RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 MKL1Q969V6 931 aa16.24■□□□□ 0.19
RABGGTA-212ENST00000559974 CCDC47Q96A33 483 aaKnown RBP16.24■□□□□ 0.19
RABGGTA-212ENST00000559974 L3MBTL3Q96JM7 780 aaPredicted RBP16.24■□□□□ 0.19
RABGGTA-212ENST00000559974 C7orf25Q9BPX7 421 aa16.24■□□□□ 0.19
RABGGTA-212ENST00000559974 TRIM9Q9C026 710 aa16.24■□□□□ 0.19
RABGGTA-212ENST00000559974 L2HGDHQ9H9P8 463 aa16.24■□□□□ 0.19
RABGGTA-212ENST00000559974 USP17L10C9JJH3 530 aa16.23■□□□□ 0.19
RABGGTA-212ENST00000559974 PSMA7O14818 248 aa16.23■□□□□ 0.19
RABGGTA-212ENST00000559974 SLC37A4O43826 429 aa16.23■□□□□ 0.19
RABGGTA-212ENST00000559974 EDIL3O43854 480 aa16.23■□□□□ 0.19
RABGGTA-212ENST00000559974 TNNI2P48788 182 aa16.23■□□□□ 0.19
RABGGTA-212ENST00000559974 AMPD3Q01432 767 aa16.23■□□□□ 0.19
RABGGTA-212ENST00000559974 CERKLQ49MI3 558 aaPredicted RBP16.23■□□□□ 0.19
RABGGTA-212ENST00000559974 TRIM65Q6PJ69 517 aa16.23■□□□□ 0.19
RABGGTA-212ENST00000559974 NAA15Q9BXJ9 866 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-212ENST00000559974 KANSL2Q9H9L4 492 aa16.23■□□□□ 0.19
RABGGTA-212ENST00000559974 NMRK2Q9NPI5 230 aa16.23■□□□□ 0.19
RABGGTA-212ENST00000559974 NYAP2Q9P242 653 aa16.23■□□□□ 0.19
RABGGTA-212ENST00000559974 ZC3H4Q9UPT8 1303 aaKnown RBP16.23■□□□□ 0.19
RABGGTA-212ENST00000559974 TRIM49BA6NDI0 452 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 FAM196BA6NMK8 535 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 MFAP3LO75121 409 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 MRPL12P52815 198 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 UBE2SQ16763 222 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 PPP4R3AQ6IN85 833 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 TOGARAM2Q6ZUX3 1019 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 SH3BP5LQ7L8J4 393 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 ZSCAN29Q8IWY8 852 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 DCAF4Q8WV16 495 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 TRIM34Q9BYJ4 488 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 GTPBP4Q9BZE4 634 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 RAB34Q9BZG1 259 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 VPS16Q9H269 839 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 TAB2Q9NYJ8 693 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 ZNF70Q9UC06 446 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 LRWD1Q9UFC0 647 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 ZNF215Q9UL58 517 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 TCP10L2B9ZVM9 353 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 SLU7O95391 586 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 TPM1P09493 284 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 EEF2P13639 858 aaKnown RBP16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 TATDN1Q6P1N9 297 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 CNGA4Q8IV77 575 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 MTMR14Q8NCE2 650 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 CCDC51Q96ER9 411 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 ERO1AQ96HE7 468 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 DHTKD1Q96HY7 919 aaPredicted RBP16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 RRAGCQ9HB90 399 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 VEZTQ9HBM0 779 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 EXOC1Q9NV70 894 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 DNAI1Q9UI46 699 aa16.22■□□□□ 0.19
RABGGTA-212ENST00000559974 SCN4AP35499 1836 aa16.21■□□□□ 0.19
RABGGTA-212ENST00000559974 GYPCP04921 128 aa16.21■□□□□ 0.19
RABGGTA-212ENST00000559974 EEF1GP26641 437 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-212ENST00000559974 CASP14P31944 242 aa16.21■□□□□ 0.19
RABGGTA-212ENST00000559974 PMS1P54277 932 aaKnown RBP16.21■□□□□ 0.19
RABGGTA-212ENST00000559974 ASIC1P78348 528 aa16.21■□□□□ 0.19
RABGGTA-212ENST00000559974 PDE4DQ08499 809 aa16.21■□□□□ 0.19
RABGGTA-212ENST00000559974 PDIA5Q14554 519 aa16.21■□□□□ 0.19
RABGGTA-212ENST00000559974 IRF2BP1Q8IU81 584 aa16.21■□□□□ 0.19
RABGGTA-212ENST00000559974 CPLX3Q8WVH0 158 aa16.21■□□□□ 0.19
RABGGTA-212ENST00000559974 THAP9Q9H5L6 903 aa16.21■□□□□ 0.19
RABGGTA-212ENST00000559974 PSTPIP2Q9H939 334 aa16.21■□□□□ 0.19
RABGGTA-212ENST00000559974 STK17AQ9UEE5 414 aa16.21■□□□□ 0.19
RABGGTA-212ENST00000559974 CNTNAP1P78357 1384 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 PPP1R2P41236 205 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 SLC1A4P43007 532 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 GRB10Q13322 594 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 TRIM14Q14142 442 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 SHROOM1Q2M3G4 852 aaPredicted RBP16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 SPDYE2Q495Y8 402 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 SLFN13Q68D06 897 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 PDCL2Q8N4E4 241 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 NOC3LQ8WTT2 800 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 TRIM47Q96LD4 638 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 GLT8D2Q9H1C3 349 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 HACL1Q9UJ83 578 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 ATRNL1Q5VV63 1379 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 SOWAHDA6NJG2 315 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 EPHX2P34913 555 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 QRICH1Q2TAL8 776 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 PRAMEF18Q5VWM3 479 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 TTI2Q6NXR4 508 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 TMEM179Q6ZVK1 233 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 SV2BQ7L1I2 683 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 CREBRFQ8IUR6 639 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 CDK5RAP3Q96JB5 506 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 PNMA5Q96PV4 448 aa16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 TAF1DQ9H5J8 278 aaPredicted RBP16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 ADARB2Q9NS39 739 aaKnown RBP16.2■□□□□ 0.18
RABGGTA-212ENST00000559974 COL2A1P02458 1487 aaPredicted RBP16.19■□□□□ 0.18
RABGGTA-212ENST00000559974 RAD21O60216 631 aa16.19■□□□□ 0.18
RABGGTA-212ENST00000559974 GCFC2P16383 781 aaKnown RBP16.19■□□□□ 0.18
RABGGTA-212ENST00000559974 FECHP22830 423 aa16.19■□□□□ 0.18
RABGGTA-212ENST00000559974 FXR1P51114 621 aaKnown RBP eCLIP16.19■□□□□ 0.18
RABGGTA-212ENST00000559974 ICA1Q05084 483 aa16.19■□□□□ 0.18
RABGGTA-212ENST00000559974 NAA30Q147X3 362 aaPredicted RBP16.19■□□□□ 0.18
RABGGTA-212ENST00000559974 SEPT2Q15019 361 aa16.19■□□□□ 0.18
RABGGTA-212ENST00000559974 ANGEL2Q5VTE6 544 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms