RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 AP5M1Q9H0R1 490 aa18.95■□□□□ 0.62
DNMT1-221ENST00000589538 PXMP2Q9NR77 195 aa18.95■□□□□ 0.62
DNMT1-221ENST00000589538 PHF24Q9UPV7 400 aa18.95■□□□□ 0.62
DNMT1-221ENST00000589538 hCG_1984214I3L0E3 225 aa18.94■□□□□ 0.62
DNMT1-221ENST00000589538 NKRFO15226 690 aaKnown RBP eCLIP18.94■□□□□ 0.62
DNMT1-221ENST00000589538 C6orf222P0C671 652 aaPredicted RBP18.94■□□□□ 0.62
DNMT1-221ENST00000589538 ADCYAP1R1P41586 468 aa18.94■□□□□ 0.62
DNMT1-221ENST00000589538 ZNF713Q8N859 430 aaPredicted RBP18.94■□□□□ 0.62
DNMT1-221ENST00000589538 KLHDC9Q8NEP7 349 aa18.94■□□□□ 0.62
DNMT1-221ENST00000589538 LENG1Q96BZ8 264 aaPredicted RBP18.94■□□□□ 0.62
DNMT1-221ENST00000589538 WDR11Q9BZH6 1224 aa18.94■□□□□ 0.62
DNMT1-221ENST00000589538 COL20A1Q9P218 1284 aa18.94■□□□□ 0.62
DNMT1-221ENST00000589538 RBM27Q9P2N5 1060 aaKnown RBP18.94■□□□□ 0.62
DNMT1-221ENST00000589538 GNEQ9Y223 722 aaKnown RBP18.94■□□□□ 0.62
DNMT1-221ENST00000589538 CNTNAP5Q8WYK1 1306 aa18.94■□□□□ 0.62
DNMT1-221ENST00000589538 PIK3CDO00329 1044 aa18.93■□□□□ 0.62
DNMT1-221ENST00000589538 ZEB2O60315 1214 aa18.93■□□□□ 0.62
DNMT1-221ENST00000589538 DUSP28Q4G0W2 176 aa18.93■□□□□ 0.62
DNMT1-221ENST00000589538 TLK2Q86UE8 772 aa18.93■□□□□ 0.62
DNMT1-221ENST00000589538 PDGFCQ9NRA1 345 aa18.93■□□□□ 0.62
DNMT1-221ENST00000589538 DDX49Q9Y6V7 483 aaKnown RBP18.93■□□□□ 0.62
DNMT1-221ENST00000589538 ALPK3Q96L96 1907 aa18.93■□□□□ 0.62
DNMT1-221ENST00000589538 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.92■□□□□ 0.62
DNMT1-221ENST00000589538 ADCY6O43306 1168 aa18.92■□□□□ 0.62
DNMT1-221ENST00000589538 EIF3JO75822 258 aaKnown RBP18.92■□□□□ 0.62
DNMT1-221ENST00000589538 NR3C2P08235 984 aa18.92■□□□□ 0.62
DNMT1-221ENST00000589538 SMPD1P17405 629 aa18.92■□□□□ 0.62
DNMT1-221ENST00000589538 EIF2AK2P19525 551 aaKnown RBP18.92■□□□□ 0.62
DNMT1-221ENST00000589538 HOXA13P31271 388 aaPredicted RBP18.92■□□□□ 0.62
DNMT1-221ENST00000589538 FUT2Q10981 343 aa18.92■□□□□ 0.62
DNMT1-221ENST00000589538 TTLL4Q14679 1199 aa18.92■□□□□ 0.62
DNMT1-221ENST00000589538 GNASQ5JWF2 1037 aa18.92■□□□□ 0.62
DNMT1-221ENST00000589538 HEATR3Q7Z4Q2 680 aa18.92■□□□□ 0.62
DNMT1-221ENST00000589538 SMARCC2Q8TAQ2 1214 aa18.92■□□□□ 0.62
DNMT1-221ENST00000589538 IL17RAQ96F46 866 aa18.92■□□□□ 0.62
DNMT1-221ENST00000589538 PDCD2LQ9BRP1 358 aa18.92■□□□□ 0.62
DNMT1-221ENST00000589538 UPF3BQ9BZI7 483 aaKnown RBP18.92■□□□□ 0.62
DNMT1-221ENST00000589538 GLT8D2Q9H1C3 349 aa18.92■□□□□ 0.62
DNMT1-221ENST00000589538 PSTPIP2Q9H939 334 aa18.92■□□□□ 0.62
DNMT1-221ENST00000589538 FAM217BQ9NTX9 383 aaPredicted RBP18.92■□□□□ 0.62
DNMT1-221ENST00000589538 PDRG1Q9NUG6 133 aa18.92■□□□□ 0.62
DNMT1-221ENST00000589538 DYNC1LI2O43237 492 aaPredicted RBP18.91■□□□□ 0.62
DNMT1-221ENST00000589538 CDC27P30260 824 aa18.91■□□□□ 0.62
DNMT1-221ENST00000589538 CCND2P30279 289 aa18.91■□□□□ 0.62
DNMT1-221ENST00000589538 ACLYP53396 1101 aa18.91■□□□□ 0.62
DNMT1-221ENST00000589538 KCNA10Q16322 511 aa18.91■□□□□ 0.62
DNMT1-221ENST00000589538 FSCN1Q16658 493 aaKnown RBP18.91■□□□□ 0.62
DNMT1-221ENST00000589538 LRRC26Q2I0M4 334 aa18.91■□□□□ 0.62
DNMT1-221ENST00000589538 BRDTQ58F21 947 aaPredicted RBP18.91■□□□□ 0.62
DNMT1-221ENST00000589538 C1orf53Q5VUE5 145 aa18.91■□□□□ 0.62
DNMT1-221ENST00000589538 PPP1R18Q6NYC8 613 aa18.91■□□□□ 0.62
DNMT1-221ENST00000589538 KCNV1Q6PIU1 500 aa18.91■□□□□ 0.62
DNMT1-221ENST00000589538 SLC39A5Q6ZMH5 540 aa18.91■□□□□ 0.62
DNMT1-221ENST00000589538 FCHSD1Q86WN1 690 aa18.91■□□□□ 0.62
DNMT1-221ENST00000589538 ZNF274Q96GC6 653 aaPredicted RBP18.91■□□□□ 0.62
DNMT1-221ENST00000589538 V9GY48 417 aaPredicted RBP18.91■□□□□ 0.62
DNMT1-221ENST00000589538 KIAA1217Q5T5P2 1943 aa18.9■□□□□ 0.62
DNMT1-221ENST00000589538 A0A1W2PQ45 241 aaPredicted RBP18.9■□□□□ 0.62
DNMT1-221ENST00000589538 A0A1W2PQY0 241 aa18.9■□□□□ 0.62
DNMT1-221ENST00000589538 STAM2O75886 525 aa18.9■□□□□ 0.62
DNMT1-221ENST00000589538 CABYRO75952 493 aa18.9■□□□□ 0.62
DNMT1-221ENST00000589538 PDIA3P30101 505 aaKnown RBP18.9■□□□□ 0.62
DNMT1-221ENST00000589538 ADD1P35611 737 aaKnown RBP18.9■□□□□ 0.62
DNMT1-221ENST00000589538 TOB2Q14106 344 aaPredicted RBP18.9■□□□□ 0.62
DNMT1-221ENST00000589538 ANKRD1Q15327 319 aa18.9■□□□□ 0.62
DNMT1-221ENST00000589538 CCSAPQ6IQ19 270 aaPredicted RBP18.9■□□□□ 0.62
DNMT1-221ENST00000589538 C7orf61Q8IZ16 206 aa18.9■□□□□ 0.62
DNMT1-221ENST00000589538 GLT1D1Q96MS3 346 aa18.9■□□□□ 0.62
DNMT1-221ENST00000589538 ALDH8A1Q9H2A2 487 aaPredicted RBP18.9■□□□□ 0.62
DNMT1-221ENST00000589538 ELP1O95163 1332 aa18.9■□□□□ 0.62
DNMT1-221ENST00000589538 hCG_1642624A0A1W2PR95 340 aa18.89■□□□□ 0.61
DNMT1-221ENST00000589538 H0YGN5 161 aa18.89■□□□□ 0.61
DNMT1-221ENST00000589538 ASGR1P07306 291 aa18.89■□□□□ 0.61
DNMT1-221ENST00000589538 TXNP10599 105 aaKnown RBP18.89■□□□□ 0.61
DNMT1-221ENST00000589538 CPT1AP50416 773 aa18.89■□□□□ 0.61
DNMT1-221ENST00000589538 ATN1P54259 1190 aaPredicted RBP18.89■□□□□ 0.61
DNMT1-221ENST00000589538 AKAP17AQ02040 695 aaKnown RBP18.89■□□□□ 0.61
DNMT1-221ENST00000589538 SNX17Q15036 470 aa18.89■□□□□ 0.61
DNMT1-221ENST00000589538 PGM5Q15124 567 aa18.89■□□□□ 0.61
DNMT1-221ENST00000589538 XRRA1Q6P2D8 792 aa18.89■□□□□ 0.61
DNMT1-221ENST00000589538 VSIG10LQ86VR7 867 aa18.89■□□□□ 0.61
DNMT1-221ENST00000589538 FERMT2Q96AC1 680 aa18.89■□□□□ 0.61
DNMT1-221ENST00000589538 SEZ6LQ9BYH1 1024 aa18.89■□□□□ 0.61
DNMT1-221ENST00000589538 STARD7Q9NQZ5 370 aa18.89■□□□□ 0.61
DNMT1-221ENST00000589538 FRMPD4Q14CM0 1322 aa18.89■□□□□ 0.61
DNMT1-221ENST00000589538 MEIS2O14770 477 aa18.88■□□□□ 0.61
DNMT1-221ENST00000589538 MYCLP12524 364 aaPredicted RBP18.88■□□□□ 0.61
DNMT1-221ENST00000589538 NAPAP54920 295 aa18.88■□□□□ 0.61
DNMT1-221ENST00000589538 RTP1P59025 263 aa18.88■□□□□ 0.61
DNMT1-221ENST00000589538 PFKFB3Q16875 520 aaPredicted RBP18.88■□□□□ 0.61
DNMT1-221ENST00000589538 WWC2Q6AWC2 1192 aa18.88■□□□□ 0.61
DNMT1-221ENST00000589538 CPLX2Q6PUV4 134 aaKnown RBP18.88■□□□□ 0.61
DNMT1-221ENST00000589538 SEPT14Q6ZU15 432 aa18.88■□□□□ 0.61
DNMT1-221ENST00000589538 OR6J1Q8NGC5 347 aa18.88■□□□□ 0.61
DNMT1-221ENST00000589538 EHMT1Q9H9B1 1298 aa18.88■□□□□ 0.61
DNMT1-221ENST00000589538 BARHL2Q9NY43 387 aa18.88■□□□□ 0.61
DNMT1-221ENST00000589538 MYADML2A6NDP7 307 aa18.87■□□□□ 0.61
DNMT1-221ENST00000589538 CTAGE5O15320 804 aa18.87■□□□□ 0.61
DNMT1-221ENST00000589538 PRPF3O43395 683 aaKnown RBP18.87■□□□□ 0.61
DNMT1-221ENST00000589538 SCG2P13521 617 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms