RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 CXCL17Q6UXB2 119 aa12.21□□□□□ -0.45
CCDC9-203ENST00000596938 ZNF654Q8IZM8 581 aa12.21□□□□□ -0.45
CCDC9-203ENST00000596938 BADQ92934 168 aa12.21□□□□□ -0.45
CCDC9-203ENST00000596938 PIGSQ96S52 555 aa12.21□□□□□ -0.45
CCDC9-203ENST00000596938 LZTS2Q9BRK4 669 aa12.21□□□□□ -0.45
CCDC9-203ENST00000596938 GPHNQ9NQX3 736 aaPredicted RBP12.21□□□□□ -0.45
CCDC9-203ENST00000596938 COL20A1Q9P218 1284 aa12.21□□□□□ -0.45
CCDC9-203ENST00000596938 LAMA2P24043 3122 aaKnown RBP12.21□□□□□ -0.46
CCDC9-203ENST00000596938 ALPK3Q96L96 1907 aa12.21□□□□□ -0.46
CCDC9-203ENST00000596938 FRMPD3Q5JV73 1810 aa12.21□□□□□ -0.46
CCDC9-203ENST00000596938 CCDC69A6NI79 296 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 SOX1O00570 391 aaPredicted RBP12.2□□□□□ -0.46
CCDC9-203ENST00000596938 KPNA6O60684 536 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 EIF3JO75822 258 aaKnown RBP12.2□□□□□ -0.46
CCDC9-203ENST00000596938 CFBP00751 764 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 CALM1P0DP23 149 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 CALM2P0DP24 149 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 CALM3P0DP25 149 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 TXNP10599 105 aaKnown RBP12.2□□□□□ -0.46
CCDC9-203ENST00000596938 PTGS1P23219 599 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 ITGB8P26012 769 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 GNAQP50148 359 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 CPT1AP50416 773 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 PPP2R5BQ15173 497 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 ARHGEF16Q5VV41 709 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 CCDC62Q6P9F0 684 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 HOMER1Q86YM7 354 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 CTCFLQ8NI51 663 aaPredicted RBP12.2□□□□□ -0.46
CCDC9-203ENST00000596938 SPZ1Q9BXG8 430 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 PXMP2Q9NR77 195 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 TBX21Q9UL17 535 aa12.2□□□□□ -0.46
CCDC9-203ENST00000596938 GRIN2DO15399 1336 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 A6NJR5 290 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 TIMP1P01033 207 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 CD4P01730 458 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 NR3C2P08235 984 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 RAG1P15918 1043 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 EXOSC10Q01780 885 aaKnown RBP12.19□□□□□ -0.46
CCDC9-203ENST00000596938 ITGA7Q13683 1181 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 COL9A3Q14050 684 aaPredicted RBP12.19□□□□□ -0.46
CCDC9-203ENST00000596938 TTLL4Q14679 1199 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 BRDTQ58F21 947 aaPredicted RBP12.19□□□□□ -0.46
CCDC9-203ENST00000596938 NFXL1Q6ZNB6 911 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 SGMS1Q86VZ5 419 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 FAM126BQ8IXS8 530 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 NEK1Q96PY6 1258 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 POLR3EQ9NVU0 708 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 SLC12A7Q9Y666 1083 aa12.19□□□□□ -0.46
CCDC9-203ENST00000596938 GCOM1H8Y6P7 765 aaPredicted RBP12.18□□□□□ -0.46
CCDC9-203ENST00000596938 TLR3O15455 904 aaKnown RBP12.18□□□□□ -0.46
CCDC9-203ENST00000596938 NEFLP07196 543 aa12.18□□□□□ -0.46
CCDC9-203ENST00000596938 POLR2MP0CAP2 368 aa12.18□□□□□ -0.46
CCDC9-203ENST00000596938 PURAQ00577 322 aaKnown RBP12.18□□□□□ -0.46
CCDC9-203ENST00000596938 KRT32Q14532 448 aa12.18□□□□□ -0.46
CCDC9-203ENST00000596938 SHHQ15465 462 aa12.18□□□□□ -0.46
CCDC9-203ENST00000596938 DHX32Q7L7V1 743 aaKnown RBP12.18□□□□□ -0.46
CCDC9-203ENST00000596938 VSIG10LQ86VR7 867 aa12.18□□□□□ -0.46
CCDC9-203ENST00000596938 RASEFQ8IZ41 740 aa12.18□□□□□ -0.46
CCDC9-203ENST00000596938 OR6J1Q8NGC5 347 aa12.18□□□□□ -0.46
CCDC9-203ENST00000596938 RRP36Q96EU6 259 aaKnown RBP12.18□□□□□ -0.46
CCDC9-203ENST00000596938 LRCH3Q96II8 777 aa12.18□□□□□ -0.46
CCDC9-203ENST00000596938 MYL10Q9BUA6 226 aa12.18□□□□□ -0.46
CCDC9-203ENST00000596938 ARIH2O95376 493 aa12.17□□□□□ -0.46
CCDC9-203ENST00000596938 HMGB1P09429 215 aaKnown RBP12.17□□□□□ -0.46
CCDC9-203ENST00000596938 EIF2AK2P19525 551 aaKnown RBP12.17□□□□□ -0.46
CCDC9-203ENST00000596938 HOXA13P31271 388 aaPredicted RBP12.17□□□□□ -0.46
CCDC9-203ENST00000596938 ERICH6BQ5W0A0 696 aa12.17□□□□□ -0.46
CCDC9-203ENST00000596938 MFSD5Q6N075 450 aa12.17□□□□□ -0.46
CCDC9-203ENST00000596938 SEPT14Q6ZU15 432 aa12.17□□□□□ -0.46
CCDC9-203ENST00000596938 SRBD1Q8N5C6 995 aaKnown RBP12.17□□□□□ -0.46
CCDC9-203ENST00000596938 FANCBQ8NB91 859 aa12.17□□□□□ -0.46
CCDC9-203ENST00000596938 COPS5Q92905 334 aa12.17□□□□□ -0.46
CCDC9-203ENST00000596938 KCNB2Q92953 911 aa12.17□□□□□ -0.46
CCDC9-203ENST00000596938 PDCD2LQ9BRP1 358 aa12.17□□□□□ -0.46
CCDC9-203ENST00000596938 MTG1Q9BT17 334 aaPredicted RBP12.17□□□□□ -0.46
CCDC9-203ENST00000596938 DDX41Q9UJV9 622 aaKnown RBP12.17□□□□□ -0.46
CCDC9-203ENST00000596938 GH1P01241 217 aa12.16□□□□□ -0.46
CCDC9-203ENST00000596938 MYL3P08590 195 aa12.16□□□□□ -0.46
CCDC9-203ENST00000596938 TGFB3P10600 412 aa12.16□□□□□ -0.46
CCDC9-203ENST00000596938 PSMC6P62333 389 aa12.16□□□□□ -0.46
CCDC9-203ENST00000596938 FPGSQ05932 587 aa12.16□□□□□ -0.46
CCDC9-203ENST00000596938 LY6KQ17RY6 165 aa12.16□□□□□ -0.46
CCDC9-203ENST00000596938 ADCK5Q3MIX3 580 aa12.16□□□□□ -0.46
CCDC9-203ENST00000596938 C9orf50Q5SZB4 431 aa12.16□□□□□ -0.46
CCDC9-203ENST00000596938 KCNV1Q6PIU1 500 aa12.16□□□□□ -0.46
CCDC9-203ENST00000596938 SYNE3Q6ZMZ3 975 aa12.16□□□□□ -0.46
CCDC9-203ENST00000596938 EMID1Q96A84 441 aaPredicted RBP12.16□□□□□ -0.46
CCDC9-203ENST00000596938 LRRC2Q9BYS8 371 aa12.16□□□□□ -0.46
CCDC9-203ENST00000596938 SEC63Q9UGP8 760 aaKnown RBP12.16□□□□□ -0.46
CCDC9-203ENST00000596938 PIK3CDO00329 1044 aa12.15□□□□□ -0.46
CCDC9-203ENST00000596938 RGS20O76081 388 aa12.15□□□□□ -0.46
CCDC9-203ENST00000596938 PLEKHA8P1O95397 391 aa12.15□□□□□ -0.46
CCDC9-203ENST00000596938 SUPT20HL2P0C7V6 817 aa12.15□□□□□ -0.46
CCDC9-203ENST00000596938 CCND2P30279 289 aa12.15□□□□□ -0.46
CCDC9-203ENST00000596938 EPHB4P54760 987 aa12.15□□□□□ -0.46
CCDC9-203ENST00000596938 ARHGAP1Q07960 439 aa12.15□□□□□ -0.46
CCDC9-203ENST00000596938 LAMC2Q13753 1193 aa12.15□□□□□ -0.46
CCDC9-203ENST00000596938 PGM5Q15124 567 aa12.15□□□□□ -0.46
CCDC9-203ENST00000596938 FAM109BQ6ICB4 259 aaPredicted RBP12.15□□□□□ -0.46
CCDC9-203ENST00000596938 NFRKBQ6P4R8 1299 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms