RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ACVR2BQ13705 512 aa22.63■■□□□ 1.21
SHKBP1-214ENST00000597396 ME3Q16798 604 aa22.63■■□□□ 1.21
SHKBP1-214ENST00000597396 ARHGEF16Q5VV41 709 aa22.63■■□□□ 1.21
SHKBP1-214ENST00000597396 PPP1R18Q6NYC8 613 aa22.63■■□□□ 1.21
SHKBP1-214ENST00000597396 NSUN6Q8TEA1 469 aaKnown RBP22.63■■□□□ 1.21
SHKBP1-214ENST00000597396 PSTPIP2Q9H939 334 aa22.63■■□□□ 1.21
SHKBP1-214ENST00000597396 BARHL2Q9NY43 387 aa22.63■■□□□ 1.21
SHKBP1-214ENST00000597396 STXBP3O00186 592 aa22.62■■□□□ 1.21
SHKBP1-214ENST00000597396 LARGE1O95461 756 aa22.62■■□□□ 1.21
SHKBP1-214ENST00000597396 EEPD1Q7L9B9 569 aa22.62■■□□□ 1.21
SHKBP1-214ENST00000597396 MORC4Q8TE76 937 aa22.62■■□□□ 1.21
SHKBP1-214ENST00000597396 LIMCH1Q9UPQ0 1083 aa22.62■■□□□ 1.21
SHKBP1-214ENST00000597396 BRCA2P51587 3418 aa22.62■■□□□ 1.21
SHKBP1-214ENST00000597396 ST18O60284 1047 aa22.61■■□□□ 1.21
SHKBP1-214ENST00000597396 AKR1A1P14550 325 aa22.61■■□□□ 1.21
SHKBP1-214ENST00000597396 EIF2AK2P19525 551 aaKnown RBP22.61■■□□□ 1.21
SHKBP1-214ENST00000597396 PKN1Q16512 942 aa22.61■■□□□ 1.21
SHKBP1-214ENST00000597396 ANO1Q5XXA6 986 aa22.61■■□□□ 1.21
SHKBP1-214ENST00000597396 USP17L6PQ6QN14 398 aa22.61■■□□□ 1.21
SHKBP1-214ENST00000597396 NECAB1Q8N987 351 aa22.61■■□□□ 1.21
SHKBP1-214ENST00000597396 CCDC12Q8WUD4 166 aaPredicted RBP22.61■■□□□ 1.21
SHKBP1-214ENST00000597396 GTF3C6Q969F1 213 aa22.61■■□□□ 1.21
SHKBP1-214ENST00000597396 VTA1Q9NP79 307 aa22.61■■□□□ 1.21
SHKBP1-214ENST00000597396 PXMP2Q9NR77 195 aa22.61■■□□□ 1.21
SHKBP1-214ENST00000597396 FAM184BQ9ULE4 1060 aa22.61■■□□□ 1.21
SHKBP1-214ENST00000597396 DEXIO95424 95 aa22.6■■□□□ 1.21
SHKBP1-214ENST00000597396 CAPN2P17655 700 aa22.6■■□□□ 1.21
SHKBP1-214ENST00000597396 TYW1BQ6NUM6 668 aa22.6■■□□□ 1.21
SHKBP1-214ENST00000597396 FBXO16Q8IX29 292 aaPredicted RBP22.6■■□□□ 1.21
SHKBP1-214ENST00000597396 SHISA4Q96DD7 197 aa22.6■■□□□ 1.21
SHKBP1-214ENST00000597396 IWS1Q96ST2 819 aa22.6■■□□□ 1.21
SHKBP1-214ENST00000597396 KATNBL1Q9H079 304 aa22.6■■□□□ 1.21
SHKBP1-214ENST00000597396 CRISPLD2Q9H0B8 497 aa22.6■■□□□ 1.21
SHKBP1-214ENST00000597396 MKI67P46013 3256 aaKnown RBP22.6■■□□□ 1.21
SHKBP1-214ENST00000597396 PIK3CDO00329 1044 aa22.59■■□□□ 1.21
SHKBP1-214ENST00000597396 MEIS2O14770 477 aa22.59■■□□□ 1.21
SHKBP1-214ENST00000597396 EDNRBP24530 442 aa22.59■■□□□ 1.21
SHKBP1-214ENST00000597396 ADCY7P51828 1080 aa22.59■■□□□ 1.21
SHKBP1-214ENST00000597396 CCDC144BQ3MJ40 725 aa22.59■■□□□ 1.21
SHKBP1-214ENST00000597396 LHX8Q68G74 356 aa22.59■■□□□ 1.21
SHKBP1-214ENST00000597396 IL27Q8NEV9 243 aa22.59■■□□□ 1.21
SHKBP1-214ENST00000597396 ZSCAN31Q96LW9 406 aaPredicted RBP22.59■■□□□ 1.21
SHKBP1-214ENST00000597396 SMCO2A6NFE2 343 aa22.58■■□□□ 1.21
SHKBP1-214ENST00000597396 RARBP10826 455 aa22.58■■□□□ 1.21
SHKBP1-214ENST00000597396 STXBP2Q15833 593 aa22.58■■□□□ 1.21
SHKBP1-214ENST00000597396 UBE2SQ16763 222 aa22.58■■□□□ 1.21
SHKBP1-214ENST00000597396 CCDC148Q8NFR7 591 aa22.58■■□□□ 1.21
SHKBP1-214ENST00000597396 GLT8D2Q9H1C3 349 aa22.58■■□□□ 1.21
SHKBP1-214ENST00000597396 RIC8AQ9NPQ8 531 aa22.58■■□□□ 1.21
SHKBP1-214ENST00000597396 OGDHLQ9ULD0 1010 aa22.58■■□□□ 1.21
SHKBP1-214ENST00000597396 MYH7BA7E2Y1 1941 aa22.57■■□□□ 1.2
SHKBP1-214ENST00000597396 SPDYE3A6NKU9 549 aa22.57■■□□□ 1.2
SHKBP1-214ENST00000597396 NR3C2P08235 984 aa22.57■■□□□ 1.2
SHKBP1-214ENST00000597396 MYCLP12524 364 aaPredicted RBP22.57■■□□□ 1.2
SHKBP1-214ENST00000597396 PDCD2LQ9BRP1 358 aa22.57■■□□□ 1.2
SHKBP1-214ENST00000597396 STK36Q9NRP7 1315 aa22.57■■□□□ 1.2
SHKBP1-214ENST00000597396 CCND2P30279 289 aa22.56■■□□□ 1.2
SHKBP1-214ENST00000597396 ADCYAP1R1P41586 468 aa22.56■■□□□ 1.2
SHKBP1-214ENST00000597396 PGM5Q15124 567 aa22.56■■□□□ 1.2
SHKBP1-214ENST00000597396 TEX2Q8IWB9 1127 aa22.56■■□□□ 1.2
SHKBP1-214ENST00000597396 LENG1Q96BZ8 264 aaPredicted RBP22.56■■□□□ 1.2
SHKBP1-214ENST00000597396 C6orf50Q9HD87 102 aa22.56■■□□□ 1.2
SHKBP1-214ENST00000597396 PDGFCQ9NRA1 345 aa22.56■■□□□ 1.2
SHKBP1-214ENST00000597396 SH2B1Q9NRF2 756 aaPredicted RBP22.56■■□□□ 1.2
SHKBP1-214ENST00000597396 VPS54Q9P1Q0 977 aa22.56■■□□□ 1.2
SHKBP1-214ENST00000597396 PCDH10Q9P2E7 1040 aa22.56■■□□□ 1.2
SHKBP1-214ENST00000597396 ESYT2A0FGR8 921 aa22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 FARP2O94887 1054 aaPredicted RBP22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 CTDNEP1O95476 244 aa22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 MYCNP04198 464 aaPredicted RBP22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 TNFAIP2Q03169 654 aa22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 HABP4Q5JVS0 413 aaKnown RBP22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 IQSEC1Q6DN90 963 aa22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 TAPT1Q6NXT6 567 aa22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 CCDC83Q8IWF9 413 aa22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 ANKLE1Q8NAG6 615 aa22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 EHMT1Q9H9B1 1298 aa22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 XPNPEP3Q9NQH7 507 aa22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 SH3GLB2Q9NR46 395 aa22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 ORC3Q9UBD5 711 aaPredicted RBP22.55■■□□□ 1.2
SHKBP1-214ENST00000597396 DTNBO60941 627 aa22.54■■□□□ 1.2
SHKBP1-214ENST00000597396 DUSP11O75319 330 aaKnown RBP22.54■■□□□ 1.2
SHKBP1-214ENST00000597396 GNA11P29992 359 aa22.54■■□□□ 1.2
SHKBP1-214ENST00000597396 ARRDC4Q8NCT1 418 aa22.54■■□□□ 1.2
SHKBP1-214ENST00000597396 IL31RAQ8NI17 732 aa22.54■■□□□ 1.2
SHKBP1-214ENST00000597396 SCFD2Q8WU76 684 aa22.54■■□□□ 1.2
SHKBP1-214ENST00000597396 ZMYND12Q9H0C1 365 aa22.54■■□□□ 1.2
SHKBP1-214ENST00000597396 PCDHA6Q9UN73 950 aa22.54■■□□□ 1.2
SHKBP1-214ENST00000597396 PCDHA8Q9Y5H6 950 aa22.54■■□□□ 1.2
SHKBP1-214ENST00000597396 FRMPD4Q14CM0 1322 aa22.54■■□□□ 1.2
SHKBP1-214ENST00000597396 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.53■■□□□ 1.2
SHKBP1-214ENST00000597396 ADCY6O43306 1168 aa22.53■■□□□ 1.2
SHKBP1-214ENST00000597396 EIF3JO75822 258 aaKnown RBP22.53■■□□□ 1.2
SHKBP1-214ENST00000597396 NLRP5P59047 1200 aa22.53■■□□□ 1.2
SHKBP1-214ENST00000597396 SEPT14Q6ZU15 432 aa22.53■■□□□ 1.2
SHKBP1-214ENST00000597396 NSUN7Q8NE18 718 aaKnown RBP22.53■■□□□ 1.2
SHKBP1-214ENST00000597396 BICD2Q8TD16 824 aa22.53■■□□□ 1.2
SHKBP1-214ENST00000597396 WASF1Q92558 559 aa22.53■■□□□ 1.2
SHKBP1-214ENST00000597396 AIFM3Q96NN9 605 aa22.53■■□□□ 1.2
SHKBP1-214ENST00000597396 WDR11Q9BZH6 1224 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms