RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 TROAPQ12815 778 aa17.68■□□□□ 0.42
CMTM3-212ENST00000566121 PPP2R5BQ15173 497 aa17.68■□□□□ 0.42
CMTM3-212ENST00000566121 STXBP2Q15833 593 aa17.68■□□□□ 0.42
CMTM3-212ENST00000566121 TMEM63BQ5T3F8 832 aa17.68■□□□□ 0.42
CMTM3-212ENST00000566121 NFRKBQ6P4R8 1299 aa17.68■□□□□ 0.42
CMTM3-212ENST00000566121 STOX1Q6ZVD7 989 aa17.68■□□□□ 0.42
CMTM3-212ENST00000566121 MTG1Q9BT17 334 aaPredicted RBP17.68■□□□□ 0.42
CMTM3-212ENST00000566121 ALDH8A1Q9H2A2 487 aaPredicted RBP17.68■□□□□ 0.42
CMTM3-212ENST00000566121 IL23AQ9NPF7 189 aa17.68■□□□□ 0.42
CMTM3-212ENST00000566121 PTH1RQ03431 593 aa17.67■□□□□ 0.42
CMTM3-212ENST00000566121 SART3Q15020 963 aaKnown RBP17.67■□□□□ 0.42
CMTM3-212ENST00000566121 CYB5R4Q7L1T6 521 aa17.67■□□□□ 0.42
CMTM3-212ENST00000566121 SLC17A8Q8NDX2 589 aa17.67■□□□□ 0.42
CMTM3-212ENST00000566121 NCOA7Q8NI08 942 aa17.67■□□□□ 0.42
CMTM3-212ENST00000566121 HERVK_113Q902F9 699 aa17.67■□□□□ 0.42
CMTM3-212ENST00000566121 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.67■□□□□ 0.422e-6■■□□□ 14.2
CMTM3-212ENST00000566121 NOC4LQ9BVI4 516 aaKnown RBP17.67■□□□□ 0.42
CMTM3-212ENST00000566121 DDX49Q9Y6V7 483 aaKnown RBP17.67■□□□□ 0.42
CMTM3-212ENST00000566121 SCN10AQ9Y5Y9 1956 aa17.67■□□□□ 0.42
CMTM3-212ENST00000566121 E7EWF7 191 aa17.66■□□□□ 0.42
CMTM3-212ENST00000566121 PFKMP08237 780 aa17.66■□□□□ 0.42
CMTM3-212ENST00000566121 TXNP10599 105 aaKnown RBP17.66■□□□□ 0.42
CMTM3-212ENST00000566121 GRM4Q14833 912 aa17.66■□□□□ 0.42
CMTM3-212ENST00000566121 USH1GQ495M9 461 aa17.66■□□□□ 0.42
CMTM3-212ENST00000566121 KCNV1Q6PIU1 500 aa17.66■□□□□ 0.42
CMTM3-212ENST00000566121 SESTD1Q86VW0 696 aa17.66■□□□□ 0.42
CMTM3-212ENST00000566121 RPUSD2Q8IZ73 545 aaKnown RBP17.66■□□□□ 0.42
CMTM3-212ENST00000566121 STAG2Q8N3U4 1231 aa17.66■□□□□ 0.42
CMTM3-212ENST00000566121 OR6J1Q8NGC5 347 aa17.66■□□□□ 0.42
CMTM3-212ENST00000566121 IGDCC4Q8TDY8 1250 aa17.66■□□□□ 0.42
CMTM3-212ENST00000566121 TBC1D5Q92609 795 aa17.66■□□□□ 0.42
CMTM3-212ENST00000566121 RMDN3Q96TC7 470 aa17.66■□□□□ 0.42
CMTM3-212ENST00000566121 CPVLQ9H3G5 476 aa17.66■□□□□ 0.42
CMTM3-212ENST00000566121 HIPK3Q9H422 1215 aa17.66■□□□□ 0.42
CMTM3-212ENST00000566121 ERICH2A1L162 156 aa17.65■□□□□ 0.42
CMTM3-212ENST00000566121 OPLAHO14841 1288 aa17.65■□□□□ 0.42
CMTM3-212ENST00000566121 B4GALT4O60513 344 aa17.65■□□□□ 0.42
CMTM3-212ENST00000566121 TGFB3P10600 412 aa17.65■□□□□ 0.42
CMTM3-212ENST00000566121 CSF2RAP15509 400 aa17.65■□□□□ 0.42
CMTM3-212ENST00000566121 TMTC2Q8N394 836 aa17.65■□□□□ 0.42
CMTM3-212ENST00000566121 TAAR1Q96RJ0 339 aa17.65■□□□□ 0.42
CMTM3-212ENST00000566121 MTIF3Q9H2K0 278 aaKnown RBP17.65■□□□□ 0.42
CMTM3-212ENST00000566121 TTYH1Q9H313 450 aaPredicted RBP17.65■□□□□ 0.42
CMTM3-212ENST00000566121 GPHNQ9NQX3 736 aaPredicted RBP17.65■□□□□ 0.42
CMTM3-212ENST00000566121 COL20A1Q9P218 1284 aa17.65■□□□□ 0.42
CMTM3-212ENST00000566121 PITPNM1O00562 1244 aa17.64■□□□□ 0.41
CMTM3-212ENST00000566121 IFIT3O14879 490 aaKnown RBP17.64■□□□□ 0.41
CMTM3-212ENST00000566121 NR3C2P08235 984 aa17.64■□□□□ 0.41
CMTM3-212ENST00000566121 HOXD8P13378 290 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-212ENST00000566121 RALYLQ86SE5 291 aaKnown RBP17.64■□□□□ 0.41
CMTM3-212ENST00000566121 VSIG10LQ86VR7 867 aa17.64■□□□□ 0.41
CMTM3-212ENST00000566121 CDX2Q99626 313 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-212ENST00000566121 TRPV6Q9H1D0 765 aa17.64■□□□□ 0.41
CMTM3-212ENST00000566121 PXMP2Q9NR77 195 aa17.64■□□□□ 0.41
CMTM3-212ENST00000566121 DDX41Q9UJV9 622 aaKnown RBP17.64■□□□□ 0.41
CMTM3-212ENST00000566121 PCDHA1Q9Y5I3 950 aa17.64■□□□□ 0.41
CMTM3-212ENST00000566121 PRUNE2Q8WUY3 3088 aa17.63■□□□□ 0.41
CMTM3-212ENST00000566121 PNMA6FA0A0J9YX94 578 aa17.63■□□□□ 0.41
CMTM3-212ENST00000566121 GH1P01241 217 aa17.63■□□□□ 0.41
CMTM3-212ENST00000566121 CYP2C18P33260 490 aa17.63■□□□□ 0.41
CMTM3-212ENST00000566121 RFC2P35250 354 aa17.63■□□□□ 0.41
CMTM3-212ENST00000566121 WTAPQ15007 396 aa17.63■□□□□ 0.41
CMTM3-212ENST00000566121 ZNF365Q70YC5 407 aa17.63■□□□□ 0.41
CMTM3-212ENST00000566121 TEX2Q8IWB9 1127 aa17.63■□□□□ 0.41
CMTM3-212ENST00000566121 MB21D2Q8IYB1 491 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-212ENST00000566121 LZTS2Q9BRK4 669 aa17.63■□□□□ 0.41
CMTM3-212ENST00000566121 VAT1LQ9HCJ6 419 aa17.63■□□□□ 0.41
CMTM3-212ENST00000566121 PPP1R11O60927 126 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-212ENST00000566121 ARIH2O95376 493 aa17.62■□□□□ 0.41
CMTM3-212ENST00000566121 FGBP02675 491 aa17.62■□□□□ 0.41
CMTM3-212ENST00000566121 ARHGAP1Q07960 439 aa17.62■□□□□ 0.41
CMTM3-212ENST00000566121 LAMC2Q13753 1193 aa17.62■□□□□ 0.41
CMTM3-212ENST00000566121 NBPF20Q3BBV1 942 aa17.62■□□□□ 0.41
CMTM3-212ENST00000566121 ARHGEF16Q5VV41 709 aa17.62■□□□□ 0.41
CMTM3-212ENST00000566121 CATIPQ7Z7H3 387 aa17.62■□□□□ 0.41
CMTM3-212ENST00000566121 VWCEQ96DN2 955 aa17.62■□□□□ 0.41
CMTM3-212ENST00000566121 PDCD2LQ9BRP1 358 aa17.62■□□□□ 0.41
CMTM3-212ENST00000566121 TTC28Q96AY4 2481 aa17.62■□□□□ 0.41
CMTM3-212ENST00000566121 CYTH3O43739 400 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 DHX16O60231 1041 aaKnown RBP17.61■□□□□ 0.41
CMTM3-212ENST00000566121 STAM2O75886 525 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 CASTP20810 708 aaKnown RBP17.61■□□□□ 0.41
CMTM3-212ENST00000566121 PTGS1P23219 599 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 DNAJB2P25686 324 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 LIFRP42702 1097 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 ANTXR2P58335 489 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 PSMC6P62333 389 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 RBL2Q08999 1139 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 SLC35G1Q2M3R5 365 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 TMEM87BQ96K49 555 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 SPZ1Q9BXG8 430 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 PPP1R12CQ9BZL4 782 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 WNT8AQ9H1J5 351 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 TRANK1O15050 2925 aa17.61■□□□□ 0.41
CMTM3-212ENST00000566121 CHD7Q9P2D1 2997 aa17.6■□□□□ 0.41
CMTM3-212ENST00000566121 EYSQ5T1H1 3165 aa17.6■□□□□ 0.41
CMTM3-212ENST00000566121 PPFIA4O75335 1185 aa17.6■□□□□ 0.41
CMTM3-212ENST00000566121 DDAH1O94760 285 aa17.6■□□□□ 0.41
CMTM3-212ENST00000566121 PARNO95453 639 aaKnown RBP17.6■□□□□ 0.41
CMTM3-212ENST00000566121 CFBP00751 764 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms