RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 MYL5Q02045 173 aa7.96□□□□□ -1.14
SMG1-215ENST00000568239 DPYDQ12882 1025 aa7.96□□□□□ -1.14
SMG1-215ENST00000568239 KRT79Q5XKE5 535 aa7.96□□□□□ -1.14
SMG1-215ENST00000568239 SH3RF1Q7Z6J0 888 aa7.96□□□□□ -1.14
SMG1-215ENST00000568239 TRMT44Q8IYL2 757 aaKnown RBP7.96□□□□□ -1.14
SMG1-215ENST00000568239 SNX29Q8TEQ0 813 aa7.96□□□□□ -1.14
SMG1-215ENST00000568239 KLRG1Q96E93 195 aa7.96□□□□□ -1.14
SMG1-215ENST00000568239 MTRQ99707 1265 aa7.96□□□□□ -1.14
SMG1-215ENST00000568239 RAVER2Q9HCJ3 691 aaKnown RBP7.96□□□□□ -1.14
SMG1-215ENST00000568239 EMILIN3Q9NT22 766 aa7.96□□□□□ -1.14
SMG1-215ENST00000568239 DACH1Q9UI36 760 aa7.96□□□□□ -1.14
SMG1-215ENST00000568239 ZNF75DP51815 510 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 STX17P56962 302 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 MORC3Q14149 939 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 TTLL12Q14166 644 aaPredicted RBP7.95□□□□□ -1.14
SMG1-215ENST00000568239 EAPPQ56P03 285 aaPredicted RBP7.95□□□□□ -1.14
SMG1-215ENST00000568239 NAALADL2Q58DX5 795 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 NT5DC1Q5TFE4 455 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 ILDR2Q71H61 639 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 KRT26Q7Z3Y9 468 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 IGSF22Q8N9C0 903 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 TRIML1Q8N9V2 468 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 MLKLQ8NB16 471 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 HAS1Q92839 578 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 GSDMAQ96QA5 445 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 NAP1L4Q99733 375 aaKnown RBP7.95□□□□□ -1.14
SMG1-215ENST00000568239 GINM1Q9NU53 330 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 MAPK8IP1Q9UQF2 711 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 GOLGA6L6A8MZA4 724 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 GTPBP6O43824 516 aaPredicted RBP7.95□□□□□ -1.14
SMG1-215ENST00000568239 CYP2W1Q8TAV3 490 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 BPIFA3Q9BQP9 254 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 FAM86B1E9PN63 330 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 PPP1R12BO60237 982 aaPredicted RBP7.95□□□□□ -1.14
SMG1-215ENST00000568239 PLA2G6O60733 806 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 COBLO75128 1261 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 SERPINC1P01008 464 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 RPN1P04843 607 aaKnown RBP7.95□□□□□ -1.14
SMG1-215ENST00000568239 ICAM1P05362 532 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 FAM86B2P0C5J1 330 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 ATP1A3P13637 1013 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 CDK11BP21127 795 aaKnown RBP7.95□□□□□ -1.14
SMG1-215ENST00000568239 FXR2P51116 673 aaKnown RBP eCLIP7.95□□□□□ -1.14
SMG1-215ENST00000568239 NCAPHQ15003 741 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 MCTP2Q6DN12 878 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 CREBRFQ8IUR6 639 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 SPATA20Q8TB22 786 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 NUDT12Q9BQG2 462 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 MMTAG2Q9BU76 263 aaKnown RBP7.95□□□□□ -1.14
SMG1-215ENST00000568239 FANCLQ9NW38 375 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 PPP2R3BQ9Y5P8 575 aa7.95□□□□□ -1.14
SMG1-215ENST00000568239 ABCB11O95342 1321 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 NFIBO00712 420 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 SSBP05455 408 aaKnown RBP eCLIP7.94□□□□□ -1.14
SMG1-215ENST00000568239 SREBF1P36956 1147 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 FMR1Q06787 632 aaKnown RBP eCLIP7.94□□□□□ -1.14
SMG1-215ENST00000568239 FILIP1Q7Z7B0 1213 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 ZSCAN30Q86W11 494 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 PLA2G4DQ86XP0 818 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 TMOD4Q9NZQ9 345 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 IFNKQ9P0W0 207 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 ZNF112Q9UJU3 913 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 PPP1R9AQ9ULJ8 1098 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 PIK3CDO00329 1044 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 IKBKBO14920 756 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 ZBED4O75132 1171 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 USP2O75604 605 aaPredicted RBP7.94□□□□□ -1.14
SMG1-215ENST00000568239 CCT6AP40227 531 aaKnown RBP7.94□□□□□ -1.14
SMG1-215ENST00000568239 STAT3P40763 770 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 ASIC1P78348 528 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 PDIA5Q14554 519 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 TPD52L1Q16890 204 aaPredicted RBP7.94□□□□□ -1.14
SMG1-215ENST00000568239 LRRC15Q8TF66 581 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 ATG4CQ96DT6 458 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 WDR18Q9BV38 432 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 RRAGDQ9NQL2 400 aaPredicted RBP7.94□□□□□ -1.14
SMG1-215ENST00000568239 NRBP1Q9UHY1 535 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 NFE2L3Q9Y4A8 694 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 CSADQ9Y600 493 aa7.94□□□□□ -1.14
SMG1-215ENST00000568239 ZNF536O15090 1300 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 CD44P16070 742 aaKnown RBP7.93□□□□□ -1.14
SMG1-215ENST00000568239 EPHX2P34913 555 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 GRB10Q13322 594 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 MCM6Q14566 821 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 HS1BP3Q53T59 392 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 NCAPH2Q6IBW4 605 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 SARM1Q6SZW1 724 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 NSMFQ6X4W1 530 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 SLC30A10Q6XR72 485 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 SV2BQ7L1I2 683 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 DYMQ7RTS9 669 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 CCDC186Q7Z3E2 898 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 SLFN12Q8IYM2 578 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 WNK4Q96J92 1243 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 XPO4Q9C0E2 1151 aaKnown RBP7.93□□□□□ -1.14
SMG1-215ENST00000568239 EHMT1Q9H9B1 1298 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 SLC38A10Q9HBR0 1119 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 KBTBD4Q9NVX7 518 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 RMND1Q9NWS8 449 aa7.93□□□□□ -1.14
SMG1-215ENST00000568239 GDAQ9Y2T3 454 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms