RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 CTCFLQ8NI51 663 aaPredicted RBP10.8□□□□□ -0.68
FARP1-226ENST00000599040 IGDCC4Q8TDY8 1250 aa10.8□□□□□ -0.68
FARP1-226ENST00000599040 VTI1AQ96AJ9 217 aa10.8□□□□□ -0.68
FARP1-226ENST00000599040 TMEM47Q9BQJ4 181 aa10.8□□□□□ -0.68
FARP1-226ENST00000599040 RANBP17Q9H2T7 1088 aaKnown RBP10.8□□□□□ -0.68
FARP1-226ENST00000599040 KAT14Q9H8E8 782 aa10.8□□□□□ -0.68
FARP1-226ENST00000599040 LY9Q9HBG7 655 aa10.8□□□□□ -0.68
FARP1-226ENST00000599040 INCENPQ9NQS7 918 aa10.8□□□□□ -0.68
FARP1-226ENST00000599040 RBM28Q9NW13 759 aaKnown RBP10.8□□□□□ -0.68
FARP1-226ENST00000599040 A0A0U1RQG5 324 aaPredicted RBP10.79□□□□□ -0.68
FARP1-226ENST00000599040 STX6O43752 255 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 CABYRO75952 493 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 DDAH1O94760 285 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 LARGE1O95461 756 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 KIF5BP33176 963 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 GJA9P57773 515 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 CCT2P78371 535 aaKnown RBP10.79□□□□□ -0.68
FARP1-226ENST00000599040 TNFAIP2Q03169 654 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 TRIM29Q14134 588 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 RTN1Q16799 776 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 CSPP1Q1MSJ5 1256 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 GNASQ5JWF2 1037 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 GPATCH4Q5T3I0 446 aaKnown RBP10.79□□□□□ -0.68
FARP1-226ENST00000599040 FAM109BQ6ICB4 259 aaPredicted RBP10.79□□□□□ -0.68
FARP1-226ENST00000599040 NSMFQ6X4W1 530 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 MICU3Q86XE3 530 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 DGKHQ86XP1 1220 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 BADQ92934 168 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 LENG1Q96BZ8 264 aaPredicted RBP10.79□□□□□ -0.68
FARP1-226ENST00000599040 SEZ6LQ9BYH1 1024 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 AP5M1Q9H0R1 490 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 UPF3AQ9H1J1 476 aaKnown RBP10.79□□□□□ -0.68
FARP1-226ENST00000599040 VTA1Q9NP79 307 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 TMEM39AQ9NV64 488 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 CYP39A1Q9NYL5 469 aa10.79□□□□□ -0.68
FARP1-226ENST00000599040 PTPDC1A2A3K4 754 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 VPS37CA5D8V6 355 aaPredicted RBP10.78□□□□□ -0.68
FARP1-226ENST00000599040 B4DLN1 442 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 KIAA0355O15063 1070 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 TLR3O15455 904 aaKnown RBP10.78□□□□□ -0.68
FARP1-226ENST00000599040 ASGR1P07306 291 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 PDHBP11177 359 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 XBP1P17861 261 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 GNAQP50148 359 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 MRPL12P52815 198 aaKnown RBP10.78□□□□□ -0.68
FARP1-226ENST00000599040 CNTN2Q02246 1040 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 SCRN1Q12765 414 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 ZNF654Q8IZM8 581 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 RGS22Q8NE09 1264 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 FGD4Q96M96 766 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 ZKSCAN3Q9BRR0 538 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 ANP32EQ9BTT0 268 aa10.78□□□□□ -0.68
FARP1-226ENST00000599040 A0A0C4DFX4 3053 aa10.77□□□□□ -0.68
FARP1-226ENST00000599040 TRIM43BA6NCK2 446 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 SOWAHBA6NEL2 793 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 BRD1O95696 1058 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 ZSCAN22P10073 491 aaPredicted RBP10.77□□□□□ -0.69
FARP1-226ENST00000599040 SYT1P21579 422 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 SLC16A2P36021 539 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 SNAP25P60880 206 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 NKX3-2P78367 333 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 FPGSQ05932 587 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 SSRP1Q08945 709 aaKnown RBP10.77□□□□□ -0.69
FARP1-226ENST00000599040 ZNF543Q08ER8 600 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 MUM1L1Q5H9M0 696 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 ZNF697Q5TEC3 545 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 IQSEC1Q6DN90 963 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 CCSAPQ6IQ19 270 aaPredicted RBP10.77□□□□□ -0.69
FARP1-226ENST00000599040 TLK2Q86UE8 772 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 ENAHQ8N8S7 591 aaPredicted RBP10.77□□□□□ -0.69
FARP1-226ENST00000599040 TNPO1Q92973 898 aaKnown RBP10.77□□□□□ -0.69
FARP1-226ENST00000599040 TRIM43Q96BQ3 446 aaPredicted RBP10.77□□□□□ -0.69
FARP1-226ENST00000599040 MAF1Q9H063 256 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 KATNBL1Q9H079 304 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 GPCPD1Q9NPB8 672 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 BRPF3Q9ULD4 1205 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 STXBP5LQ9Y2K9 1186 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 Q9Y3F1 56 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 FRMPD2Q68DX3 1309 aaPredicted RBP10.77□□□□□ -0.69
FARP1-226ENST00000599040 NID2Q14112 1375 aa10.77□□□□□ -0.69
FARP1-226ENST00000599040 ARVCFO00192 962 aa10.76□□□□□ -0.69
FARP1-226ENST00000599040 TIMP1P01033 207 aa10.76□□□□□ -0.69
FARP1-226ENST00000599040 SNHG28P0DPA3 235 aa10.76□□□□□ -0.69
FARP1-226ENST00000599040 NCLP19338 710 aaKnown RBP10.76□□□□□ -0.69
FARP1-226ENST00000599040 SMAD3P84022 425 aaKnown RBP10.76□□□□□ -0.69
FARP1-226ENST00000599040 BAATQ14032 418 aaPredicted RBP10.76□□□□□ -0.69
FARP1-226ENST00000599040 SEC23AQ15436 765 aa10.76□□□□□ -0.69
FARP1-226ENST00000599040 SHHQ15465 462 aa10.76□□□□□ -0.69
FARP1-226ENST00000599040 NFKBIBQ15653 356 aa10.76□□□□□ -0.69
FARP1-226ENST00000599040 FSCN1Q16658 493 aaKnown RBP10.76□□□□□ -0.69
FARP1-226ENST00000599040 BRDTQ58F21 947 aaPredicted RBP10.76□□□□□ -0.69
FARP1-226ENST00000599040 TTBK2Q6IQ55 1244 aa10.76□□□□□ -0.69
FARP1-226ENST00000599040 RNF207Q6ZRF8 634 aa10.76□□□□□ -0.69
FARP1-226ENST00000599040 RASGRP2Q7LDG7 609 aa10.76□□□□□ -0.69
FARP1-226ENST00000599040 SH3RF1Q7Z6J0 888 aa10.76□□□□□ -0.69
FARP1-226ENST00000599040 FANCBQ8NB91 859 aa10.76□□□□□ -0.69
FARP1-226ENST00000599040 PNMA1Q8ND90 353 aa10.76□□□□□ -0.69
FARP1-226ENST00000599040 SLC17A8Q8NDX2 589 aa10.76□□□□□ -0.69
FARP1-226ENST00000599040 NSUN7Q8NE18 718 aaKnown RBP10.76□□□□□ -0.69
FARP1-226ENST00000599040 SMARCC2Q8TAQ2 1214 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms