RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, human

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPG7-222	ENST00000569820	KAT2B	Q92831	832 aa		13.37	□□□□□ -0.27
SPG7-222	ENST00000569820	ITFG2	Q969R8	447 aa		13.37	□□□□□ -0.27
SPG7-222	ENST00000569820	DNAJC18	Q9H819	358 aa		13.37	□□□□□ -0.27
SPG7-222	ENST00000569820	FBXO2	Q9UK22	296 aa	Predicted RBP	13.37	□□□□□ -0.27
SPG7-222	ENST00000569820	MAN1B1	Q9UKM7	699 aa		13.37	□□□□□ -0.27
SPG7-222	ENST00000569820		A0A1B0GTH6	734 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820		H0YHG0	523 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	HLA-DOA	P06340	250 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	GOLGA8H	P0CJ92	632 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	RBM5	P52756	815 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	SARNP	P82979	210 aa	Known RBP	13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	RBL2	Q08999	1139 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	KRI1	Q8N9T8	703 aa	Known RBP	13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	CPLX3	Q8WVH0	158 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	CALR3	Q96L12	384 aa	Known RBP	13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	LZTS2	Q9BRK4	669 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	SPZ1	Q9BXG8	430 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	SH3GLB2	Q9NR46	395 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	KLRF2	D3W0D1	207 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	EBAG9	O00559	213 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	WNT7A	O00755	349 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	FOXN1	O15353	648 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	SLURP2	P0DP57	97 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	PTPRE	P23469	700 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	MCM3	P25205	808 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	CCT5	P48643	541 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	TYW1B	Q6NUM6	668 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	CLEC10A	Q8IUN9	316 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	SAMSN1	Q9NSI8	373 aa	Known RBP	13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	HPCAL4	Q9UM19	191 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	FER1L6	Q2WGJ9	1857 aa		13.36	□□□□□ -0.27
SPG7-222	ENST00000569820	SHOX2	O60902	331 aa	Predicted RBP	13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	NPM3	O75607	178 aa	Known RBP	13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	PARP1	P09874	1014 aa	Known RBP	13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	ERCC3	P19447	782 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	NLRP5	P59047	1200 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	SET	Q01105	290 aa	Predicted RBP	13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	GRIN1	Q05586	938 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	TCP10	Q12799	353 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	POSTN	Q15063	836 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	USP17L2	Q6R6M4	530 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	SH3BP5L	Q7L8J4	393 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	CPVL	Q9H3G5	476 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	A1CF	Q9NQ94	594 aa	Known RBP	13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	MYO6	Q9UM54	1294 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	FAM169A	Q9Y6X4	670 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	ARFGEF1	Q9Y6D6	1849 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	DDTL	A6NHG4	134 aa	Predicted RBP	13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	TRIM75P	A6NK02	468 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	HNRNPH1	P31943	449 aa	Known RBP	13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	IRX1	P78414	480 aa	Predicted RBP	13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	MDM2	Q00987	491 aa	Predicted RBP	13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	STIM1	Q13586	685 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	NCAPH2	Q6IBW4	605 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	DHX36	Q9H2U1	1008 aa	Known RBP	13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	MYO1A	Q9UBC5	1043 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	CEP131	Q9UPN4	1083 aa		13.35	□□□□□ -0.27
SPG7-222	ENST00000569820	COL2A1	P02458	1487 aa	Predicted RBP	13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	USP17L5	A8MUK1	530 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	TEX33	O43247	280 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	MFAP3L	O75121	409 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	PDHB	P11177	359 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	CALML3	P27482	149 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	LRRC47	Q8N1G4	583 aa	Known RBP	13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	FAM76A	Q8TAV0	307 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	ATRNL1	Q5VV63	1379 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	STXBP3	O00186	592 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	ZBTB7A	O95365	584 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	SNHG28	P0DPA3	235 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	EIF6	P56537	245 aa	Known RBP	13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	POTED	Q86YR6	584 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	CNGA4	Q8IV77	575 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	OTUD6B	Q8N6M0	293 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	ACRBP	Q8NEB7	543 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	COG1	Q8WTW3	980 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	RIN2	Q8WYP3	895 aa	Predicted RBP	13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	CRACR2A	Q9BSW2	395 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	BARHL2	Q9NY43	387 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	PCDHA4	Q9UN74	947 aa		13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	SRPRB	Q9Y5M8	271 aa	Known RBP	13.34	□□□□□ -0.27
SPG7-222	ENST00000569820	ANKRD33B	A6NCL7	494 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	FAM196B	A6NMK8	535 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820		M0R2N6	131 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	TTLL1	O95922	423 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	SMARCA1	P28370	1054 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	USP14	P54578	494 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	AMPD2	Q01433	879 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	MORC3	Q14149	939 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	NT5DC1	Q5TFE4	455 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	FBXW10	Q5XX13	1052 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	HEATR3	Q7Z4Q2	680 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	BLID	Q8IZY5	108 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	LARGE2	Q8N3Y3	721 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	ZNF579	Q8NAF0	562 aa	Known RBP	13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	MIEF2	Q96C03	454 aa		13.33	□□□□□ -0.28
SPG7-222	ENST00000569820	TDRD3	Q9H7E2	651 aa	Known RBP	13.33	□□□□□ -0.28

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