RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 KATNBL1Q9H079 304 aa6.49□□□□□ -1.37
LINC01963-201ENST00000562038 LIMCH1Q9UPQ0 1083 aa6.49□□□□□ -1.37
LINC01963-201ENST00000562038 FAM196BA6NMK8 535 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 KLRF2D3W0D1 207 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 TGFB3P10600 412 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 MUTP22033 750 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 UBXN2AP68543 259 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 RDM1Q8NG50 284 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 SMCR8Q8TEV9 937 aaPredicted RBP6.48□□□□□ -1.37
LINC01963-201ENST00000562038 KCNN1Q92952 543 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 ATG4CQ96DT6 458 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 CDHR1Q96JP9 859 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 SENP7Q9BQF6 1050 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 SIP14410 1827 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 TMEM232C9JQI7 657 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 CYBAP13498 195 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 TRAPPC10P48553 1259 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 METAP2P50579 478 aaKnown RBP eCLIP6.48□□□□□ -1.37
LINC01963-201ENST00000562038 ADCK5Q3MIX3 580 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 Q6ZUG5 572 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 SESTD1Q86VW0 696 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 ADAMTS19Q8TE59 1207 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 SPATA32Q96LK8 384 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 MMP19Q99542 508 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 CYP39A1Q9NYL5 469 aa6.48□□□□□ -1.37
LINC01963-201ENST00000562038 KIAA1522Q9P206 1035 aaPredicted RBP6.48□□□□□ -1.37
LINC01963-201ENST00000562038 TBX3O15119 743 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 CABYRO75952 493 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 FARP2O94887 1054 aaPredicted RBP6.47□□□□□ -1.37
LINC01963-201ENST00000562038 GCFC2P16383 781 aaKnown RBP6.47□□□□□ -1.37
LINC01963-201ENST00000562038 CASTP20810 708 aaKnown RBP6.47□□□□□ -1.37
LINC01963-201ENST00000562038 GNA11P29992 359 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 HAND2P61296 217 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 SNX17Q15036 470 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 SLC9C1Q4G0N8 1177 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 MFSD14CQ5VZR4 134 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 PCNX4Q63HM2 1172 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 DLK2Q6UY11 383 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 VTI1AQ96AJ9 217 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 GPRASP2Q96D09 838 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 FGD4Q96M96 766 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 WDR70Q9NW82 654 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 THEGQ9P2T0 379 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 SEC63Q9UGP8 760 aaKnown RBP6.47□□□□□ -1.37
LINC01963-201ENST00000562038 STX8Q9UNK0 236 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 GOLGA8AA7E2F4 631 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 GOLGA8BA8MQT2 603 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 STXBP3O00186 592 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 SGPL1O95470 568 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 RBL2Q08999 1139 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 KCTD2Q14681 263 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 QRICH1Q2TAL8 776 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 IQSEC1Q6DN90 963 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 LRRC47Q8N1G4 583 aaKnown RBP6.47□□□□□ -1.37
LINC01963-201ENST00000562038 MICAL1Q8TDZ2 1067 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 TXNRD2Q9NNW7 524 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 OGDHLQ9ULD0 1010 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 MYH7BA7E2Y1 1941 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 SCN10AQ9Y5Y9 1956 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 CAND2O75155 1236 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 PTMAP06454 111 aaKnown RBP6.47□□□□□ -1.37
LINC01963-201ENST00000562038 SCG2P13521 617 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 XBP1P17861 261 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 SREBF1P36956 1147 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 USP11P51784 963 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 ATL3Q6DD88 541 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 TRIM22Q8IYM9 498 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 MAML3Q96JK9 1138 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 RNF146Q9NTX7 359 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 RAPGEFL1Q9UHV5 662 aa6.47□□□□□ -1.37
LINC01963-201ENST00000562038 KLF18A0A0U1RQI7 1052 aa6.46□□□□□ -1.37
LINC01963-201ENST00000562038 CYTH3O43739 400 aa6.46□□□□□ -1.37
LINC01963-201ENST00000562038 PRDM1O75626 825 aa6.46□□□□□ -1.37
LINC01963-201ENST00000562038 COL6A1P12109 1028 aa6.46□□□□□ -1.37
LINC01963-201ENST00000562038 ERCC3P19447 782 aa6.46□□□□□ -1.37
LINC01963-201ENST00000562038 SLC35G1Q2M3R5 365 aa6.46□□□□□ -1.37
LINC01963-201ENST00000562038 SRBD1Q8N5C6 995 aaKnown RBP6.46□□□□□ -1.37
LINC01963-201ENST00000562038 UHRF1Q96T88 793 aaPredicted RBP6.46□□□□□ -1.37
LINC01963-201ENST00000562038 ABHD16BQ9H3Z7 469 aa6.46□□□□□ -1.37
LINC01963-201ENST00000562038 IVNS1ABPQ9Y6Y0 642 aa6.46□□□□□ -1.37
LINC01963-201ENST00000562038 SMIM22K7EJ46 135 aa6.46□□□□□ -1.38
LINC01963-201ENST00000562038 TNPO2O14787 897 aaKnown RBP6.46□□□□□ -1.38
LINC01963-201ENST00000562038 TPD52L2O43399 206 aaKnown RBP6.46□□□□□ -1.38
LINC01963-201ENST00000562038 PSMC4P43686 418 aa6.46□□□□□ -1.38
LINC01963-201ENST00000562038 SHROOM1Q2M3G4 852 aaPredicted RBP6.46□□□□□ -1.38
LINC01963-201ENST00000562038 Q4G0T1 1027 aa6.46□□□□□ -1.38
LINC01963-201ENST00000562038 SNRNP48Q6IEG0 339 aaKnown RBP6.46□□□□□ -1.38
LINC01963-201ENST00000562038 DNAJC14Q6Y2X3 702 aaPredicted RBP6.46□□□□□ -1.38
LINC01963-201ENST00000562038 NSUN6Q8TEA1 469 aaKnown RBP6.46□□□□□ -1.38
LINC01963-201ENST00000562038 CUL5Q93034 780 aa6.46□□□□□ -1.38
LINC01963-201ENST00000562038 ZNF830Q96NB3 372 aaPredicted RBP6.46□□□□□ -1.38
LINC01963-201ENST00000562038 TRERF1Q96PN7 1200 aa6.46□□□□□ -1.38
LINC01963-201ENST00000562038 PHF20Q9BVI0 1012 aa6.46□□□□□ -1.38
LINC01963-201ENST00000562038 CCPG1Q9ULG6 757 aa6.46□□□□□ -1.38
LINC01963-201ENST00000562038 PTCH2Q9Y6C5 1203 aa6.46□□□□□ -1.38
LINC01963-201ENST00000562038 TAF6LQ9Y6J9 622 aa6.46□□□□□ -1.38
LINC01963-201ENST00000562038 EMSYQ7Z589 1322 aa6.46□□□□□ -1.38
LINC01963-201ENST00000562038 ZMYM2Q9UBW7 1377 aa6.46□□□□□ -1.38
LINC01963-201ENST00000562038 LAD1O00515 517 aa6.45□□□□□ -1.38
LINC01963-201ENST00000562038 OPLAHO14841 1288 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms