RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.9□□□□□ -0.34
SMAD4-205ENST00000588745 DCAF8L1A6NGE4 600 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 ATP2A1O14983 1001 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 XRCC6P12956 609 aaKnown RBP eCLIP12.9□□□□□ -0.34
SMAD4-205ENST00000588745 CIITAP33076 1130 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 TXKP42681 527 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 FXR2P51116 673 aaKnown RBP eCLIP12.9□□□□□ -0.34
SMAD4-205ENST00000588745 FKBP1BP68106 108 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 E2F4Q16254 413 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 STX1AQ16623 288 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 Q4G0T1 1027 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 SNRNP48Q6IEG0 339 aaKnown RBP12.9□□□□□ -0.34
SMAD4-205ENST00000588745 KANK3Q6NY19 840 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 GADL1Q6ZQY3 521 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 SAMD3Q8N6K7 520 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 IGSF22Q8N9C0 903 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 CCDC34Q96HJ3 373 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 PANK2Q9BZ23 570 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 ZNF408Q9H9D4 720 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 KCNMB3Q9NPA1 279 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 RNF146Q9NTX7 359 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 HOXC10Q9NYD6 342 aa12.9□□□□□ -0.34
SMAD4-205ENST00000588745 MAP3K20Q9NYL2 800 aaKnown RBP12.9□□□□□ -0.34
SMAD4-205ENST00000588745 HOOK1Q9UJC3 728 aaKnown RBP12.9□□□□□ -0.34
SMAD4-205ENST00000588745 ZNF214Q9UL59 606 aaPredicted RBP12.9□□□□□ -0.34
SMAD4-205ENST00000588745 PP2D1A8MPX8 630 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 SLFN14P0C7P3 912 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 HOXA7P31268 230 aaPredicted RBP12.89□□□□□ -0.35
SMAD4-205ENST00000588745 UBA7P41226 1012 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 FMR1Q06787 632 aaKnown RBP eCLIP12.89□□□□□ -0.35
SMAD4-205ENST00000588745 PNOCQ13519 176 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 POSTNQ15063 836 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 TKFCQ3LXA3 575 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 MUM1L1Q5H9M0 696 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 CEP57L1Q8IYX8 460 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 IQUBQ8NA54 791 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 RNF214Q8ND24 703 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 HAS1Q92839 578 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 ERCC4Q92889 916 aaPredicted RBP12.89□□□□□ -0.35
SMAD4-205ENST00000588745 TRERF1Q96PN7 1200 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 TEX13BQ9BXU2 312 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 RAB34Q9BZG1 259 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 CCSER1Q9C0I3 900 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 NMRK2Q9NPI5 230 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 HOMER2Q9NSB8 354 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 TUBE1Q9UJT0 475 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 RABGAP1Q9Y3P9 1069 aa12.89□□□□□ -0.35
SMAD4-205ENST00000588745 FRMPD4Q14CM0 1322 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 RPTORQ8N122 1335 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 FAM86B1E9PN63 330 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 TBX3O15119 743 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 MARCH6O60337 910 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 FAM86B2P0C5J1 330 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 CDC25AP30304 524 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 TECP42680 631 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 TMEM132BQ14DG7 1078 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 KARSQ15046 597 aaKnown RBP12.88□□□□□ -0.35
SMAD4-205ENST00000588745 ANO6Q4KMQ2 910 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 PRR16Q569H4 304 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 SLC30A10Q6XR72 485 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 SH3RF1Q7Z6J0 888 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 CABP7Q86V35 215 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 FAM200AQ8TCP9 573 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 SYTL5Q8TDW5 730 aaPredicted RBP12.88□□□□□ -0.35
SMAD4-205ENST00000588745 LENG9Q96B70 501 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 GBA2Q9HCG7 927 aaPredicted RBP12.88□□□□□ -0.35
SMAD4-205ENST00000588745 DISC1Q9NRI5 854 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 ANO10Q9NW15 660 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 CCDC39Q9UFE4 941 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 AGTPBP1Q9UPW5 1226 aa12.88□□□□□ -0.35
SMAD4-205ENST00000588745 FOXN1O15353 648 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 CAVIN2O95810 425 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 GJA5P36382 358 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 ZNF76P36508 570 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 STAT6P42226 847 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 RPS6P62753 249 aaKnown RBP12.87□□□□□ -0.35
SMAD4-205ENST00000588745 IRX3P78415 501 aaPredicted RBP12.87□□□□□ -0.35
SMAD4-205ENST00000588745 MDM2Q00987 491 aaPredicted RBP12.87□□□□□ -0.35
SMAD4-205ENST00000588745 MOGSQ13724 837 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 PDIA5Q14554 519 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 ZRSR1Q15695 479 aaKnown RBP12.87□□□□□ -0.35
SMAD4-205ENST00000588745 PDXDC2PQ6P474 469 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 LBX2Q6XYB7 198 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 RNF207Q6ZRF8 634 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 FASTKD5Q7L8L6 764 aaKnown RBP12.87□□□□□ -0.35
SMAD4-205ENST00000588745 SLFN12Q8IYM2 578 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 MB21D1Q8N884 522 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 RASSF8Q8NHQ8 419 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 ETNPPLQ8TBG4 499 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 DNAJC25Q9H1X3 360 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 TTC12Q9H892 705 aaPredicted RBP12.87□□□□□ -0.35
SMAD4-205ENST00000588745 COL20A1Q9P218 1284 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 LRWD1Q9UFC0 647 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 RIPK3Q9Y572 518 aa12.87□□□□□ -0.35
SMAD4-205ENST00000588745 IGLV3-22A0A075B6J6 115 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 POTEMA6NI47 508 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 CELF2O95319 508 aaKnown RBP12.86□□□□□ -0.35
SMAD4-205ENST00000588745 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 STAT3P40763 770 aa12.86□□□□□ -0.35
SMAD4-205ENST00000588745 UBXN2AP68543 259 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms