RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 ZNF574Q6ZN55 896 aaPredicted RBP7.07□□□□□ -1.28
SMAD4-203ENST00000585448 RUFY4Q6ZNE9 571 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 ERC1Q8IUD2 1116 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 EFCAB13Q8IY85 973 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 FAM169BQ8N8A8 192 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 DAGLBQ8NCG7 672 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 DNAAF4Q8WXU2 420 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 UBE2FQ969M7 185 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 EXOC4Q96A65 974 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 MIEF2Q96C03 454 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 ERO1AQ96HE7 468 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 HDAC8Q9BY41 377 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 TSPY26PQ9H489 355 aa7.07□□□□□ -1.28
SMAD4-203ENST00000585448 CPSF2Q9P2I0 782 aaKnown RBP7.07□□□□□ -1.28
SMAD4-203ENST00000585448 LTBP3Q9NS15 1303 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 KINO60870 393 aaKnown RBP7.06□□□□□ -1.28
SMAD4-203ENST00000585448 SSBP05455 408 aaKnown RBP eCLIP7.06□□□□□ -1.28
SMAD4-203ENST00000585448 NMIQ13287 307 aaPredicted RBP7.06□□□□□ -1.28
SMAD4-203ENST00000585448 AUHQ13825 339 aaKnown RBP7.06□□□□□ -1.28
SMAD4-203ENST00000585448 CRYMQ14894 314 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 RBBP5Q15291 538 aaKnown RBP7.06□□□□□ -1.28
SMAD4-203ENST00000585448 LEKR1Q6ZMV7 388 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 CCDC186Q7Z3E2 898 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 MORC1Q86VD1 984 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 TP53INP2Q8IXH6 220 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 TEX11Q8IYF3 940 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 PMFBP1Q8TBY8 1022 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 UTP14AQ9BVJ6 771 aaKnown RBP7.06□□□□□ -1.28
SMAD4-203ENST00000585448 ASCC2Q9H1I8 757 aaPredicted RBP7.06□□□□□ -1.28
SMAD4-203ENST00000585448 VEZTQ9HBM0 779 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 ATP13A1Q9HD20 1204 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 PRKAG3Q9UGI9 489 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 USP25Q9UHP3 1055 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 PCDHB12Q9Y5F1 795 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 OAS3Q9Y6K5 1087 aaKnown RBP7.06□□□□□ -1.28
SMAD4-203ENST00000585448 RTEL1-TNFRSF6BF6WH68 1400 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 UACAQ9BZF9 1416 aa7.06□□□□□ -1.28
SMAD4-203ENST00000585448 SPAG9O60271 1321 aaKnown RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 MYBBP1AQ9BQG0 1328 aaKnown RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 KIF27Q86VH2 1401 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 A0A087WUV0 522 aaPredicted RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 C9IYK1 514 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 PES1O00541 588 aaKnown RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 SHOXO15266 292 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 SIGLEC6O43699 453 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 ESR1P03372 595 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 SCP2P22307 547 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 POLD1P28340 1107 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 TPP2P29144 1249 aaPredicted RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 RDXP35241 583 aaKnown RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 PRPHP41219 470 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 CORO7P57737 925 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 IKZF1Q13422 519 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 HSP90B2PQ58FF3 399 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 SPTY2D1Q68D10 685 aaPredicted RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 DDX46Q7L014 1031 aaKnown RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 PPFIBP1Q86W92 1011 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 C7orf61Q8IZ16 206 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 RPUSD2Q8IZ73 545 aaKnown RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 ABI1Q8IZP0 508 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 ZNF655Q8N720 491 aaPredicted RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 ARMC5Q96C12 935 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 MKRN2Q9H000 416 aaKnown RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 SPATS2LQ9NUQ6 558 aaKnown RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 GNL3LQ9NVN8 582 aaKnown RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 ARGLU1Q9NWB6 273 aaPredicted RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 IRAK4Q9NWZ3 460 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 CHCHD3Q9NX63 227 aaKnown RBP7.05□□□□□ -1.28
SMAD4-203ENST00000585448 ZSWIM5Q9P217 1185 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 ADGRE2Q9UHX3 823 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 ZNF281Q9Y2X9 895 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 MTUS2Q5JR59 1369 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 KIF15Q9NS87 1388 aa7.05□□□□□ -1.28
SMAD4-203ENST00000585448 PTPRCP08575 1304 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 IL16Q14005 1332 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 KIF7Q2M1P5 1343 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 SHISA3A0PJX4 238 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 PLIN1O60240 522 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 GCFC2P16383 781 aaKnown RBP7.04□□□□□ -1.28
SMAD4-203ENST00000585448 DNAJA1P31689 397 aaKnown RBP7.04□□□□□ -1.28
SMAD4-203ENST00000585448 ACTN2P35609 894 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 INHBEP58166 350 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 RBM6P78332 1123 aaKnown RBP7.04□□□□□ -1.28
SMAD4-203ENST00000585448 ZP2Q05996 745 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 GRIK3Q13003 919 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 NEDD9Q14511 834 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 CCDC26Q8TAB7 109 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 GPT2Q8TD30 523 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 CCDC120Q96HB5 630 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 FAXDC2Q96IV6 333 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 PRDM14Q9GZV8 571 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 RANBP17Q9H2T7 1088 aaKnown RBP7.04□□□□□ -1.28
SMAD4-203ENST00000585448 ZSCAN16Q9H4T2 348 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-203ENST00000585448 LMBRD1Q9NUN5 540 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 ANKRD36BQ8N2N9 1353 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 ANKRD30AQ9BXX3 1397 aa7.04□□□□□ -1.28
SMAD4-203ENST00000585448 A0A087WZG4 1122 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 GOLGA6CA6NDK9 693 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 GOLGA6BA6NDN3 693 aa7.03□□□□□ -1.28
SMAD4-203ENST00000585448 EIF3CLB5ME19 914 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms