RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 FSD1Q9BTV5 496 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 RAVER2Q9HCJ3 691 aaKnown RBP11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 PRDM5Q9NQX1 630 aaPredicted RBP11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 CLIP2Q9UDT6 1046 aa11.01□□□□□ -0.65
NPLOC4-210ENST00000572824 GBF1Q92538 1859 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 A0A1W2PPC1 479 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 TRIM43BA6NCK2 446 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 SEPT4O43236 478 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 ATP9BO43861 1147 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 ZNF865P0CJ78 1059 aaPredicted RBP11□□□□□ -0.65
NPLOC4-210ENST00000572824 FCER1AP12319 257 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 STAT3P40763 770 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 RNF20Q5VTR2 975 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 ZSCAN25Q6NSZ9 544 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 TRIM67Q6ZTA4 783 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 KIFC2Q96AC6 838 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 TRIM43Q96BQ3 446 aaPredicted RBP11□□□□□ -0.65
NPLOC4-210ENST00000572824 FAM161BQ96MY7 647 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 MROH8Q9H579 483 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 SH2D4AQ9H788 454 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 MKNK2Q9HBH9 465 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 PDLIM7Q9NR12 457 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 HOMER2Q9NSB8 354 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 ASTN1O14525 1302 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 PLIN4Q96Q06 1357 aa11□□□□□ -0.65
NPLOC4-210ENST00000572824 A0A0D9SFI3 127 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 SNAI1O95863 264 aaPredicted RBP10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 SKIP12755 728 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 MX1P20591 662 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 EPHB4P54760 987 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 CNTN2Q02246 1040 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 PPARAQ07869 468 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 TSGA10IPQ3SY00 556 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 INTS6LQ5JSJ4 861 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 TMEM63BQ5T3F8 832 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 SLC39A5Q6ZMH5 540 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 AMOTL1Q8IY63 956 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 DEFB123Q8N688 67 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 FAM227BQ96M60 508 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 PURBQ96QR8 312 aaKnown RBP10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 TINF2Q9BSI4 451 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 IL17RBQ9NRM6 502 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 MTMR4Q9NYA4 1195 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 NYAP2Q9P242 653 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 MTMR7Q9Y216 660 aa10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.99□□□□□ -0.65
NPLOC4-210ENST00000572824 A0A0C4DFX4 3053 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 TNFRSF10AO00220 468 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 STRNO43815 780 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 ADAMTS4O75173 837 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 ADH1CP00326 375 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 KCTD2Q14681 263 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 SNX17Q15036 470 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 KCTD1Q719H9 257 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 ZNF589Q86UQ0 364 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 ABRAQ8N0Z2 381 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 SNIP1Q8TAD8 396 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 BADQ92934 168 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 GPATCH3Q96I76 525 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 AGBL1Q96MI9 1066 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 CHMP4BQ9H444 224 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 XPNPEP3Q9NQH7 507 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 ZHX1Q9UKY1 873 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 ISY1Q9ULR0 285 aaKnown RBP10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 MAFBQ9Y5Q3 323 aaPredicted RBP10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 PRUNE2Q8WUY3 3088 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 ZNF536O15090 1300 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 TTC41PQ6P2S7 1318 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 SYNRGQ9UMZ2 1314 aa10.98□□□□□ -0.65
NPLOC4-210ENST00000572824 VCANP13611 3396 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 DNAJC25-GNG10A0A024R161 153 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 A0A1W2PQ45 241 aaPredicted RBP10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 A0A1W2PQY0 241 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 PATL2C9JE40 543 aaKnown RBP10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 TMEM232C9JQI7 657 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 KBTBD13C9JR72 458 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 SLC25A27O95847 323 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 PRR20EP86478 221 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 PRR20CP86479 221 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 PRR20DP86480 221 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 PRR20BP86481 221 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 PRR20AP86496 221 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 TFAP4Q01664 338 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 SHHQ15465 462 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 LRIT3Q3SXY7 679 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 ANKRD45Q5TZF3 282 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 SLFN13Q68D06 897 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 GIMAP6Q6P9H5 292 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 PLPP7Q8NBV4 271 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 GUCD1Q96NT3 240 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 TEX13BQ9BXU2 312 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 NAPBQ9H115 298 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 SLC38A10Q9HBR0 1119 aa10.97□□□□□ -0.65
NPLOC4-210ENST00000572824 MYO9BQ13459 2157 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 SCN5AQ14524 2016 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 MSCO60682 206 aa10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 PQBP1O60828 265 aaKnown RBP10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 ZFYP08048 801 aaPredicted RBP10.96□□□□□ -0.65
NPLOC4-210ENST00000572824 CAPN2P17655 700 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms