RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 A0A087X0B3 334 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 ATP2A1O14983 1001 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 SLFN14P0C7P3 912 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 UBA7P41226 1012 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 TECP42680 631 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 MDM2Q00987 491 aaPredicted RBP19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 PDIA5Q14554 519 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 Q4G0T1 1027 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 DHX58Q96C10 678 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 RAB34Q9BZG1 259 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 TRAF5O00463 557 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 MARCH6O60337 910 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 CAVIN2O95810 425 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 HOXA7P31268 230 aaPredicted RBP19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 CEP57L1Q8IYX8 460 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 IGSF22Q8N9C0 903 aa19.95■□□□□ 0.78
SHKBP1-224ENST00000600718 FKBP1BP68106 108 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 STX1AQ16623 288 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 GADL1Q6ZQY3 521 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 HAS1Q92839 578 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 OPTNQ96CV9 577 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 SLC10A4Q96EP9 437 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 WNK4Q96J92 1243 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 TRERF1Q96PN7 1200 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 ANO10Q9NW15 660 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 CCDC39Q9UFE4 941 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 SRCAPQ6ZRS2 3230 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 SPDYE16A6NNV3 312 aaPredicted RBP19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 NFIBO00712 420 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 TBX3O15119 743 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 ZRSR1Q15695 479 aaKnown RBP19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 TKFCQ3LXA3 575 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 MUM1L1Q5H9M0 696 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 TREML2Q5T2D2 321 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 RNF214Q8ND24 703 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 KCNMB3Q9NPA1 279 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 TUBE1Q9UJT0 475 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 RABGAP1Q9Y3P9 1069 aa19.94■□□□□ 0.78
SHKBP1-224ENST00000600718 PARP14Q460N5 1801 aa19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 MYH7BA7E2Y1 1941 aa19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 CDC25AP30304 524 aa19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 ZNF76P36508 570 aa19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 TMEM132BQ14DG7 1078 aa19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 POSTNQ15063 836 aa19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 E2F4Q16254 413 aa19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 UVSSAQ2YD98 709 aa19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 ANO6Q4KMQ2 910 aa19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 SLFN12Q8IYM2 578 aa19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 ERCC4Q92889 916 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 MAF1Q9H063 256 aa19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 TTC12Q9H892 705 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 ZNF408Q9H9D4 720 aa19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 ZNF214Q9UL59 606 aaPredicted RBP19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 RLFQ13129 1914 aa19.93■□□□□ 0.78
SHKBP1-224ENST00000600718 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 PNOCQ13519 176 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 FASTKD5Q7L8L6 764 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 SH3RF1Q7Z6J0 888 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 CABP7Q86V35 215 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 TEX13BQ9BXU2 312 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 HOMER2Q9NSB8 354 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 LRWD1Q9UFC0 647 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 PCDHA12Q9UN75 941 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 SMCHD1A6NHR9 2005 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 PP2D1A8MPX8 630 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 PRR16Q569H4 304 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 RRAGBQ5VZM2 374 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 SNRNP48Q6IEG0 339 aaKnown RBP19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 MB21D1Q8N884 522 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 PAGE5Q96GU1 130 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 FAM20AQ96MK3 541 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 DISC1Q9NRI5 854 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 RNF146Q9NTX7 359 aa19.92■□□□□ 0.78
SHKBP1-224ENST00000600718 FMR1Q06787 632 aaKnown RBP eCLIP19.91■□□□□ 0.78
SHKBP1-224ENST00000600718 KARSQ15046 597 aaKnown RBP19.91■□□□□ 0.78
SHKBP1-224ENST00000600718 FAM200AQ8TCP9 573 aa19.91■□□□□ 0.78
SHKBP1-224ENST00000600718 RRAGDQ9NQL2 400 aaPredicted RBP19.91■□□□□ 0.78
SHKBP1-224ENST00000600718 AGTPBP1Q9UPW5 1226 aa19.91■□□□□ 0.78
SHKBP1-224ENST00000600718 RIPK3Q9Y572 518 aa19.91■□□□□ 0.78
SHKBP1-224ENST00000600718 PCDHA5Q9Y5H7 936 aa19.91■□□□□ 0.78
SHKBP1-224ENST00000600718 RPTORQ8N122 1335 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 FAM86B1E9PN63 330 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 FOXN1O15353 648 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 FAM86B2P0C5J1 330 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 STAT3P40763 770 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 STAT6P42226 847 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 NLRP12P59046 1061 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 PDXDC2PQ6P474 469 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 RASSF8Q8NHQ8 419 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 ETNPPLQ8TBG4 499 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 SYTL5Q8TDW5 730 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 LENG9Q96B70 501 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 GBA2Q9HCG7 927 aaPredicted RBP19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 PABPC4Q13310 644 aaKnown RBP eCLIP19.9■□□□□ 0.781e-9■■■■□ 22.8
SHKBP1-224ENST00000600718 LBX2Q6XYB7 198 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 RNF207Q6ZRF8 634 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 C2orf69Q8N8R5 385 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 CALML4Q96GE6 196 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 CUEDC2Q9H467 287 aa19.9■□□□□ 0.78
SHKBP1-224ENST00000600718 NMRK2Q9NPI5 230 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms