RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 BAIAP3O94812 1187 aa13.71□□□□□ -0.21
CTDNEP1-212ENST00000576613 MX1P20591 662 aa13.71□□□□□ -0.21
CTDNEP1-212ENST00000576613 TTBK2Q6IQ55 1244 aa13.71□□□□□ -0.21
CTDNEP1-212ENST00000576613 HERC6Q8IVU3 1022 aa13.71□□□□□ -0.21
CTDNEP1-212ENST00000576613 DNERQ8NFT8 737 aa13.71□□□□□ -0.21
CTDNEP1-212ENST00000576613 ARNTL2Q8WYA1 636 aa13.71□□□□□ -0.21
CTDNEP1-212ENST00000576613 GPCPD1Q9NPB8 672 aa13.71□□□□□ -0.21
CTDNEP1-212ENST00000576613 PRRC2BQ5JSZ5 2229 aaKnown RBP13.71□□□□□ -0.22
CTDNEP1-212ENST00000576613 TXNP10599 105 aaKnown RBP13.7□□□□□ -0.22
CTDNEP1-212ENST00000576613 EDNRBP24530 442 aa13.7□□□□□ -0.22
CTDNEP1-212ENST00000576613 KCNJ6P48051 423 aa13.7□□□□□ -0.22
CTDNEP1-212ENST00000576613 TAP1Q03518 808 aa13.7□□□□□ -0.22
CTDNEP1-212ENST00000576613 RRP12Q5JTH9 1297 aaKnown RBP13.7□□□□□ -0.22
CTDNEP1-212ENST00000576613 DIEXFQ68CQ4 756 aaKnown RBP13.7□□□□□ -0.22
CTDNEP1-212ENST00000576613 CLEC4DQ8WXI8 215 aa13.7□□□□□ -0.22
CTDNEP1-212ENST00000576613 TMEM47Q9BQJ4 181 aa13.7□□□□□ -0.22
CTDNEP1-212ENST00000576613 COL4A4P53420 1690 aaPredicted RBP13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 WDR19Q8NEZ3 1342 aa13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 TLL1O43897 1013 aa13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 FGRP09769 529 aa13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 PDHBP11177 359 aa13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 CHMP4BP1P59074 171 aa13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 RPS6P62753 249 aaKnown RBP13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 ALX1Q15699 326 aa13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 VPS53Q5VIR6 699 aa13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 CAGE1Q8TC20 777 aa13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 OTUD7AQ8TE49 926 aaPredicted RBP13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 AFAP1L1Q8TED9 768 aa13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 HLA-CQ95604 372 aa13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 TCP11L1Q9NUJ3 509 aa13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 ZBTB47Q9UFB7 747 aaPredicted RBP13.69□□□□□ -0.22
CTDNEP1-212ENST00000576613 EPOPA6NHQ4 379 aa13.68□□□□□ -0.22
CTDNEP1-212ENST00000576613 PARNO95453 639 aaKnown RBP13.68□□□□□ -0.22
CTDNEP1-212ENST00000576613 ZNF543Q08ER8 600 aa13.68□□□□□ -0.22
CTDNEP1-212ENST00000576613 PTGISQ16647 500 aa13.68□□□□□ -0.22
CTDNEP1-212ENST00000576613 EVI5LQ96CN4 794 aa13.68□□□□□ -0.22
CTDNEP1-212ENST00000576613 ZBED2Q9BTP6 218 aa13.68□□□□□ -0.22
CTDNEP1-212ENST00000576613 HELLSQ9NRZ9 838 aa13.68□□□□□ -0.22
CTDNEP1-212ENST00000576613 HCN4Q9Y3Q4 1203 aa13.68□□□□□ -0.22
CTDNEP1-212ENST00000576613 PTPRSQ13332 1948 aa13.67□□□□□ -0.22
CTDNEP1-212ENST00000576613 PCP11498 1178 aaKnown RBP13.67□□□□□ -0.22
CTDNEP1-212ENST00000576613 GRB10Q13322 594 aa13.67□□□□□ -0.22
CTDNEP1-212ENST00000576613 GPATCH4Q5T3I0 446 aaKnown RBP13.67□□□□□ -0.22
CTDNEP1-212ENST00000576613 KRT40Q6A162 431 aa13.67□□□□□ -0.22
CTDNEP1-212ENST00000576613 RGS22Q8NE09 1264 aa13.67□□□□□ -0.22
CTDNEP1-212ENST00000576613 PPP1R13LQ8WUF5 828 aa13.67□□□□□ -0.22
CTDNEP1-212ENST00000576613 COPS5Q92905 334 aa13.67□□□□□ -0.22
CTDNEP1-212ENST00000576613 TTC14Q96N46 770 aa13.67□□□□□ -0.22
CTDNEP1-212ENST00000576613 MAF1Q9H063 256 aa13.67□□□□□ -0.22
CTDNEP1-212ENST00000576613 ARIH1Q9Y4X5 557 aaPredicted RBP13.67□□□□□ -0.22
CTDNEP1-212ENST00000576613 ZMYM6O95789 1325 aa13.66□□□□□ -0.22
CTDNEP1-212ENST00000576613 ARHGEF15O94989 841 aa13.66□□□□□ -0.22
CTDNEP1-212ENST00000576613 GH1P01241 217 aa13.66□□□□□ -0.22
CTDNEP1-212ENST00000576613 FGAP02671 866 aa13.66□□□□□ -0.22
CTDNEP1-212ENST00000576613 SELPP16109 830 aa13.66□□□□□ -0.22
CTDNEP1-212ENST00000576613 WDR5P61964 334 aaKnown RBP13.66□□□□□ -0.22
CTDNEP1-212ENST00000576613 USH1GQ495M9 461 aa13.66□□□□□ -0.22
CTDNEP1-212ENST00000576613 LRRC8DQ7L1W4 858 aa13.66□□□□□ -0.22
CTDNEP1-212ENST00000576613 SESTD1Q86VW0 696 aa13.66□□□□□ -0.22
CTDNEP1-212ENST00000576613 LMCD1Q9NZU5 365 aa13.66□□□□□ -0.22
CTDNEP1-212ENST00000576613 TET1Q8NFU7 2136 aa13.66□□□□□ -0.22
CTDNEP1-212ENST00000576613 TRIP12Q14669 1992 aaPredicted RBP13.65□□□□□ -0.22
CTDNEP1-212ENST00000576613 ARIH2O95376 493 aa13.65□□□□□ -0.22
CTDNEP1-212ENST00000576613 MMP3P08254 477 aa13.65□□□□□ -0.22
CTDNEP1-212ENST00000576613 SNHG28P0DPA3 235 aa13.65□□□□□ -0.22
CTDNEP1-212ENST00000576613 CASTP20810 708 aaKnown RBP13.65□□□□□ -0.22
CTDNEP1-212ENST00000576613 MCMDC2Q4G0Z9 681 aa13.65□□□□□ -0.22
CTDNEP1-212ENST00000576613 TMEM31Q5JXX7 168 aa13.65□□□□□ -0.22
CTDNEP1-212ENST00000576613 CCDC62Q6P9F0 684 aa13.65□□□□□ -0.22
CTDNEP1-212ENST00000576613 CNKSR3Q6P9H4 555 aa13.65□□□□□ -0.22
CTDNEP1-212ENST00000576613 MFSD6Q6ZSS7 791 aa13.65□□□□□ -0.22
CTDNEP1-212ENST00000576613 TICAM2Q86XR7 235 aa13.65□□□□□ -0.22
CTDNEP1-212ENST00000576613 AFG1LQ8WV93 481 aa13.65□□□□□ -0.22
CTDNEP1-212ENST00000576613 LRFN3Q9BTN0 628 aa13.65□□□□□ -0.22
CTDNEP1-212ENST00000576613 SALL3Q9BXA9 1300 aa13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 KIAA1217Q5T5P2 1943 aa13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 LPXNO60711 386 aa13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 EFCAB14O75071 495 aa13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 RBL2Q08999 1139 aa13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 DGKDQ16760 1214 aa13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 GDF6Q6KF10 455 aaPredicted RBP13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 SEPT14Q6ZU15 432 aa13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 C7orf31Q8N865 590 aa13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 NSUN6Q8TEA1 469 aaKnown RBP13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 KATNAL1Q9BW62 490 aa13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 RNF41Q9H4P4 317 aaPredicted RBP13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 EPHX3Q9H6B9 360 aa13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 PCDHB15Q9Y5E8 787 aa13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 ABCB11O95342 1321 aa13.64□□□□□ -0.23
CTDNEP1-212ENST00000576613 SIP14410 1827 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 A0A0D9SFI3 127 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 ABHD14A-ACY1A0A1B0GW23 586 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 LCHNA4D1U4 455 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 GJB5O95377 273 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 CXCL10P02778 98 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 HSPD1P10809 573 aaKnown RBP13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 CKBP12277 381 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 HOXD11P31277 338 aaPredicted RBP13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 HAND2P61296 217 aa13.63□□□□□ -0.23
CTDNEP1-212ENST00000576613 ARHGAP1Q07960 439 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms