RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 FSCN1Q16658 493 aaKnown RBP22.04■■□□□ 1.12
TRADD-203ENST00000563348 RXRAP19793 462 aa22.03■■□□□ 1.12
TRADD-203ENST00000563348 HSPA4P34932 840 aa22.03■■□□□ 1.12
TRADD-203ENST00000563348 ARHGEF16Q5VV41 709 aa22.03■■□□□ 1.12
TRADD-203ENST00000563348 ANKRD33Q7Z3H0 272 aa22.03■■□□□ 1.12
TRADD-203ENST00000563348 SRBD1Q8N5C6 995 aaKnown RBP22.03■■□□□ 1.12
TRADD-203ENST00000563348 FANCBQ8NB91 859 aa22.03■■□□□ 1.12
TRADD-203ENST00000563348 SCFD2Q8WU76 684 aa22.03■■□□□ 1.12
TRADD-203ENST00000563348 VTI1AQ96AJ9 217 aa22.03■■□□□ 1.12
TRADD-203ENST00000563348 TOX2Q96NM4 488 aa22.03■■□□□ 1.12
TRADD-203ENST00000563348 PCDH10Q9P2E7 1040 aa22.03■■□□□ 1.12
TRADD-203ENST00000563348 MYH6P13533 1939 aa22.03■■□□□ 1.12
TRADD-203ENST00000563348 ZEB2O60315 1214 aa22.02■■□□□ 1.12
TRADD-203ENST00000563348 CABYRO75952 493 aa22.02■■□□□ 1.12
TRADD-203ENST00000563348 REC8O95072 547 aa22.02■■□□□ 1.12
TRADD-203ENST00000563348 PLEKHA8P1O95397 391 aa22.02■■□□□ 1.12
TRADD-203ENST00000563348 HMGB1P09429 215 aaKnown RBP22.02■■□□□ 1.12
TRADD-203ENST00000563348 CDK7P50613 346 aa22.02■■□□□ 1.12
TRADD-203ENST00000563348 FXR1P51114 621 aaKnown RBP eCLIP22.02■■□□□ 1.12
TRADD-203ENST00000563348 STXBP2Q15833 593 aa22.02■■□□□ 1.12
TRADD-203ENST00000563348 SYNE3Q6ZMZ3 975 aa22.02■■□□□ 1.12
TRADD-203ENST00000563348 PIBF1Q8WXW3 757 aa22.02■■□□□ 1.12
TRADD-203ENST00000563348 RRP36Q96EU6 259 aaKnown RBP22.02■■□□□ 1.12
TRADD-203ENST00000563348 PDLIM7Q9NR12 457 aa22.02■■□□□ 1.12
TRADD-203ENST00000563348 PXMP2Q9NR77 195 aa22.02■■□□□ 1.12
TRADD-203ENST00000563348 GCOM1H8Y6P7 765 aaPredicted RBP22.01■■□□□ 1.11
TRADD-203ENST00000563348 NKRFO15226 690 aaKnown RBP eCLIP22.01■■□□□ 1.11
TRADD-203ENST00000563348 PQBP1O60828 265 aaKnown RBP22.01■■□□□ 1.11
TRADD-203ENST00000563348 SLC34A2O95436 690 aa22.01■■□□□ 1.11
TRADD-203ENST00000563348 NR3C2P08235 984 aa22.01■■□□□ 1.11
TRADD-203ENST00000563348 POLR2MP0CAP2 368 aa22.01■■□□□ 1.11
TRADD-203ENST00000563348 MDM2Q00987 491 aaPredicted RBP22.01■■□□□ 1.11
TRADD-203ENST00000563348 TTLL4Q14679 1199 aa22.01■■□□□ 1.11
TRADD-203ENST00000563348 CXCL17Q6UXB2 119 aa22.01■■□□□ 1.11
TRADD-203ENST00000563348 SH3RF1Q7Z6J0 888 aa22.01■■□□□ 1.11
TRADD-203ENST00000563348 RAB11FIP4Q86YS3 637 aa22.01■■□□□ 1.11
TRADD-203ENST00000563348 TCEANC2Q96MN5 208 aa22.01■■□□□ 1.11
TRADD-203ENST00000563348 LBHD1Q9BQE6 289 aaPredicted RBP22.01■■□□□ 1.11
TRADD-203ENST00000563348 PRDM5Q9NQX1 630 aaPredicted RBP22.01■■□□□ 1.11
TRADD-203ENST00000563348 A0A0U1RQG5 324 aaPredicted RBP22■■□□□ 1.11
TRADD-203ENST00000563348 TRIM43BA6NCK2 446 aa22■■□□□ 1.11
TRADD-203ENST00000563348 DCDC2CA8MYV0 355 aa22■■□□□ 1.11
TRADD-203ENST00000563348 ARVCFO00192 962 aa22■■□□□ 1.11
TRADD-203ENST00000563348 EIF3JO75822 258 aaKnown RBP22■■□□□ 1.11
TRADD-203ENST00000563348 CLTBP09497 229 aa22■■□□□ 1.11
TRADD-203ENST00000563348 TXNP10599 105 aaKnown RBP22■■□□□ 1.11
TRADD-203ENST00000563348 EIF2AK2P19525 551 aaKnown RBP22■■□□□ 1.11
TRADD-203ENST00000563348 HOXA13P31271 388 aaPredicted RBP22■■□□□ 1.11
TRADD-203ENST00000563348 PPP2R5BQ15173 497 aa22■■□□□ 1.11
TRADD-203ENST00000563348 CMTR1Q8N1G2 835 aaKnown RBP22■■□□□ 1.11
TRADD-203ENST00000563348 TRIM43Q96BQ3 446 aaPredicted RBP22■■□□□ 1.11
TRADD-203ENST00000563348 UBE2OQ9C0C9 1292 aaKnown RBP22■■□□□ 1.11
TRADD-203ENST00000563348 SNX14Q9Y5W7 946 aa22■■□□□ 1.11
TRADD-203ENST00000563348 LRRC37A2A6NM11 1700 aa22■■□□□ 1.11
TRADD-203ENST00000563348 EPB41L2O43491 1005 aaKnown RBP21.99■■□□□ 1.11
TRADD-203ENST00000563348 CCDC62Q6P9F0 684 aa21.99■■□□□ 1.11
TRADD-203ENST00000563348 APOA5Q6Q788 366 aa21.99■■□□□ 1.11
TRADD-203ENST00000563348 TMTC3Q6ZXV5 915 aa21.99■■□□□ 1.11
TRADD-203ENST00000563348 MICU3Q86XE3 530 aa21.99■■□□□ 1.11
TRADD-203ENST00000563348 OR6J1Q8NGC5 347 aa21.99■■□□□ 1.11
TRADD-203ENST00000563348 SEC63Q9UGP8 760 aaKnown RBP21.99■■□□□ 1.11
TRADD-203ENST00000563348 BRPF3Q9ULD4 1205 aa21.99■■□□□ 1.11
TRADD-203ENST00000563348 KIAA0355O15063 1070 aa21.98■■□□□ 1.11
TRADD-203ENST00000563348 ARIH2O95376 493 aa21.98■■□□□ 1.11
TRADD-203ENST00000563348 FAAP100Q0VG06 881 aa21.98■■□□□ 1.11
TRADD-203ENST00000563348 SEPT14Q6ZU15 432 aa21.98■■□□□ 1.11
TRADD-203ENST00000563348 VSIG10LQ86VR7 867 aa21.98■■□□□ 1.11
TRADD-203ENST00000563348 SLC43A3Q8NBI5 491 aa21.98■■□□□ 1.11
TRADD-203ENST00000563348 COPS5Q92905 334 aa21.98■■□□□ 1.11
TRADD-203ENST00000563348 PDCD2LQ9BRP1 358 aa21.98■■□□□ 1.11
TRADD-203ENST00000563348 TMEM39AQ9NV64 488 aa21.98■■□□□ 1.11
TRADD-203ENST00000563348 MROH7Q68CQ1 1323 aa21.98■■□□□ 1.11
TRADD-203ENST00000563348 CPT1AP50416 773 aa21.97■■□□□ 1.11
TRADD-203ENST00000563348 FCHSD1Q86WN1 690 aa21.97■■□□□ 1.11
TRADD-203ENST00000563348 CCDC82Q8N4S0 544 aa21.97■■□□□ 1.11
TRADD-203ENST00000563348 JAKMIP1Q96N16 626 aaKnown RBP21.97■■□□□ 1.11
TRADD-203ENST00000563348 SEZ6LQ9BYH1 1024 aa21.97■■□□□ 1.11
TRADD-203ENST00000563348 POLR3EQ9NVU0 708 aa21.97■■□□□ 1.11
TRADD-203ENST00000563348 RBM28Q9NW13 759 aaKnown RBP21.97■■□□□ 1.11
TRADD-203ENST00000563348 A6NJR5 290 aa21.96■■□□□ 1.11
TRADD-203ENST00000563348 ZBTB43O43298 467 aa21.96■■□□□ 1.11
TRADD-203ENST00000563348 CPA1P15085 419 aa21.96■■□□□ 1.11
TRADD-203ENST00000563348 ITGA7Q13683 1181 aa21.96■■□□□ 1.11
TRADD-203ENST00000563348 BRDTQ58F21 947 aaPredicted RBP21.96■■□□□ 1.11
TRADD-203ENST00000563348 TDHQ8IZJ6 230 aa21.96■■□□□ 1.11
TRADD-203ENST00000563348 BADQ92934 168 aa21.96■■□□□ 1.11
TRADD-203ENST00000563348 GRIN2DO15399 1336 aa21.96■■□□□ 1.11
TRADD-203ENST00000563348 MYCLP12524 364 aaPredicted RBP21.95■■□□□ 1.1
TRADD-203ENST00000563348 ITGB8P26012 769 aa21.95■■□□□ 1.1
TRADD-203ENST00000563348 PGM5Q15124 567 aa21.95■■□□□ 1.1
TRADD-203ENST00000563348 LY6KQ17RY6 165 aa21.95■■□□□ 1.1
TRADD-203ENST00000563348 BLOC1S2Q6QNY1 142 aa21.95■■□□□ 1.1
TRADD-203ENST00000563348 USP26Q9BXU7 913 aa21.95■■□□□ 1.1
TRADD-203ENST00000563348 DDX41Q9UJV9 622 aaKnown RBP21.95■■□□□ 1.1
TRADD-203ENST00000563348 LAMA3Q16787 3333 aa21.95■■□□□ 1.1
TRADD-203ENST00000563348 KLF18A0A0U1RQI7 1052 aa21.94■■□□□ 1.1
TRADD-203ENST00000563348 hCG_1642624A0A1W2PR95 340 aa21.94■■□□□ 1.1
TRADD-203ENST00000563348 PIK3CDO00329 1044 aa21.94■■□□□ 1.1
TRADD-203ENST00000563348 KPNA6O60684 536 aa21.94■■□□□ 1.1
TRADD-203ENST00000563348 GH1P01241 217 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms