RNA–Protein interactions for RNA: ENST00000576036.5

LITAF-218, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LITAF, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-218ENST00000576036 ALG1Q9BT22 464 aa18■□□□□ 0.47
LITAF-218ENST00000576036 PXMP2Q9NR77 195 aa18■□□□□ 0.47
LITAF-218ENST00000576036 TMEM260Q9NX78 707 aa18■□□□□ 0.47
LITAF-218ENST00000576036 KIAA0100Q14667 2235 aaKnown RBP18■□□□□ 0.47
LITAF-218ENST00000576036 K7ELQ4 463 aaPredicted RBP17.99■□□□□ 0.47
LITAF-218ENST00000576036 M0R2N6 131 aa17.99■□□□□ 0.47
LITAF-218ENST00000576036 PRKAR2AP13861 404 aaKnown RBP17.99■□□□□ 0.47
LITAF-218ENST00000576036 MSL3Q8N5Y2 521 aaKnown RBP17.99■□□□□ 0.47
LITAF-218ENST00000576036 CUL5Q93034 780 aa17.99■□□□□ 0.47
LITAF-218ENST00000576036 RMDN3Q96TC7 470 aa17.99■□□□□ 0.47
LITAF-218ENST00000576036 PDCD2LQ9BRP1 358 aa17.99■□□□□ 0.47
LITAF-218ENST00000576036 PHF20Q9BVI0 1012 aa17.99■□□□□ 0.47
LITAF-218ENST00000576036 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.99■□□□□ 0.47
LITAF-218ENST00000576036 KCNJ14Q9UNX9 436 aa17.99■□□□□ 0.47
LITAF-218ENST00000576036 CENPFP49454 3210 aa17.99■□□□□ 0.47
LITAF-218ENST00000576036 ZNF865P0CJ78 1059 aaPredicted RBP17.98■□□□□ 0.47
LITAF-218ENST00000576036 EIF2AK2P19525 551 aaKnown RBP17.98■□□□□ 0.47
LITAF-218ENST00000576036 CCND3P30281 292 aaPredicted RBP17.98■□□□□ 0.47
LITAF-218ENST00000576036 FOSBP53539 338 aa17.98■□□□□ 0.47
LITAF-218ENST00000576036 DAGLBQ8NCG7 672 aa17.98■□□□□ 0.47
LITAF-218ENST00000576036 RASGRP4Q8TDF6 673 aa17.98■□□□□ 0.47
LITAF-218ENST00000576036 PGBD1Q96JS3 809 aa17.98■□□□□ 0.47
LITAF-218ENST00000576036 UNC93B1Q9H1C4 597 aa17.98■□□□□ 0.47
LITAF-218ENST00000576036 ADD3Q9UEY8 706 aaKnown RBP17.98■□□□□ 0.47
LITAF-218ENST00000576036 LOC102724159A0A0B4J2E5 919 aa17.97■□□□□ 0.47
LITAF-218ENST00000576036 ASB14A6NK59 587 aa17.97■□□□□ 0.47
LITAF-218ENST00000576036 EDIL3O43854 480 aa17.97■□□□□ 0.47
LITAF-218ENST00000576036 UBXN2AP68543 259 aa17.97■□□□□ 0.47
LITAF-218ENST00000576036 PGM5Q15124 567 aa17.97■□□□□ 0.47
LITAF-218ENST00000576036 PWP2Q15269 919 aaKnown RBP17.97■□□□□ 0.47
LITAF-218ENST00000576036 MFSD14CQ5VZR4 134 aa17.97■□□□□ 0.47
LITAF-218ENST00000576036 FAM177A1Q8N128 213 aaPredicted RBP17.97■□□□□ 0.47
LITAF-218ENST00000576036 CCDC148Q8NFR7 591 aa17.97■□□□□ 0.47
LITAF-218ENST00000576036 NSUN6Q8TEA1 469 aaKnown RBP17.97■□□□□ 0.47
LITAF-218ENST00000576036 BIN2Q9UBW5 565 aaPredicted RBP17.97■□□□□ 0.47
LITAF-218ENST00000576036 PCDHA6Q9UN73 950 aa17.97■□□□□ 0.47
LITAF-218ENST00000576036 PCDHA8Q9Y5H6 950 aa17.97■□□□□ 0.47
LITAF-218ENST00000576036 ADCY6O43306 1168 aa17.96■□□□□ 0.47
LITAF-218ENST00000576036 NR3C2P08235 984 aa17.96■□□□□ 0.47
LITAF-218ENST00000576036 MRPL12P52815 198 aaKnown RBP17.96■□□□□ 0.47
LITAF-218ENST00000576036 NLRP5P59047 1200 aa17.96■□□□□ 0.47
LITAF-218ENST00000576036 HMGN5P82970 282 aaKnown RBP17.96■□□□□ 0.47
LITAF-218ENST00000576036 IFFO2Q5TF58 517 aa17.96■□□□□ 0.47
LITAF-218ENST00000576036 JAKMIP3Q5VZ66 844 aa17.96■□□□□ 0.47
LITAF-218ENST00000576036 TAPT1Q6NXT6 567 aa17.96■□□□□ 0.47
LITAF-218ENST00000576036 TEX2Q8IWB9 1127 aa17.96■□□□□ 0.47
LITAF-218ENST00000576036 FBXO16Q8IX29 292 aaPredicted RBP17.96■□□□□ 0.47
LITAF-218ENST00000576036 OXER1Q8TDS5 423 aa17.96■□□□□ 0.47
LITAF-218ENST00000576036 CCDC12Q8WUD4 166 aaPredicted RBP17.96■□□□□ 0.47
LITAF-218ENST00000576036 CRYGNQ8WXF5 182 aa17.96■□□□□ 0.47
LITAF-218ENST00000576036 ABHD8Q96I13 439 aa17.96■□□□□ 0.47
LITAF-218ENST00000576036 ZFP91Q96JP5 570 aaPredicted RBP17.96■□□□□ 0.47
LITAF-218ENST00000576036 ANO3Q9BYT9 981 aa17.96■□□□□ 0.47
LITAF-218ENST00000576036 C6orf50Q9HD87 102 aa17.96■□□□□ 0.47
LITAF-218ENST00000576036 PCDHA4Q9UN74 947 aa17.96■□□□□ 0.47
LITAF-218ENST00000576036 RGS20O76081 388 aa17.95■□□□□ 0.46
LITAF-218ENST00000576036 MYCP01106 439 aaPredicted RBP17.95■□□□□ 0.46
LITAF-218ENST00000576036 CCL5P13501 91 aa17.95■□□□□ 0.46
LITAF-218ENST00000576036 MRPS9P82933 396 aaKnown RBP17.95■□□□□ 0.46
LITAF-218ENST00000576036 TMEM63BQ5T3F8 832 aa17.95■□□□□ 0.46
LITAF-218ENST00000576036 ARHGEF16Q5VV41 709 aa17.95■□□□□ 0.46
LITAF-218ENST00000576036 KRT40Q6A162 431 aa17.95■□□□□ 0.46
LITAF-218ENST00000576036 WASF1Q92558 559 aa17.95■□□□□ 0.46
LITAF-218ENST00000576036 TNFRSF25Q93038 417 aa17.95■□□□□ 0.46
LITAF-218ENST00000576036 IWS1Q96ST2 819 aa17.95■□□□□ 0.46
LITAF-218ENST00000576036 GLT8D2Q9H1C3 349 aa17.95■□□□□ 0.46
LITAF-218ENST00000576036 PAK6Q9NQU5 681 aaPredicted RBP17.95■□□□□ 0.46
LITAF-218ENST00000576036 PDGFCQ9NRA1 345 aa17.95■□□□□ 0.46
LITAF-218ENST00000576036 NRBP1Q9UHY1 535 aa17.95■□□□□ 0.46
LITAF-218ENST00000576036 PTGS1P23219 599 aa17.94■□□□□ 0.46
LITAF-218ENST00000576036 GJB2P29033 226 aa17.94■□□□□ 0.46
LITAF-218ENST00000576036 GNA11P29992 359 aa17.94■□□□□ 0.46
LITAF-218ENST00000576036 AP3B2Q13367 1082 aa17.94■□□□□ 0.46
LITAF-218ENST00000576036 ACVR2BQ13705 512 aa17.94■□□□□ 0.46
LITAF-218ENST00000576036 EARS2Q5JPH6 523 aaKnown RBP17.94■□□□□ 0.46
LITAF-218ENST00000576036 EEPD1Q7L9B9 569 aa17.94■□□□□ 0.46
LITAF-218ENST00000576036 VSIG10LQ86VR7 867 aa17.94■□□□□ 0.46
LITAF-218ENST00000576036 BLIDQ8IZY5 108 aa17.94■□□□□ 0.46
LITAF-218ENST00000576036 REXO1Q8N1G1 1221 aaKnown RBP17.94■□□□□ 0.46
LITAF-218ENST00000576036 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.94■□□□□ 0.463e-7■■□□□ 13.1
LITAF-218ENST00000576036 ABHD16BQ9H3Z7 469 aa17.94■□□□□ 0.46
LITAF-218ENST00000576036 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.93■□□□□ 0.46
LITAF-218ENST00000576036 RBM47A0AV96 593 aaKnown RBP17.93■□□□□ 0.46
LITAF-218ENST00000576036 FAM205CA6NFA0 338 aa17.93■□□□□ 0.46
LITAF-218ENST00000576036 MMP1P03956 469 aa17.93■□□□□ 0.46
LITAF-218ENST00000576036 SREBF1P36956 1147 aa17.93■□□□□ 0.46
LITAF-218ENST00000576036 GUCY1B3Q02153 619 aa17.93■□□□□ 0.46
LITAF-218ENST00000576036 PDE4DQ08499 809 aa17.93■□□□□ 0.46
LITAF-218ENST00000576036 LHX8Q68G74 356 aa17.93■□□□□ 0.46
LITAF-218ENST00000576036 HSCBQ8IWL3 235 aa17.93■□□□□ 0.46
LITAF-218ENST00000576036 LENG1Q96BZ8 264 aaPredicted RBP17.93■□□□□ 0.46
LITAF-218ENST00000576036 VTA1Q9NP79 307 aa17.93■□□□□ 0.46
LITAF-218ENST00000576036 ZHX1Q9UKY1 873 aaPredicted RBP17.93■□□□□ 0.46
LITAF-218ENST00000576036 WDR81Q562E7 1941 aa17.92■□□□□ 0.46
LITAF-218ENST00000576036 POTEFA5A3E0 1075 aa17.92■□□□□ 0.46
LITAF-218ENST00000576036 SPDYE3A6NKU9 549 aa17.92■□□□□ 0.46
LITAF-218ENST00000576036 ARIH2O95376 493 aa17.92■□□□□ 0.46
LITAF-218ENST00000576036 FOSP01100 380 aaPredicted RBP17.92■□□□□ 0.46
LITAF-218ENST00000576036 MYCLP12524 364 aaPredicted RBP17.92■□□□□ 0.46
LITAF-218ENST00000576036 SEMA3FQ13275 785 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms