RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 EPB41L4AQ9HCS5 686 aaPredicted RBP16.33■□□□□ 0.2
SHKBP1-208ENST00000595726 CCPG1Q9ULG6 757 aa16.33■□□□□ 0.2
SHKBP1-208ENST00000595726 PRR12Q9ULL5 1215 aa16.33■□□□□ 0.2
SHKBP1-208ENST00000595726 WDR87Q6ZQQ6 2873 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 A6NJR5 290 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 SELPP16109 830 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 IRS1P35568 1242 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 PTPN11Q06124 597 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 TRIP12Q14669 1992 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 LRRFIP1Q32MZ4 808 aaKnown RBP16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 IER5LQ5T953 404 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 C20orf194Q5TEA3 1177 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 CNKSR3Q6P9H4 555 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 LRRC8DQ7L1W4 858 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 AFAP1L1Q8TED9 768 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 GMCL1Q96IK5 515 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 TANC1Q9C0D5 1861 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 ZBTB40Q9NUA8 1239 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 SYNPO2Q9UMS6 1093 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 MTMR7Q9Y216 660 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 SCN10AQ9Y5Y9 1956 aa16.32■□□□□ 0.2
SHKBP1-208ENST00000595726 C19orf67A6NJJ6 358 aa16.31■□□□□ 0.2
SHKBP1-208ENST00000595726 NFIBO00712 420 aa16.31■□□□□ 0.2
SHKBP1-208ENST00000595726 TFAP4Q01664 338 aa16.31■□□□□ 0.2
SHKBP1-208ENST00000595726 PUS10Q3MIT2 529 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-208ENST00000595726 BRDTQ58F21 947 aaPredicted RBP16.31■□□□□ 0.2
SHKBP1-208ENST00000595726 PRSS33Q8NF86 280 aa16.31■□□□□ 0.2
SHKBP1-208ENST00000595726 NEDD1Q8NHV4 660 aa16.31■□□□□ 0.2
SHKBP1-208ENST00000595726 OSBP2Q969R2 916 aa16.31■□□□□ 0.2
SHKBP1-208ENST00000595726 MRPL38Q96DV4 380 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-208ENST00000595726 MFSD14AQ96MC6 490 aa16.31■□□□□ 0.2
SHKBP1-208ENST00000595726 ADD3Q9UEY8 706 aaKnown RBP16.31■□□□□ 0.2
SHKBP1-208ENST00000595726 LCTP09848 1927 aa16.31■□□□□ 0.2
SHKBP1-208ENST00000595726 SPTBN4Q9H254 2564 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 ABHD14A-ACY1A0A1B0GW23 586 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 KPNA6O60684 536 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 CXCL10P02778 98 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 TSPY3P0CV98 308 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 TSPY8P0CW00 308 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 CKBP12277 381 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 CALML3P27482 149 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 TDO2P48775 406 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 PPP2R5BQ15173 497 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 TCEAL5Q5H9L2 206 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 RCSD1Q6JBY9 416 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 ZSCAN25Q6NSZ9 544 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 GIMAP6Q6P9H5 292 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 SLC30A10Q6XR72 485 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 CAGE1Q8TC20 777 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 MUTYHQ9UIF7 546 aa16.3■□□□□ 0.2
SHKBP1-208ENST00000595726 PTPDC1A2A3K4 754 aa16.29■□□□□ 0.2
SHKBP1-208ENST00000595726 ARIH2O95376 493 aa16.29■□□□□ 0.2
SHKBP1-208ENST00000595726 APPP05067 770 aa16.29■□□□□ 0.2
SHKBP1-208ENST00000595726 TXNP10599 105 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-208ENST00000595726 SLC16A2P36021 539 aa16.29■□□□□ 0.2
SHKBP1-208ENST00000595726 IKBKEQ14164 716 aa16.29■□□□□ 0.2
SHKBP1-208ENST00000595726 TTBK2Q6IQ55 1244 aa16.29■□□□□ 0.2
SHKBP1-208ENST00000595726 ADHFE1Q8IWW8 467 aa16.29■□□□□ 0.2
SHKBP1-208ENST00000595726 SIRT2Q8IXJ6 389 aa16.29■□□□□ 0.2
SHKBP1-208ENST00000595726 CCDC155Q8N6L0 562 aa16.29■□□□□ 0.2
SHKBP1-208ENST00000595726 BANK1Q8NDB2 785 aa16.29■□□□□ 0.2
SHKBP1-208ENST00000595726 YTHDC1Q96MU7 727 aaKnown RBP16.29■□□□□ 0.2
SHKBP1-208ENST00000595726 RAD50Q92878 1312 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 MYO15AQ9UKN7 3530 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 NMT2O60551 498 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 PLA2G6O60733 806 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 ICAM1P05362 532 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 PDE4DQ08499 809 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 MBTPS1Q14703 1052 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 CLUL1Q15846 466 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 EPC2Q52LR7 807 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 AFG1LQ8WV93 481 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 PABPC5Q96DU9 382 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 CHMP4BQ9H444 224 aaKnown RBP16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 ZNF287Q9HBT7 754 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 INCENPQ9NQS7 918 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 INSL6Q9Y581 213 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 ZDBF2Q9HCK1 2354 aa16.28■□□□□ 0.2
SHKBP1-208ENST00000595726 NKRFO15226 690 aaKnown RBP eCLIP16.27■□□□□ 0.2
SHKBP1-208ENST00000595726 ST18O60284 1047 aa16.27■□□□□ 0.2
SHKBP1-208ENST00000595726 PDE4BQ07343 736 aa16.27■□□□□ 0.2
SHKBP1-208ENST00000595726 TRAF7Q6Q0C0 670 aa16.27■□□□□ 0.2
SHKBP1-208ENST00000595726 SCFD2Q8WU76 684 aa16.27■□□□□ 0.2
SHKBP1-208ENST00000595726 KAT2BQ92831 832 aa16.27■□□□□ 0.2
SHKBP1-208ENST00000595726 WNT8BQ93098 351 aa16.27■□□□□ 0.2
SHKBP1-208ENST00000595726 UPF3BQ9BZI7 483 aaKnown RBP16.27■□□□□ 0.2
SHKBP1-208ENST00000595726 CLDND1Q9NY35 253 aa16.27■□□□□ 0.2
SHKBP1-208ENST00000595726 PRKAG3Q9UGI9 489 aa16.27■□□□□ 0.2
SHKBP1-208ENST00000595726 CTNNA3Q9UI47 895 aa16.27■□□□□ 0.2
SHKBP1-208ENST00000595726 STX8Q9UNK0 236 aa16.27■□□□□ 0.2
SHKBP1-208ENST00000595726 MYO7AQ13402 2215 aa16.27■□□□□ 0.19
SHKBP1-208ENST00000595726 CACNA1AO00555 2505 aa16.26■□□□□ 0.19
SHKBP1-208ENST00000595726 SIP14410 1827 aa16.26■□□□□ 0.19
SHKBP1-208ENST00000595726 GPAA1O43292 621 aa16.26■□□□□ 0.19
SHKBP1-208ENST00000595726 LTBRP36941 435 aa16.26■□□□□ 0.19
SHKBP1-208ENST00000595726 ZNF200P98182 395 aaPredicted RBP16.26■□□□□ 0.19
SHKBP1-208ENST00000595726 GPM6BQ13491 265 aa16.26■□□□□ 0.19
SHKBP1-208ENST00000595726 PTPROQ16827 1216 aa16.26■□□□□ 0.19
SHKBP1-208ENST00000595726 ZNF618Q5T7W0 954 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms