RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 LAMA3Q16787 3333 aa20.84■□□□□ 0.93
CHMP2A-203ENST00000597209 GRIN2DO15399 1336 aa20.83■□□□□ 0.93
CHMP2A-203ENST00000597209 OPLAHO14841 1288 aa20.83■□□□□ 0.93
CHMP2A-203ENST00000597209 PPP1R11O60927 126 aaPredicted RBP20.83■□□□□ 0.93
CHMP2A-203ENST00000597209 TTLL4Q14679 1199 aa20.83■□□□□ 0.93
CHMP2A-203ENST00000597209 NECTIN1Q15223 517 aa20.83■□□□□ 0.93
CHMP2A-203ENST00000597209 BRDTQ58F21 947 aaPredicted RBP20.83■□□□□ 0.93
CHMP2A-203ENST00000597209 MFSD5Q6N075 450 aa20.83■□□□□ 0.93
CHMP2A-203ENST00000597209 DEFB123Q8N688 67 aa20.83■□□□□ 0.93
CHMP2A-203ENST00000597209 OR6J1Q8NGC5 347 aa20.83■□□□□ 0.93
CHMP2A-203ENST00000597209 RMDN3Q96TC7 470 aa20.83■□□□□ 0.93
CHMP2A-203ENST00000597209 PCDHA1Q9Y5I3 950 aa20.83■□□□□ 0.93
CHMP2A-203ENST00000597209 SLC27A2O14975 620 aa20.82■□□□□ 0.92
CHMP2A-203ENST00000597209 TXNP10599 105 aaKnown RBP20.82■□□□□ 0.92
CHMP2A-203ENST00000597209 STXBP2Q15833 593 aa20.82■□□□□ 0.92
CHMP2A-203ENST00000597209 CCDC62Q6P9F0 684 aa20.82■□□□□ 0.92
CHMP2A-203ENST00000597209 CASC1Q6TDU7 716 aa20.82■□□□□ 0.92
CHMP2A-203ENST00000597209 TMTC2Q8N394 836 aa20.82■□□□□ 0.92
CHMP2A-203ENST00000597209 TMEM87BQ96K49 555 aa20.82■□□□□ 0.92
CHMP2A-203ENST00000597209 LY9Q9HBG7 655 aa20.82■□□□□ 0.92
CHMP2A-203ENST00000597209 PNMA6FA0A0J9YX94 578 aa20.81■□□□□ 0.92
CHMP2A-203ENST00000597209 A6NJR5 290 aa20.81■□□□□ 0.92
CHMP2A-203ENST00000597209 CYTH3O43739 400 aa20.81■□□□□ 0.92
CHMP2A-203ENST00000597209 KPNA6O60684 536 aa20.81■□□□□ 0.92
CHMP2A-203ENST00000597209 DDAH1O94760 285 aa20.81■□□□□ 0.92
CHMP2A-203ENST00000597209 CFBP00751 764 aa20.81■□□□□ 0.92
CHMP2A-203ENST00000597209 SMARCA1P28370 1054 aa20.81■□□□□ 0.92
CHMP2A-203ENST00000597209 MCM5P33992 734 aa20.81■□□□□ 0.92
CHMP2A-203ENST00000597209 EPHB4P54760 987 aa20.81■□□□□ 0.92
CHMP2A-203ENST00000597209 PURAQ00577 322 aaKnown RBP20.81■□□□□ 0.92
CHMP2A-203ENST00000597209 ARHGEF16Q5VV41 709 aa20.81■□□□□ 0.92
CHMP2A-203ENST00000597209 PIGSQ96S52 555 aa20.81■□□□□ 0.92
CHMP2A-203ENST00000597209 PRC1O43663 620 aa20.8■□□□□ 0.92
CHMP2A-203ENST00000597209 PPIGQ13427 754 aaKnown RBP eCLIP20.8■□□□□ 0.921e-6■■■■□ 25.5
CHMP2A-203ENST00000597209 CREB3L3Q68CJ9 461 aa20.8■□□□□ 0.92
CHMP2A-203ENST00000597209 MTG1Q9BT17 334 aaPredicted RBP20.8■□□□□ 0.92
CHMP2A-203ENST00000597209 ANO2Q9NQ90 1003 aa20.8■□□□□ 0.92
CHMP2A-203ENST00000597209 PXMP2Q9NR77 195 aa20.8■□□□□ 0.92
CHMP2A-203ENST00000597209 MTMR10Q9NXD2 777 aa20.8■□□□□ 0.92
CHMP2A-203ENST00000597209 EIF3JO75822 258 aaKnown RBP20.79■□□□□ 0.92
CHMP2A-203ENST00000597209 ARIH2O95376 493 aa20.79■□□□□ 0.92
CHMP2A-203ENST00000597209 NR3C2P08235 984 aa20.79■□□□□ 0.92
CHMP2A-203ENST00000597209 KIF5BP33176 963 aa20.79■□□□□ 0.92
CHMP2A-203ENST00000597209 LIFRP42702 1097 aa20.79■□□□□ 0.92
CHMP2A-203ENST00000597209 PSMC6P62333 389 aa20.79■□□□□ 0.92
CHMP2A-203ENST00000597209 SMAD3P84022 425 aaKnown RBP20.79■□□□□ 0.92
CHMP2A-203ENST00000597209 HOMER1Q86YM7 354 aa20.79■□□□□ 0.92
CHMP2A-203ENST00000597209 ZNF654Q8IZM8 581 aa20.79■□□□□ 0.92
CHMP2A-203ENST00000597209 TMEM199Q8N511 208 aa20.79■□□□□ 0.92
CHMP2A-203ENST00000597209 COPS5Q92905 334 aa20.79■□□□□ 0.92
CHMP2A-203ENST00000597209 GPHNQ9NQX3 736 aaPredicted RBP20.79■□□□□ 0.92
CHMP2A-203ENST00000597209 SH2B2O14492 632 aaPredicted RBP20.78■□□□□ 0.92
CHMP2A-203ENST00000597209 MYL3P08590 195 aa20.78■□□□□ 0.92
CHMP2A-203ENST00000597209 EIF2AK2P19525 551 aaKnown RBP20.78■□□□□ 0.92
CHMP2A-203ENST00000597209 Q7L0L9 218 aa20.78■□□□□ 0.92
CHMP2A-203ENST00000597209 CTCFLQ8NI51 663 aaPredicted RBP20.78■□□□□ 0.92
CHMP2A-203ENST00000597209 RNPC3Q96LT9 517 aaKnown RBP20.78■□□□□ 0.92
CHMP2A-203ENST00000597209 LZTS2Q9BRK4 669 aa20.78■□□□□ 0.92
CHMP2A-203ENST00000597209 PDCD2LQ9BRP1 358 aa20.78■□□□□ 0.92
CHMP2A-203ENST00000597209 SPZ1Q9BXG8 430 aa20.78■□□□□ 0.92
CHMP2A-203ENST00000597209 ALDH8A1Q9H2A2 487 aaPredicted RBP20.78■□□□□ 0.92
CHMP2A-203ENST00000597209 KIAA1217Q5T5P2 1943 aa20.78■□□□□ 0.92
CHMP2A-203ENST00000597209 GH1P01241 217 aa20.77■□□□□ 0.92
CHMP2A-203ENST00000597209 SUPT20HL2P0C7V6 817 aa20.77■□□□□ 0.92
CHMP2A-203ENST00000597209 GNAQP50148 359 aa20.77■□□□□ 0.92
CHMP2A-203ENST00000597209 RNF20Q5VTR2 975 aa20.77■□□□□ 0.92
CHMP2A-203ENST00000597209 SEPT14Q6ZU15 432 aa20.77■□□□□ 0.92
CHMP2A-203ENST00000597209 SKAP1Q86WV1 359 aa20.77■□□□□ 0.92
CHMP2A-203ENST00000597209 PPP1R12CQ9BZL4 782 aa20.77■□□□□ 0.92
CHMP2A-203ENST00000597209 SCN10AQ9Y5Y9 1956 aa20.76■□□□□ 0.91
CHMP2A-203ENST00000597209 GCOM1H8Y6P7 765 aaPredicted RBP20.76■□□□□ 0.91
CHMP2A-203ENST00000597209 B4GALT4O60513 344 aa20.76■□□□□ 0.91
CHMP2A-203ENST00000597209 POLR2MP0CAP2 368 aa20.76■□□□□ 0.91
CHMP2A-203ENST00000597209 CALM1P0DP23 149 aa20.76■□□□□ 0.91
CHMP2A-203ENST00000597209 CALM2P0DP24 149 aa20.76■□□□□ 0.91
CHMP2A-203ENST00000597209 CALM3P0DP25 149 aa20.76■□□□□ 0.91
CHMP2A-203ENST00000597209 PTPN11Q06124 597 aaPredicted RBP20.76■□□□□ 0.91
CHMP2A-203ENST00000597209 LY6KQ17RY6 165 aa20.76■□□□□ 0.91
CHMP2A-203ENST00000597209 VSIG10LQ86VR7 867 aa20.76■□□□□ 0.91
CHMP2A-203ENST00000597209 TRPV6Q9H1D0 765 aa20.76■□□□□ 0.91
CHMP2A-203ENST00000597209 HIPK3Q9H422 1215 aa20.76■□□□□ 0.91
CHMP2A-203ENST00000597209 DDX41Q9UJV9 622 aaKnown RBP20.76■□□□□ 0.91
CHMP2A-203ENST00000597209 CCDC69A6NI79 296 aa20.75■□□□□ 0.91
CHMP2A-203ENST00000597209 CDC45O75419 566 aa20.75■□□□□ 0.91
CHMP2A-203ENST00000597209 CSF2RAP15509 400 aa20.75■□□□□ 0.91
CHMP2A-203ENST00000597209 HOXA13P31271 388 aaPredicted RBP20.75■□□□□ 0.91
CHMP2A-203ENST00000597209 ARHGAP1Q07960 439 aa20.75■□□□□ 0.91
CHMP2A-203ENST00000597209 PGM5Q15124 567 aa20.75■□□□□ 0.91
CHMP2A-203ENST00000597209 TSGA10IPQ3SY00 556 aa20.75■□□□□ 0.91
CHMP2A-203ENST00000597209 NFRKBQ6P4R8 1299 aa20.75■□□□□ 0.91
CHMP2A-203ENST00000597209 KCNV1Q6PIU1 500 aa20.75■□□□□ 0.91
CHMP2A-203ENST00000597209 C16orf59Q7L2K0 433 aa20.75■□□□□ 0.91
CHMP2A-203ENST00000597209 EMID1Q96A84 441 aaPredicted RBP20.75■□□□□ 0.91
CHMP2A-203ENST00000597209 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.75■□□□□ 0.91
CHMP2A-203ENST00000597209 NOC4LQ9BVI4 516 aaKnown RBP20.75■□□□□ 0.91
CHMP2A-203ENST00000597209 MMP3P08254 477 aa20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 CYP2C18P33260 490 aa20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 COL9A3Q14050 684 aaPredicted RBP20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 NBPF20Q3BBV1 942 aa20.74■□□□□ 0.91
CHMP2A-203ENST00000597209 TMEM240Q5SV17 173 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms