RNA–Protein interactions for RNA: ENST00000562492.5

IRF8-202, Transcript of interferon regulatory factor 8, humanhuman

TSL 3 BASIC

Gene IRF8, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-202ENST00000562492 CXCL17Q6UXB2 119 aa20.37■□□□□ 0.85
IRF8-202ENST00000562492 TRIM43Q96BQ3 446 aaPredicted RBP20.37■□□□□ 0.85
IRF8-202ENST00000562492 RIOX1Q9H6W3 641 aa20.37■□□□□ 0.85
IRF8-202ENST00000562492 TAF6LQ9Y6J9 622 aa20.37■□□□□ 0.85
IRF8-202ENST00000562492 DDX49Q9Y6V7 483 aaKnown RBP20.37■□□□□ 0.85
IRF8-202ENST00000562492 RANBP2P49792 3224 aaKnown RBP20.36■□□□□ 0.85
IRF8-202ENST00000562492 PNMA6FA0A0J9YX94 578 aa20.36■□□□□ 0.85
IRF8-202ENST00000562492 CTAGE5O15320 804 aa20.36■□□□□ 0.85
IRF8-202ENST00000562492 TXNP10599 105 aaKnown RBP20.36■□□□□ 0.85
IRF8-202ENST00000562492 CDK7P50613 346 aa20.36■□□□□ 0.85
IRF8-202ENST00000562492 ANTXR2P58335 489 aa20.36■□□□□ 0.85
IRF8-202ENST00000562492 FAAP100Q0VG06 881 aa20.36■□□□□ 0.85
IRF8-202ENST00000562492 SYNE3Q6ZMZ3 975 aa20.36■□□□□ 0.85
IRF8-202ENST00000562492 SH3RF1Q7Z6J0 888 aa20.36■□□□□ 0.85
IRF8-202ENST00000562492 ZNF654Q8IZM8 581 aa20.36■□□□□ 0.85
IRF8-202ENST00000562492 SEC63Q9UGP8 760 aaKnown RBP20.36■□□□□ 0.85
IRF8-202ENST00000562492 LIFRP42702 1097 aa20.35■□□□□ 0.85
IRF8-202ENST00000562492 IRX5P78411 483 aaPredicted RBP20.35■□□□□ 0.85
IRF8-202ENST00000562492 FPGSQ05932 587 aa20.35■□□□□ 0.85
IRF8-202ENST00000562492 ITGA7Q13683 1181 aa20.35■□□□□ 0.85
IRF8-202ENST00000562492 KRT32Q14532 448 aa20.35■□□□□ 0.85
IRF8-202ENST00000562492 NECTIN1Q15223 517 aa20.35■□□□□ 0.85
IRF8-202ENST00000562492 RRP36Q96EU6 259 aaKnown RBP20.35■□□□□ 0.85
IRF8-202ENST00000562492 TAAR1Q96RJ0 339 aa20.35■□□□□ 0.85
IRF8-202ENST00000562492 PIGSQ96S52 555 aa20.35■□□□□ 0.85
IRF8-202ENST00000562492 LY9Q9HBG7 655 aa20.35■□□□□ 0.85
IRF8-202ENST00000562492 DNAH12Q6ZR08 3092 aa20.35■□□□□ 0.85
IRF8-202ENST00000562492 LTBP2Q14767 1821 aa20.34■□□□□ 0.85
IRF8-202ENST00000562492 GCOM1H8Y6P7 765 aaPredicted RBP20.34■□□□□ 0.85
IRF8-202ENST00000562492 EIF3JO75822 258 aaKnown RBP20.34■□□□□ 0.85
IRF8-202ENST00000562492 POLR2MP0CAP2 368 aa20.34■□□□□ 0.85
IRF8-202ENST00000562492 SMARCA1P28370 1054 aa20.34■□□□□ 0.85
IRF8-202ENST00000562492 HSD17B4P51659 736 aa20.34■□□□□ 0.85
IRF8-202ENST00000562492 GHRHRQ02643 423 aa20.34■□□□□ 0.85
IRF8-202ENST00000562492 TBC1D5Q92609 795 aa20.34■□□□□ 0.85
IRF8-202ENST00000562492 SLC12A7Q9Y666 1083 aa20.34■□□□□ 0.85
IRF8-202ENST00000562492 SOX1O00570 391 aaPredicted RBP20.33■□□□□ 0.85
IRF8-202ENST00000562492 SH2B2O14492 632 aaPredicted RBP20.33■□□□□ 0.85
IRF8-202ENST00000562492 TIMP1P01033 207 aa20.33■□□□□ 0.85
IRF8-202ENST00000562492 MYL3P08590 195 aa20.33■□□□□ 0.85
IRF8-202ENST00000562492 EIF2AK2P19525 551 aaKnown RBP20.33■□□□□ 0.85
IRF8-202ENST00000562492 SEPT14Q6ZU15 432 aa20.33■□□□□ 0.85
IRF8-202ENST00000562492 FAM126BQ8IXS8 530 aa20.33■□□□□ 0.85
IRF8-202ENST00000562492 TMEM199Q8N511 208 aa20.33■□□□□ 0.85
IRF8-202ENST00000562492 LRCH3Q96II8 777 aa20.33■□□□□ 0.85
IRF8-202ENST00000562492 MTG1Q9BT17 334 aaPredicted RBP20.33■□□□□ 0.85
IRF8-202ENST00000562492 SPZ1Q9BXG8 430 aa20.33■□□□□ 0.85
IRF8-202ENST00000562492 SENP2Q9HC62 589 aa20.33■□□□□ 0.85
IRF8-202ENST00000562492 PXMP2Q9NR77 195 aa20.33■□□□□ 0.85
IRF8-202ENST00000562492 TBX21Q9UL17 535 aa20.33■□□□□ 0.85
IRF8-202ENST00000562492 GH1P01241 217 aa20.32■□□□□ 0.84
IRF8-202ENST00000562492 NR3C2P08235 984 aa20.32■□□□□ 0.84
IRF8-202ENST00000562492 SUPT20HL2P0C7V6 817 aa20.32■□□□□ 0.84
IRF8-202ENST00000562492 PPIGQ13427 754 aaKnown RBP eCLIP20.32■□□□□ 0.84
IRF8-202ENST00000562492 KCNV1Q6PIU1 500 aa20.32■□□□□ 0.84
IRF8-202ENST00000562492 SLC43A3Q8NBI5 491 aa20.32■□□□□ 0.84
IRF8-202ENST00000562492 CUL5Q93034 780 aa20.32■□□□□ 0.84
IRF8-202ENST00000562492 NEK1Q96PY6 1258 aa20.32■□□□□ 0.84
IRF8-202ENST00000562492 HMGB1P09429 215 aaKnown RBP20.31■□□□□ 0.84
IRF8-202ENST00000562492 MFSD5Q6N075 450 aa20.31■□□□□ 0.84
IRF8-202ENST00000562492 COL20A1Q9P218 1284 aa20.31■□□□□ 0.84
IRF8-202ENST00000562492 MRVI1Q9Y6F6 885 aa20.31■□□□□ 0.84
IRF8-202ENST00000562492 A6NJR5 290 aa20.3■□□□□ 0.84
IRF8-202ENST00000562492 CYTH3O43739 400 aa20.3■□□□□ 0.84
IRF8-202ENST00000562492 PPP1R11O60927 126 aaPredicted RBP20.3■□□□□ 0.84
IRF8-202ENST00000562492 MYCLP12524 364 aaPredicted RBP20.3■□□□□ 0.84
IRF8-202ENST00000562492 CCND2P30279 289 aa20.3■□□□□ 0.84
IRF8-202ENST00000562492 PURAQ00577 322 aaKnown RBP20.3■□□□□ 0.84
IRF8-202ENST00000562492 SHHQ15465 462 aa20.3■□□□□ 0.84
IRF8-202ENST00000562492 PIBF1Q8WXW3 757 aa20.3■□□□□ 0.84
IRF8-202ENST00000562492 MYL10Q9BUA6 226 aa20.3■□□□□ 0.84
IRF8-202ENST00000562492 CD4P01730 458 aa20.29■□□□□ 0.84
IRF8-202ENST00000562492 HOXA13P31271 388 aaPredicted RBP20.29■□□□□ 0.84
IRF8-202ENST00000562492 FGD1P98174 961 aa20.29■□□□□ 0.84
IRF8-202ENST00000562492 TMEM63BQ5T3F8 832 aa20.29■□□□□ 0.84
IRF8-202ENST00000562492 FCHSD1Q86WN1 690 aa20.29■□□□□ 0.84
IRF8-202ENST00000562492 RNPC3Q96LT9 517 aaKnown RBP20.29■□□□□ 0.84
IRF8-202ENST00000562492 PDCD2LQ9BRP1 358 aa20.29■□□□□ 0.84
IRF8-202ENST00000562492 HIPK3Q9H422 1215 aa20.29■□□□□ 0.84
IRF8-202ENST00000562492 BAZ2BQ9UIF8 2168 aaKnown RBP20.28■□□□□ 0.84
IRF8-202ENST00000562492 OPLAHO14841 1288 aa20.28■□□□□ 0.84
IRF8-202ENST00000562492 REC8O95072 547 aa20.28■□□□□ 0.84
IRF8-202ENST00000562492 CASTP20810 708 aaKnown RBP20.28■□□□□ 0.84
IRF8-202ENST00000562492 PTGS1P23219 599 aa20.28■□□□□ 0.84
IRF8-202ENST00000562492 ITGB8P26012 769 aa20.28■□□□□ 0.84
IRF8-202ENST00000562492 PSMC6P62333 389 aa20.28■□□□□ 0.84
IRF8-202ENST00000562492 TSGA10IPQ3SY00 556 aa20.28■□□□□ 0.84
IRF8-202ENST00000562492 FAM47CQ5HY64 1035 aa20.28■□□□□ 0.84
IRF8-202ENST00000562492 CCDC62Q6P9F0 684 aa20.28■□□□□ 0.84
IRF8-202ENST00000562492 DHX32Q7L7V1 743 aaKnown RBP20.28■□□□□ 0.84
IRF8-202ENST00000562492 SGMS1Q86VZ5 419 aa20.28■□□□□ 0.84
IRF8-202ENST00000562492 DEFB123Q8N688 67 aa20.28■□□□□ 0.84
IRF8-202ENST00000562492 SMARCC2Q8TAQ2 1214 aa20.28■□□□□ 0.84
IRF8-202ENST00000562492 PPP1R12CQ9BZL4 782 aa20.28■□□□□ 0.84
IRF8-202ENST00000562492 MTIF3Q9H2K0 278 aaKnown RBP20.28■□□□□ 0.84
IRF8-202ENST00000562492 RBM28Q9NW13 759 aaKnown RBP20.28■□□□□ 0.84
IRF8-202ENST00000562492 STAM2O75886 525 aa20.27■□□□□ 0.84
IRF8-202ENST00000562492 PTPN11Q06124 597 aaPredicted RBP20.27■□□□□ 0.84
IRF8-202ENST00000562492 LAMC2Q13753 1193 aa20.27■□□□□ 0.84
IRF8-202ENST00000562492 PGM5Q15124 567 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms