RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 GAS2L1Q99501 681 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-212ENST00000591126 ZMYND15Q9H091 742 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 SUGCTQ9HAC7 445 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 SLC38A7Q9NVC3 462 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 MKRN1Q9UHC7 482 aaKnown RBP6.97□□□□□ -1.29
SMAD4-212ENST00000591126 COMMD10Q9Y6G5 202 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 SLIT3O75094 1523 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 OR52Z1P0C646 297 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 LONP1P36776 959 aaKnown RBP6.97□□□□□ -1.29
SMAD4-212ENST00000591126 PDE6CP51160 858 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 PPP2R5DQ14738 602 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 PRR16Q569H4 304 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 TRMT1LQ7Z2T5 733 aaKnown RBP6.97□□□□□ -1.29
SMAD4-212ENST00000591126 SHCBP1Q8NEM2 672 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 ENGASEQ8NFI3 743 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 NAA15Q9BXJ9 866 aaKnown RBP6.97□□□□□ -1.29
SMAD4-212ENST00000591126 OSBPL3Q9H4L5 887 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 PARP2Q9UGN5 583 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 SEPT9Q9UHD8 586 aaPredicted RBP6.97□□□□□ -1.29
SMAD4-212ENST00000591126 KNDC1Q76NI1 1749 aa6.97□□□□□ -1.29
SMAD4-212ENST00000591126 UBE2Q2LH0YL09 131 aa6.96□□□□□ -1.29
SMAD4-212ENST00000591126 AMHP03971 560 aa6.96□□□□□ -1.29
SMAD4-212ENST00000591126 CCDC175P0C221 793 aa6.96□□□□□ -1.29
SMAD4-212ENST00000591126 TNNC1P63316 161 aa6.96□□□□□ -1.29
SMAD4-212ENST00000591126 MRPS9P82933 396 aaKnown RBP6.96□□□□□ -1.29
SMAD4-212ENST00000591126 TSPY1Q01534 308 aa6.96□□□□□ -1.29
SMAD4-212ENST00000591126 ELAVL2Q12926 359 aaKnown RBP6.96□□□□□ -1.29
SMAD4-212ENST00000591126 FAM102BQ5T8I3 360 aa6.96□□□□□ -1.29
SMAD4-212ENST00000591126 TPH2Q8IWU9 490 aa6.96□□□□□ -1.29
SMAD4-212ENST00000591126 TNS4Q8IZW8 715 aa6.96□□□□□ -1.29
SMAD4-212ENST00000591126 EFHBQ8N7U6 833 aa6.96□□□□□ -1.29
SMAD4-212ENST00000591126 SECISBP2LQ93073 1101 aaKnown RBP6.96□□□□□ -1.29
SMAD4-212ENST00000591126 CAPNS2Q96L46 248 aa6.96□□□□□ -1.29
SMAD4-212ENST00000591126 PUS3Q9BZE2 481 aaKnown RBP6.96□□□□□ -1.29
SMAD4-212ENST00000591126 PCDHA4Q9UN74 947 aa6.96□□□□□ -1.29
SMAD4-212ENST00000591126 ROBO1Q9Y6N7 1651 aa6.96□□□□□ -1.29
SMAD4-212ENST00000591126 SLU7O95391 586 aaKnown RBP6.96□□□□□ -1.3
SMAD4-212ENST00000591126 RAG1P15918 1043 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 TXKP42681 527 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 LMAN1P49257 510 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 BACE1P56817 501 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 MTERF2Q49AM1 385 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 CCDC183Q5T5S1 534 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 PIK3AP1Q6ZUJ8 805 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 PLCD3Q8N3E9 789 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 KLHDC4Q8TBB5 520 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 SDR42E1Q8WUS8 393 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 OPTNQ96CV9 577 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 SNX25Q9H3E2 840 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 VTA1Q9NP79 307 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 STK17AQ9UEE5 414 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 NRBP1Q9UHY1 535 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 GOLGA6L10A0A0M3HER8 536 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 CYP2B6P20813 491 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 MCAMP43121 646 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 TDRD12Q587J7 1177 aaKnown RBP6.96□□□□□ -1.3
SMAD4-212ENST00000591126 FAM83BQ5T0W9 1011 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 ADALQ6DHV7 355 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.96□□□□□ -1.3
SMAD4-212ENST00000591126 MED10Q9BTT4 135 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 STARD7Q9NQZ5 370 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 ELP1O95163 1332 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 F5H6K3 240 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 PRPF3O43395 683 aaKnown RBP6.96□□□□□ -1.3
SMAD4-212ENST00000591126 OATP04181 439 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 C6orf222P0C671 652 aaPredicted RBP6.96□□□□□ -1.3
SMAD4-212ENST00000591126 BRD2P25440 801 aaKnown RBP6.96□□□□□ -1.3
SMAD4-212ENST00000591126 CYLC1P35663 651 aaPredicted RBP6.96□□□□□ -1.3
SMAD4-212ENST00000591126 CAP2P40123 477 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 RASSF7Q02833 373 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 KLRC3Q07444 240 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 DGKZQ13574 1117 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 MTMR2Q13614 643 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 DIXDC1Q155Q3 683 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 DIS3L2Q8IYB7 885 aaKnown RBP6.96□□□□□ -1.3
SMAD4-212ENST00000591126 SH3RF3Q8TEJ3 882 aaPredicted RBP6.96□□□□□ -1.3
SMAD4-212ENST00000591126 PSPC1Q8WXF1 523 aaKnown RBP6.96□□□□□ -1.3
SMAD4-212ENST00000591126 USP26Q9BXU7 913 aa6.96□□□□□ -1.3
SMAD4-212ENST00000591126 TAF1DQ9H5J8 278 aaPredicted RBP6.96□□□□□ -1.3
SMAD4-212ENST00000591126 PNMA6EA0A0J9YXQ4 647 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 ATP2A1O14983 1001 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 GPR182O15218 404 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 TXNP10599 105 aaKnown RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 RFC5P40937 340 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 GSDMDP57764 484 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 APOBRQ0VD83 1088 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 TRIM14Q14142 442 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 NFKBIBQ15653 356 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 ARHGAP15Q53QZ3 475 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 CDC42EP5Q6NZY7 148 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 CTU1Q7Z7A3 348 aaKnown RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 CABP7Q86V35 215 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 SMAP1Q8IYB5 467 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-212ENST00000591126 DNERQ8NFT8 737 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 SPATA33Q96N06 139 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 ACCSQ96QU6 501 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 ATP6V0A4Q9HBG4 840 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 TBC1D7Q9P0N9 293 aa6.95□□□□□ -1.3
SMAD4-212ENST00000591126 GOLGA6L10A6NI86 522 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms