
FARP1-240ENST00000602263 SCLYQ96I15 445 aa12.24□□□□□ -0.45
FARP1-240ENST00000602263 MAF1Q9H063 256 aa12.24□□□□□ -0.45
FARP1-240ENST00000602263 SLC4A7Q9Y6M7 1214 aa12.24□□□□□ -0.45
FARP1-240ENST00000602263 TET1Q8NFU7 2136 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 TRANK1O15050 2925 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 CYP2C9P11712 490 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 ACTN1P12814 892 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 NUCB1Q02818 461 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 IMMTQ16891 758 aaKnown RBP12.23□□□□□ -0.45
FARP1-240ENST00000602263 ASPRV1Q53RT3 343 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 TJAP1Q5JTD0 557 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 NFRKBQ6P4R8 1299 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 MCF2L2Q86YR7 1114 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 USP38Q8NB14 1042 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 PPM1EQ8WY54 764 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 UBAC1Q9BSL1 405 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 UBA5Q9GZZ9 404 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 NKX2-4Q9H2Z4 354 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 OSBPL3Q9H4L5 887 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 CTNNA3Q9UI47 895 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 NOD1Q9Y239 953 aa12.23□□□□□ -0.45
FARP1-240ENST00000602263 BAZ2BQ9UIF8 2168 aaKnown RBP12.23□□□□□ -0.45
FARP1-240ENST00000602263 A6NJR5 290 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 B4E1Z4 1266 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 PARP1P09874 1014 aaKnown RBP12.22□□□□□ -0.45
FARP1-240ENST00000602263 ATP2A2P16615 1042 aaKnown RBP12.22□□□□□ -0.45
FARP1-240ENST00000602263 IGFBP4P22692 258 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 RFC2P35250 354 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 PTPN11Q06124 597 aaPredicted RBP12.22□□□□□ -0.45
FARP1-240ENST00000602263 NBPF20Q3BBV1 942 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 PPP2R2DQ66LE6 453 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 DEFB128Q7Z7B8 93 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 ADGRF4Q8IZF3 695 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 RETREG2Q8NC44 543 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 NSUN6Q8TEA1 469 aaKnown RBP12.22□□□□□ -0.45
FARP1-240ENST00000602263 COPS5Q92905 334 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 ZSCAN10Q96SZ4 725 aaPredicted RBP12.22□□□□□ -0.45
FARP1-240ENST00000602263 DSCC1Q9BVC3 393 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 KRT23Q9C075 422 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 CPVLQ9H3G5 476 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 CNNM2Q9H8M5 875 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 PCDHA11Q9Y5I1 949 aa12.22□□□□□ -0.45
FARP1-240ENST00000602263 PRRC2BQ5JSZ5 2229 aaKnown RBP12.21□□□□□ -0.45
FARP1-240ENST00000602263 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
FARP1-240ENST00000602263 CHMP4BP1P59074 171 aa12.21□□□□□ -0.45
FARP1-240ENST00000602263 BFSP2Q13515 415 aa12.21□□□□□ -0.45
FARP1-240ENST00000602263 FBXO11Q86XK2 927 aa12.21□□□□□ -0.45
FARP1-240ENST00000602263 CCDC155Q8N6L0 562 aa12.21□□□□□ -0.45
FARP1-240ENST00000602263 ENAHQ8N8S7 591 aaPredicted RBP12.21□□□□□ -0.45
FARP1-240ENST00000602263 SYTL5Q8TDW5 730 aaPredicted RBP12.21□□□□□ -0.45
FARP1-240ENST00000602263 ANKS1AQ92625 1134 aa12.21□□□□□ -0.45
FARP1-240ENST00000602263 YTHDC1Q96MU7 727 aaKnown RBP12.21□□□□□ -0.45
FARP1-240ENST00000602263 IWS1Q96ST2 819 aa12.21□□□□□ -0.45
FARP1-240ENST00000602263 THEGQ9P2T0 379 aa12.21□□□□□ -0.45
FARP1-240ENST00000602263 YBX2Q9Y2T7 364 aaKnown RBP12.21□□□□□ -0.45
FARP1-240ENST00000602263 MRPL11Q9Y3B7 192 aaKnown RBP12.21□□□□□ -0.45
FARP1-240ENST00000602263 MUC3AQ02505 3323 aa12.21□□□□□ -0.46
FARP1-240ENST00000602263 ARIH2O95376 493 aa12.2□□□□□ -0.46
FARP1-240ENST00000602263 GH1P01241 217 aa12.2□□□□□ -0.46
FARP1-240ENST00000602263 RABGGTBP53611 331 aa12.2□□□□□ -0.46
FARP1-240ENST00000602263 STXBP2Q15833 593 aa12.2□□□□□ -0.46
FARP1-240ENST00000602263 QRICH1Q2TAL8 776 aa12.2□□□□□ -0.46
FARP1-240ENST00000602263 IFIT1BQ5T764 474 aaKnown RBP12.2□□□□□ -0.46
FARP1-240ENST00000602263 ARHGEF16Q5VV41 709 aa12.2□□□□□ -0.46
FARP1-240ENST00000602263 SEPT14Q6ZU15 432 aa12.2□□□□□ -0.46
FARP1-240ENST00000602263 IL27Q8NEV9 243 aa12.2□□□□□ -0.46
FARP1-240ENST00000602263 ATXN2LQ8WWM7 1075 aaKnown RBP12.2□□□□□ -0.46
FARP1-240ENST00000602263 RMDN3Q96TC7 470 aa12.2□□□□□ -0.46
FARP1-240ENST00000602263 FTOQ9C0B1 505 aaKnown RBP eCLIP12.2□□□□□ -0.46
FARP1-240ENST00000602263 VAT1LQ9HCJ6 419 aa12.2□□□□□ -0.46
FARP1-240ENST00000602263 BDP1A6H8Y1 2624 aa12.19□□□□□ -0.46
FARP1-240ENST00000602263 IGHDP01880 384 aa12.19□□□□□ -0.46
FARP1-240ENST00000602263 MMP3P08254 477 aa12.19□□□□□ -0.46
FARP1-240ENST00000602263 CASTP20810 708 aaKnown RBP12.19□□□□□ -0.46
FARP1-240ENST00000602263 ADGRE1Q14246 886 aa12.19□□□□□ -0.46
FARP1-240ENST00000602263 CCDC85BQ15834 202 aaPredicted RBP12.19□□□□□ -0.46
FARP1-240ENST00000602263 PTGISQ16647 500 aa12.19□□□□□ -0.46
FARP1-240ENST00000602263 TMEM67Q5HYA8 995 aa12.19□□□□□ -0.46
FARP1-240ENST00000602263 CCDC62Q6P9F0 684 aa12.19□□□□□ -0.46
FARP1-240ENST00000602263 CAGE1Q8TC20 777 aa12.19□□□□□ -0.46
FARP1-240ENST00000602263 AFG1LQ8WV93 481 aa12.19□□□□□ -0.46
FARP1-240ENST00000602263 TAAR1Q96RJ0 339 aa12.19□□□□□ -0.46
FARP1-240ENST00000602263 SLC9A7Q96T83 725 aa12.19□□□□□ -0.46
FARP1-240ENST00000602263 AMNQ9BXJ7 453 aa12.19□□□□□ -0.46
FARP1-240ENST00000602263 TSPYL2Q9H2G4 693 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms