RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 GJA9P57773 515 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 TROAPQ12815 778 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 KCNA10Q16322 511 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 TRIM60Q495X7 471 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 IQSEC1Q6DN90 963 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 NFXL1Q6ZNB6 911 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 HOMER1Q86YM7 354 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 MCF2L2Q86YR7 1114 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 TMTC2Q8N394 836 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 PCSK9Q8NBP7 692 aaKnown RBP10.54□□□□□ -0.72
NDE1-207ENST00000573203 RGS22Q8NE09 1264 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 KLHDC9Q8NEP7 349 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 DNERQ8NFT8 737 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 MORC4Q8TE76 937 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 NUP133Q8WUM0 1156 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 TMEM87BQ96K49 555 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 MTA3Q9BTC8 594 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 AMNQ9BXJ7 453 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 UPF3AQ9H1J1 476 aaKnown RBP10.54□□□□□ -0.72
NDE1-207ENST00000573203 LY9Q9HBG7 655 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 PRKAG2Q9UGJ0 569 aa10.54□□□□□ -0.72
NDE1-207ENST00000573203 MYADML2A6NDP7 307 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 MOXD2PA6NHM9 499 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 CCDC69A6NI79 296 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 SH2B2O14492 632 aaPredicted RBP10.53□□□□□ -0.72
NDE1-207ENST00000573203 ZBTB5O15062 677 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 CST5P28325 142 aaPredicted RBP10.53□□□□□ -0.72
NDE1-207ENST00000573203 KIF5BP33176 963 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 MAGEA10P43363 369 aaPredicted RBP10.53□□□□□ -0.72
NDE1-207ENST00000573203 FOXK1P85037 733 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 PDE4DQ08499 809 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 SNX17Q15036 470 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 GNASQ5JWF2 1037 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 TAPT1Q6NXT6 567 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 TLK2Q86UE8 772 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 ZNF654Q8IZM8 581 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 CTCFLQ8NI51 663 aaPredicted RBP10.53□□□□□ -0.72
NDE1-207ENST00000573203 TBC1D5Q92609 795 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 VTI1AQ96AJ9 217 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 MTMR8Q96EF0 704 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 GDF15Q99988 308 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 MAF1Q9H063 256 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 AP5M1Q9H0R1 490 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 PRO3102Q9H379 93 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 PRDM5Q9NQX1 630 aaPredicted RBP10.53□□□□□ -0.72
NDE1-207ENST00000573203 STARD7Q9NQZ5 370 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 PDGFCQ9NRA1 345 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 TRIOBPQ9H2D6 2365 aa10.53□□□□□ -0.72
NDE1-207ENST00000573203 DYNC1LI2O43237 492 aaPredicted RBP10.52□□□□□ -0.73
NDE1-207ENST00000573203 DDAH1O94760 285 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 CFBP00751 764 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 ASGR1P07306 291 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 SMPD1P17405 629 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 BEX3Q00994 111 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 TRAF1Q13077 416 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 C1orf53Q5VUE5 145 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 CCSAPQ6IQ19 270 aaPredicted RBP10.52□□□□□ -0.73
NDE1-207ENST00000573203 GLT1D1Q96MS3 346 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 TBC1D32Q96NH3 1257 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 NEK1Q96PY6 1258 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 TAAR1Q96RJ0 339 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 PIGSQ96S52 555 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 MAP3K14Q99558 947 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 LBHD1Q9BQE6 289 aaPredicted RBP10.52□□□□□ -0.73
NDE1-207ENST00000573203 MYL10Q9BUA6 226 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 LRRC2Q9BYS8 371 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 WDR11Q9BZH6 1224 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 RIOX1Q9H6W3 641 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 GNEQ9Y223 722 aaKnown RBP10.52□□□□□ -0.73
NDE1-207ENST00000573203 PCDHA1Q9Y5I3 950 aa10.52□□□□□ -0.73
NDE1-207ENST00000573203 PNMA6FA0A0J9YX94 578 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 A0A1W2PPC1 479 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 CYTH3O43739 400 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 ZEB2O60315 1214 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 PQBP1O60828 265 aaKnown RBP10.51□□□□□ -0.73
NDE1-207ENST00000573203 PPP1R11O60927 126 aaPredicted RBP10.51□□□□□ -0.73
NDE1-207ENST00000573203 CALM1P0DP23 149 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 CALM2P0DP24 149 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 CALM3P0DP25 149 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 EDNRBP24530 442 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 BMP8BP34820 402 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 LIFRP42702 1097 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 EMP3P54852 163 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 MDM2Q00987 491 aaPredicted RBP10.51□□□□□ -0.73
NDE1-207ENST00000573203 TLE2Q04725 743 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 COL9A3Q14050 684 aaPredicted RBP10.51□□□□□ -0.73
NDE1-207ENST00000573203 KRT32Q14532 448 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 FSCN1Q16658 493 aaKnown RBP10.51□□□□□ -0.73
NDE1-207ENST00000573203 SLC35G1Q2M3R5 365 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 DUSP28Q4G0W2 176 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 ARHGEF16Q5VV41 709 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 SYTL5Q8TDW5 730 aaPredicted RBP10.51□□□□□ -0.73
NDE1-207ENST00000573203 NSUN6Q8TEA1 469 aaKnown RBP10.51□□□□□ -0.73
NDE1-207ENST00000573203 PIBF1Q8WXW3 757 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 RMDN3Q96TC7 470 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 UBE2OQ9C0C9 1292 aaKnown RBP10.51□□□□□ -0.73
NDE1-207ENST00000573203 COL20A1Q9P218 1284 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 Q9Y3F1 56 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 SLC12A7Q9Y666 1083 aa10.51□□□□□ -0.73
NDE1-207ENST00000573203 ELP1O95163 1332 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms