RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 STARD7Q9NQZ5 370 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 PDGFCQ9NRA1 345 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 PPP4R2Q9NY27 417 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 PRKAG2Q9UGJ0 569 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 ATP11BQ9Y2G3 1177 aa11.48□□□□□ -0.57
SKA2-208ENST00000583927 TRIP12Q14669 1992 aaPredicted RBP11.48□□□□□ -0.57
SKA2-208ENST00000583927 COL6A3P12111 3177 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 DOCK5Q9H7D0 1870 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 A0A0U1RQG5 324 aaPredicted RBP11.47□□□□□ -0.57
SKA2-208ENST00000583927 CCDC69A6NI79 296 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 KIAA0355O15063 1070 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 REC8O95072 547 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 MYCNP04198 464 aaPredicted RBP11.47□□□□□ -0.57
SKA2-208ENST00000583927 SYN1P17600 705 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 RCAN1P53805 252 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 TLE2Q04725 743 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 COL9A3Q14050 684 aaPredicted RBP11.47□□□□□ -0.57
SKA2-208ENST00000583927 FSCN1Q16658 493 aaKnown RBP11.47□□□□□ -0.57
SKA2-208ENST00000583927 DHX32Q7L7V1 743 aaKnown RBP11.47□□□□□ -0.57
SKA2-208ENST00000583927 TEX2Q8IWB9 1127 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 RASEFQ8IZ41 740 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 TBC1D5Q92609 795 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 TAAR1Q96RJ0 339 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 PIGSQ96S52 555 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 RMDN3Q96TC7 470 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 PDLIM7Q9NR12 457 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 COL20A1Q9P218 1284 aa11.47□□□□□ -0.57
SKA2-208ENST00000583927 FRMPD4Q14CM0 1322 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 DCDC2CA8MYV0 355 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 ARVCFO00192 962 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 DYNC1LI2O43237 492 aaPredicted RBP11.46□□□□□ -0.57
SKA2-208ENST00000583927 EIF3JO75822 258 aaKnown RBP11.46□□□□□ -0.57
SKA2-208ENST00000583927 CFBP00751 764 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 CLTBP09497 229 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 HSPA4P34932 840 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 CPT1AP50416 773 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 TTLL4Q14679 1199 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 PPP2R5BQ15173 497 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 STXBP2Q15833 593 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 LRIT3Q3SXY7 679 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 GPR153Q6NV75 609 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 CCDC62Q6P9F0 684 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 EEPD1Q7L9B9 569 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 TDHQ8IZJ6 230 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 FANCBQ8NB91 859 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 GPHNQ9NQX3 736 aaPredicted RBP11.46□□□□□ -0.57
SKA2-208ENST00000583927 PXMP2Q9NR77 195 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 SLC12A7Q9Y666 1083 aa11.46□□□□□ -0.57
SKA2-208ENST00000583927 DDX49Q9Y6V7 483 aaKnown RBP11.46□□□□□ -0.57
SKA2-208ENST00000583927 A6NJR5 290 aa11.45□□□□□ -0.58
SKA2-208ENST00000583927 PIK3CDO00329 1044 aa11.45□□□□□ -0.58
SKA2-208ENST00000583927 KPNA6O60684 536 aa11.45□□□□□ -0.58
SKA2-208ENST00000583927 CENPBP07199 599 aaPredicted RBP11.45□□□□□ -0.58
SKA2-208ENST00000583927 NR3C2P08235 984 aa11.45□□□□□ -0.58
SKA2-208ENST00000583927 IRX5P78411 483 aaPredicted RBP11.45□□□□□ -0.58
SKA2-208ENST00000583927 FAAP100Q0VG06 881 aa11.45□□□□□ -0.58
SKA2-208ENST00000583927 ADCK5Q3MIX3 580 aa11.45□□□□□ -0.58
SKA2-208ENST00000583927 ARHGEF16Q5VV41 709 aa11.45□□□□□ -0.58
SKA2-208ENST00000583927 APOA5Q6Q788 366 aa11.45□□□□□ -0.58
SKA2-208ENST00000583927 NFXL1Q6ZNB6 911 aa11.45□□□□□ -0.58
SKA2-208ENST00000583927 NOL8Q76FK4 1167 aaKnown RBP11.45□□□□□ -0.58
SKA2-208ENST00000583927 HOMER1Q86YM7 354 aa11.45□□□□□ -0.58
SKA2-208ENST00000583927 SRBD1Q8N5C6 995 aaKnown RBP11.45□□□□□ -0.58
SKA2-208ENST00000583927 EMID1Q96A84 441 aaPredicted RBP11.45□□□□□ -0.58
SKA2-208ENST00000583927 RRP36Q96EU6 259 aaKnown RBP11.45□□□□□ -0.58
SKA2-208ENST00000583927 LBHD1Q9BQE6 289 aaPredicted RBP11.45□□□□□ -0.58
SKA2-208ENST00000583927 PDCD2LQ9BRP1 358 aa11.45□□□□□ -0.58
SKA2-208ENST00000583927 POLR3EQ9NVU0 708 aa11.45□□□□□ -0.58
SKA2-208ENST00000583927 RBM28Q9NW13 759 aaKnown RBP11.45□□□□□ -0.58
SKA2-208ENST00000583927 TBX21Q9UL17 535 aa11.45□□□□□ -0.58
SKA2-208ENST00000583927 NID2Q14112 1375 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 TRIM43BA6NCK2 446 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 GCOM1H8Y6P7 765 aaPredicted RBP11.44□□□□□ -0.58
SKA2-208ENST00000583927 STAM2O75886 525 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 CD4P01730 458 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 POLR2MP0CAP2 368 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 TGFB3P10600 412 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 BEX3Q00994 111 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 BRDTQ58F21 947 aaPredicted RBP11.44□□□□□ -0.58
SKA2-208ENST00000583927 TMEM63BQ5T3F8 832 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 KCNV1Q6PIU1 500 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 SYNE3Q6ZMZ3 975 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 TMTC3Q6ZXV5 915 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 VSIG10LQ86VR7 867 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 FAM126BQ8IXS8 530 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 TRIM43Q96BQ3 446 aaPredicted RBP11.44□□□□□ -0.58
SKA2-208ENST00000583927 MYL10Q9BUA6 226 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 AGXT2Q9BYV1 514 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 UBE2OQ9C0C9 1292 aaKnown RBP11.44□□□□□ -0.58
SKA2-208ENST00000583927 SEC63Q9UGP8 760 aaKnown RBP11.44□□□□□ -0.58
SKA2-208ENST00000583927 CDH23Q9H251 3354 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 TANC1Q9C0D5 1861 aa11.44□□□□□ -0.58
SKA2-208ENST00000583927 WDR81Q562E7 1941 aa11.43□□□□□ -0.58
SKA2-208ENST00000583927 GRIN2DO15399 1336 aa11.43□□□□□ -0.58
SKA2-208ENST00000583927 TLR3O15455 904 aaKnown RBP11.43□□□□□ -0.58
SKA2-208ENST00000583927 PQBP1O60828 265 aaKnown RBP11.43□□□□□ -0.58
SKA2-208ENST00000583927 PLEKHA8P1O95397 391 aa11.43□□□□□ -0.58
SKA2-208ENST00000583927 TXNP10599 105 aaKnown RBP11.43□□□□□ -0.58
SKA2-208ENST00000583927 PURAQ00577 322 aaKnown RBP11.43□□□□□ -0.58
SKA2-208ENST00000583927 MDM2Q00987 491 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms