RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 RFX5P48382 616 aaPredicted RBP13.21□□□□□ -0.3
ERBB2-206ENST00000578373 SMTNP53814 917 aa13.21□□□□□ -0.3
ERBB2-206ENST00000578373 TXNRD1Q16881 649 aa13.21□□□□□ -0.3
ERBB2-206ENST00000578373 ODR4Q5SWX8 454 aa13.21□□□□□ -0.3
ERBB2-206ENST00000578373 FAM196AQ6ZSG2 479 aa13.21□□□□□ -0.3
ERBB2-206ENST00000578373 AGTPBP1Q9UPW5 1226 aa13.21□□□□□ -0.3
ERBB2-206ENST00000578373 PCDHA13Q9Y5I0 950 aa13.21□□□□□ -0.3
ERBB2-206ENST00000578373 CFAP74Q9C0B2 1584 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 TADA3O75528 432 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 PLTPP55058 493 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 VSNL1P62760 191 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 SETDB1Q15047 1291 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 POTEDQ86YR6 584 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 RIN2Q8WYP3 895 aaPredicted RBP13.2□□□□□ -0.3
ERBB2-206ENST00000578373 DNAJC17Q9NVM6 304 aaKnown RBP13.2□□□□□ -0.3
ERBB2-206ENST00000578373 TMEM260Q9NX78 707 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 SALL3Q9BXA9 1300 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 TESPA1A2RU30 521 aaPredicted RBP13.2□□□□□ -0.3
ERBB2-206ENST00000578373 PRPF6O94906 941 aaKnown RBP13.2□□□□□ -0.3
ERBB2-206ENST00000578373 BCRP11274 1271 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 FCER1AP12319 257 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 ENGASEQ8NFI3 743 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 NUCKS1Q9H1E3 243 aaKnown RBP13.2□□□□□ -0.3
ERBB2-206ENST00000578373 DBNDD1Q9H9R9 158 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 ARHGEF10LQ9HCE6 1279 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 CLTAP09496 248 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 ALAS1P13196 640 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 ZSCAN20P17040 1043 aaPredicted RBP13.2□□□□□ -0.3
ERBB2-206ENST00000578373 HOXA13P31271 388 aaPredicted RBP13.2□□□□□ -0.3
ERBB2-206ENST00000578373 DCUN1D2Q6PH85 259 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 FBXO11Q86XK2 927 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 IGDCC4Q8TDY8 1250 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 TBC1D22AQ8WUA7 517 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 EXOC4Q96A65 974 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 NAP1L4Q99733 375 aaKnown RBP13.2□□□□□ -0.3
ERBB2-206ENST00000578373 CDCA7Q9BWT1 371 aaPredicted RBP13.2□□□□□ -0.3
ERBB2-206ENST00000578373 PPP1R12CQ9BZL4 782 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 DCP1AQ9NPI6 582 aaPredicted RBP13.2□□□□□ -0.3
ERBB2-206ENST00000578373 ANKARQ7Z5J8 1434 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 TBC1D8O95759 1140 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 FBXO2Q9UK22 296 aaPredicted RBP13.2□□□□□ -0.3
ERBB2-206ENST00000578373 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.2□□□□□ -0.3
ERBB2-206ENST00000578373 GJA3Q9Y6H8 435 aa13.2□□□□□ -0.3
ERBB2-206ENST00000578373 MORC2Q9Y6X9 1032 aaPredicted RBP13.2□□□□□ -0.3
ERBB2-206ENST00000578373 CLRN2A0PK11 232 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 MYO1CO00159 1063 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 ZKSCAN8Q15776 578 aaPredicted RBP13.19□□□□□ -0.3
ERBB2-206ENST00000578373 NFRKBQ6P4R8 1299 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 RAD9BQ6WBX8 426 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 PPP1R21Q6ZMI0 780 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 MINPP1Q9UNW1 487 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 USP17L15C9J2P7 530 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 USP17L13C9JLJ4 530 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 USP17L11C9JVI0 530 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 USP17L18D6R9N7 530 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 USP17L22D6RA61 530 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 USP17L17D6RBQ6 530 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 USP17L19D6RCP7 530 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 USP17L20D6RJB6 530 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 ZNF185O15231 689 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 USP17L24Q0WX57 530 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 NNTQ13423 1086 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 USP17L6PQ6QN14 398 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.19□□□□□ -0.3
ERBB2-206ENST00000578373 TMEM47Q9BQJ4 181 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 FUCA2Q9BTY2 467 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 JRKLQ9Y4A0 524 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 K7ENM7 598 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 ARHGAP25P42331 645 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 CDK8P49336 464 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 E2F5Q15329 346 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 FAM102BQ5T8I3 360 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 CCDC170Q8IYT3 715 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 CACNA2D3Q8IZS8 1091 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 SYCE1Q8N0S2 351 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.19□□□□□ -0.3
ERBB2-206ENST00000578373 KIFAP3Q92845 792 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 MAGOHBQ96A72 148 aaKnown RBP13.19□□□□□ -0.3
ERBB2-206ENST00000578373 ALDH8A1Q9H2A2 487 aaPredicted RBP13.19□□□□□ -0.3
ERBB2-206ENST00000578373 EMILIN3Q9NT22 766 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 USP31Q70CQ4 1352 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 ABCC12Q96J65 1359 aa13.19□□□□□ -0.3
ERBB2-206ENST00000578373 FRMD3A2A2Y4 597 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 ATP8B1O43520 1251 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 GFPT1Q06210 699 aaPredicted RBP13.18□□□□□ -0.3
ERBB2-206ENST00000578373 SNX1Q13596 522 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 BRINP3Q76B58 766 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 SRBD1Q8N5C6 995 aaKnown RBP13.18□□□□□ -0.3
ERBB2-206ENST00000578373 TBC1D31Q96DN5 1066 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 SERPINB13Q9UIV8 391 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 HPS5Q9UPZ3 1129 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 CD2APQ9Y5K6 639 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 COL4A3BPQ9Y5P4 624 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 USP17L5A8MUK1 530 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 KCNQ2O43526 872 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 ATP1A1P05023 1023 aaKnown RBP13.18□□□□□ -0.3
ERBB2-206ENST00000578373 ZNF131P52739 623 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 TMC4Q7Z404 712 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 LARGE2Q8N3Y3 721 aa13.18□□□□□ -0.3
ERBB2-206ENST00000578373 PROCA1Q8NCQ7 364 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms