RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 GNASQ5JWF2 1037 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 SUGP1Q8IWZ8 645 aaKnown RBP6.54□□□□□ -1.36
HERC1-213ENST00000561359 PBXIP1Q96AQ6 731 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 SRCIN1Q9C0H9 1055 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 DHX36Q9H2U1 1008 aaKnown RBP6.54□□□□□ -1.36
HERC1-213ENST00000561359 MROH8Q9H579 483 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 DNAJC18Q9H819 358 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 HOXC10Q9NYD6 342 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 LMCD1Q9NZU5 365 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 FAM184BQ9ULE4 1060 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 FAM50BQ9Y247 325 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 ATRXP46100 2492 aa6.54□□□□□ -1.36
HERC1-213ENST00000561359 VPS13AQ96RL7 3174 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 MYH2Q9UKX2 1941 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 H3BM21 787 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 H3BQ06 376 aaPredicted RBP6.53□□□□□ -1.36
HERC1-213ENST00000561359 EYA2O00167 538 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 DUSP11O75319 330 aaKnown RBP6.53□□□□□ -1.36
HERC1-213ENST00000561359 CD4P01730 458 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 PGK2P07205 417 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 ACTN1P12814 892 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 ADD1P35611 737 aaKnown RBP6.53□□□□□ -1.36
HERC1-213ENST00000561359 GSTO1P78417 241 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 RASGRF1Q13972 1273 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 COG2Q14746 738 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 PKN1Q16512 942 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 CCSAPQ6IQ19 270 aaPredicted RBP6.53□□□□□ -1.36
HERC1-213ENST00000561359 EP400NLQ6ZTU2 488 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 SPRED2Q7Z698 418 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 DEFB128Q7Z7B8 93 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 FOXP4Q8IVH2 680 aaPredicted RBP6.53□□□□□ -1.36
HERC1-213ENST00000561359 ANKRD44Q8N8A2 993 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 SCLYQ96I15 445 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 SLC9A7Q96T83 725 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 MMP19Q99542 508 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 NOL10Q9BSC4 688 aaKnown RBP6.53□□□□□ -1.36
HERC1-213ENST00000561359 NOC4LQ9BVI4 516 aaKnown RBP6.53□□□□□ -1.36
HERC1-213ENST00000561359 TANGO6Q9C0B7 1094 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 KIAA1683Q9H0B3 1180 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 IRF2BPLQ9H1B7 796 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 WNT8AQ9H1J5 351 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 CEP126Q9P2H0 1117 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 MUTYHQ9UIF7 546 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 ZHX1Q9UKY1 873 aaPredicted RBP6.53□□□□□ -1.36
HERC1-213ENST00000561359 MTUS1Q9ULD2 1270 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 ROBO3Q96MS0 1386 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 A0A0G2JMZ2 1700 aa6.53□□□□□ -1.36
HERC1-213ENST00000561359 GVINP1Q7Z2Y8 2422 aa6.52□□□□□ -1.36
HERC1-213ENST00000561359 CFAP47Q6ZTR5 3102 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 ACACBO00763 2458 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 GBF1Q92538 1859 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 LILRA1O75019 489 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 HLA-DOAP06340 250 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 CST5P28325 142 aaPredicted RBP6.52□□□□□ -1.37
HERC1-213ENST00000561359 IRS1P35568 1242 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 ABL2P42684 1182 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 PTGIRP43119 386 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 CTSOP43234 321 aaPredicted RBP6.52□□□□□ -1.37
HERC1-213ENST00000561359 INSM1Q01101 510 aaPredicted RBP6.52□□□□□ -1.37
HERC1-213ENST00000561359 RALBP1Q15311 655 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 CCDC102BQ68D86 513 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 ATF7IPQ6VMQ6 1270 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 HERC6Q8IVU3 1022 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 MAPKAPK5Q8IW41 473 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 ADHFE1Q8IWW8 467 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 MB21D1Q8N884 522 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 CCER1Q8TC90 406 aaPredicted RBP6.52□□□□□ -1.37
HERC1-213ENST00000561359 PHOSPHO2Q8TCD6 241 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 ACER1Q8TDN7 264 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 SH3RF3Q8TEJ3 882 aaPredicted RBP6.52□□□□□ -1.37
HERC1-213ENST00000561359 SIL1Q9H173 461 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 TRPV6Q9H1D0 765 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 PRKAG3Q9UGI9 489 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 PALD1Q9ULE6 856 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 PCDHB11Q9Y5F2 797 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 TECTAO75443 2155 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 ATAD5Q96QE3 1844 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 MYO15AQ9UKN7 3530 aa6.52□□□□□ -1.37
HERC1-213ENST00000561359 TMEM221A6NGB7 291 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 M0R296 226 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 WIPF1O43516 503 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 SLC25A27O95847 323 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 PFKMP08237 780 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 ADORA1P30542 326 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 GMPRP36959 345 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 PTSQ03393 145 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 KCTD2Q14681 263 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 HERC4Q5GLZ8 1057 aaPredicted RBP6.51□□□□□ -1.37
HERC1-213ENST00000561359 ASCL5Q7RTU5 278 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 BMP8AQ7Z5Y6 402 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 METTL16Q86W50 562 aaKnown RBP6.51□□□□□ -1.37
HERC1-213ENST00000561359 ZNF384Q8TF68 577 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 TGFBRAP1Q8WUH2 860 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 EDAQ92838 391 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 GDPD2Q9HCC8 539 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 RAI14Q9P0K7 980 aa6.51□□□□□ -1.37
HERC1-213ENST00000561359 SAP30BPQ9UHR5 308 aaKnown RBP6.51□□□□□ -1.37
HERC1-213ENST00000561359 DIS3Q9Y2L1 958 aaKnown RBP6.51□□□□□ -1.37
HERC1-213ENST00000561359 MYH13Q9UKX3 1938 aa6.5□□□□□ -1.37
HERC1-213ENST00000561359 MED19A0JLT2 244 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms