RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 HOXA13P31271 388 aaPredicted RBP11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 ZNF76P36508 570 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 TXLNAP40222 546 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 CCNA1P78396 465 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 TMEM266Q2M3C6 531 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 Q4G0T1 1027 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 CCDC183Q5T5S1 534 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 RESP18Q5W5W9 173 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 CAVIN1Q6NZI2 390 aaKnown RBP11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 SLFN12Q8IYM2 578 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 C4orf32Q8N8J7 132 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 FSIP1Q8NA03 581 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 CRYGNQ8WXF5 182 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 SPATC1LQ9H0A9 340 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 HOMER2Q9NSB8 354 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 STK24Q9Y6E0 443 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 PDHXO00330 501 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 KINO60870 393 aaKnown RBP11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 PDIA5Q14554 519 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 CALCRLQ16602 461 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 SMCR8Q8TEV9 937 aaPredicted RBP11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 MBOAT7Q96N66 472 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 PARK7Q99497 189 aaKnown RBP11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 MROH8Q9H579 483 aa11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 HOOK1Q9UJC3 728 aaKnown RBP11.98□□□□□ -0.49
NEDD4L-224ENST00000588712 NFIBO00712 420 aa11.97□□□□□ -0.49
NEDD4L-224ENST00000588712 RPS6P62753 249 aaKnown RBP11.97□□□□□ -0.49
NEDD4L-224ENST00000588712 MUM1L1Q5H9M0 696 aa11.97□□□□□ -0.49
NEDD4L-224ENST00000588712 NSMFQ6X4W1 530 aa11.97□□□□□ -0.49
NEDD4L-224ENST00000588712 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.97□□□□□ -0.49
NEDD4L-224ENST00000588712 SHCBP1Q8NEM2 672 aa11.97□□□□□ -0.49
NEDD4L-224ENST00000588712 SYTL5Q8TDW5 730 aaPredicted RBP11.97□□□□□ -0.49
NEDD4L-224ENST00000588712 FAM20AQ96MK3 541 aa11.97□□□□□ -0.49
NEDD4L-224ENST00000588712 TIGD1Q96MW7 591 aa11.97□□□□□ -0.49
NEDD4L-224ENST00000588712 MPHOSPH6Q99547 160 aaKnown RBP11.97□□□□□ -0.49
NEDD4L-224ENST00000588712 USP25Q9UHP3 1055 aa11.97□□□□□ -0.49
NEDD4L-224ENST00000588712 VWA3AA6NCI4 1184 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 BTBD19C9JJ37 291 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 SYKP43405 635 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 SETQ01105 290 aaPredicted RBP11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 SREBF2Q12772 1141 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 KANK3Q6NY19 840 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 NIPA1Q7RTP0 329 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 RASAL3Q86YV0 1011 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 ELOA2Q8IYF1 753 aaPredicted RBP11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 REM2Q8IYK8 340 aaPredicted RBP11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 GPRC5AQ8NFJ5 357 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 NSUN6Q8TEA1 469 aaKnown RBP11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 BRI3BPQ8WY22 251 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 TBC1D5Q92609 795 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 MTMR9Q96QG7 549 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 CSRNP2Q9H175 543 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 DACT1Q9NYF0 836 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 KCNH3Q9ULD8 1083 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 ABT1Q9ULW3 272 aaKnown RBP11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 RIPK3Q9Y572 518 aa11.96□□□□□ -0.49
NEDD4L-224ENST00000588712 A0A0G2JMZ2 1700 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 SLC26A4O43511 780 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 STAM2O75886 525 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 SLC10A3P09131 477 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 PFKFB1P16118 471 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 TPRNQ4KMQ1 711 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 PCNX4Q63HM2 1172 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 SHC4Q6S5L8 630 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 FMR1NBQ8N0W7 255 aaPredicted RBP11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 ANKRD35Q8N283 1001 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 ENGASEQ8NFI3 743 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 DNERQ8NFT8 737 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 NUP62CLQ9H1M0 184 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 BTBD7Q9P203 1132 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 RBPJLQ9UBG7 517 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 HPSEQ9Y251 543 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 RPTORQ8N122 1335 aa11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 COL11A1P12107 1806 aaPredicted RBP11.96□□□□□ -0.5
NEDD4L-224ENST00000588712 A0A1B0GVL5 298 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 WNT7AO00755 349 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 MAFGO15525 162 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 TDP2O95551 362 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 LIG1P18858 919 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 BAATQ14032 418 aaPredicted RBP11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 CEP55Q53EZ4 464 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 ARHGEF16Q5VV41 709 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 NCAPG2Q86XI2 1143 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 CLIC6Q96NY7 704 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 IWS1Q96ST2 819 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 RMDN3Q96TC7 470 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 PAGR1Q9BTK6 254 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 TNMDQ9H2S6 317 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 CYP39A1Q9NYL5 469 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 ADD3Q9UEY8 706 aaKnown RBP11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 CCDC39Q9UFE4 941 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 PCDHA12Q9UN75 941 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 FRMPD4Q14CM0 1322 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 SMCHD1A6NHR9 2005 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 LOC102724159A0A0B4J2E5 919 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 NR1I2O75469 434 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 ZNF202O95125 648 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 BCRP11274 1271 aa11.95□□□□□ -0.5
NEDD4L-224ENST00000588712 UBA7P41226 1012 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms