RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 SLC30A10Q6XR72 485 aa18.88■□□□□ 0.61
TPM1-219ENST00000559397 RNF207Q6ZRF8 634 aa18.88■□□□□ 0.61
TPM1-219ENST00000559397 PLEKHH3Q7Z736 793 aa18.88■□□□□ 0.61
TPM1-219ENST00000559397 CCAR1Q8IX12 1150 aaKnown RBP18.88■□□□□ 0.61
TPM1-219ENST00000559397 BLIDQ8IZY5 108 aa18.88■□□□□ 0.61
TPM1-219ENST00000559397 OXER1Q8TDS5 423 aa18.88■□□□□ 0.61
TPM1-219ENST00000559397 MMP19Q99542 508 aa18.88■□□□□ 0.61
TPM1-219ENST00000559397 MAP3K20Q9NYL2 800 aaKnown RBP18.88■□□□□ 0.61
TPM1-219ENST00000559397 CYP39A1Q9NYL5 469 aa18.88■□□□□ 0.61
TPM1-219ENST00000559397 DOCK3Q8IZD9 2030 aa18.87■□□□□ 0.61
TPM1-219ENST00000559397 LCTP09848 1927 aa18.87■□□□□ 0.61
TPM1-219ENST00000559397 FCER1AP12319 257 aa18.87■□□□□ 0.61
TPM1-219ENST00000559397 PTPREP23469 700 aa18.87■□□□□ 0.61
TPM1-219ENST00000559397 HOXA13P31271 388 aaPredicted RBP18.87■□□□□ 0.61
TPM1-219ENST00000559397 CAP1Q01518 475 aa18.87■□□□□ 0.61
TPM1-219ENST00000559397 ABRAQ8N0Z2 381 aa18.87■□□□□ 0.61
TPM1-219ENST00000559397 ANKRD35Q8N283 1001 aa18.87■□□□□ 0.61
TPM1-219ENST00000559397 BICD2Q8TD16 824 aa18.87■□□□□ 0.61
TPM1-219ENST00000559397 TSKSQ9UJT2 592 aa18.87■□□□□ 0.61
TPM1-219ENST00000559397 STRNO43815 780 aa18.86■□□□□ 0.61
TPM1-219ENST00000559397 DEKP35659 375 aaKnown RBP18.86■□□□□ 0.61
TPM1-219ENST00000559397 KRT2P35908 639 aa18.86■□□□□ 0.61
TPM1-219ENST00000559397 GRB14Q14449 540 aa18.86■□□□□ 0.61
TPM1-219ENST00000559397 KCNG4Q8TDN1 519 aa18.86■□□□□ 0.61
TPM1-219ENST00000559397 SYTL5Q8TDW5 730 aaPredicted RBP18.86■□□□□ 0.61
TPM1-219ENST00000559397 TNFRSF25Q93038 417 aa18.86■□□□□ 0.61
TPM1-219ENST00000559397 ARHGAP39Q9C0H5 1083 aa18.86■□□□□ 0.61
TPM1-219ENST00000559397 COL20A1Q9P218 1284 aa18.86■□□□□ 0.61
TPM1-219ENST00000559397 BIN2Q9UBW5 565 aaPredicted RBP18.86■□□□□ 0.61
TPM1-219ENST00000559397 PCDHA6Q9UN73 950 aa18.86■□□□□ 0.61
TPM1-219ENST00000559397 PCDHA8Q9Y5H6 950 aa18.86■□□□□ 0.61
TPM1-219ENST00000559397 PFASO15067 1338 aa18.86■□□□□ 0.61
TPM1-219ENST00000559397 ZNF236Q9UL36 1845 aa18.86■□□□□ 0.61
TPM1-219ENST00000559397 GOLGA6L4A6NEF3 574 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 ECM2O94769 699 aaPredicted RBP18.85■□□□□ 0.61
TPM1-219ENST00000559397 NR5A1Q13285 461 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 KCTD2Q14681 263 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 CCDC183Q5T5S1 534 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 REXO1Q8N1G1 1221 aaKnown RBP18.85■□□□□ 0.61
TPM1-219ENST00000559397 RASGRP4Q8TDF6 673 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 TMEM260Q9NX78 707 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 DNAJC25-GNG10A0A024R161 153 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 LIG1P18858 919 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 PSMC4P43686 418 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 TOB1P50616 345 aaPredicted RBP18.85■□□□□ 0.61
TPM1-219ENST00000559397 SLC39A14Q15043 492 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 STK38Q15208 465 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 PTPAQ15257 358 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 JAKMIP3Q5VZ66 844 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 ZNF296Q8WUU4 475 aaPredicted RBP18.85■□□□□ 0.61
TPM1-219ENST00000559397 TRIM47Q96LD4 638 aa18.85■□□□□ 0.61
TPM1-219ENST00000559397 PURBQ96QR8 312 aaKnown RBP18.85■□□□□ 0.61
TPM1-219ENST00000559397 SLC15A5A6NIM6 579 aa18.84■□□□□ 0.61
TPM1-219ENST00000559397 TNPO2O14787 897 aaKnown RBP18.84■□□□□ 0.61
TPM1-219ENST00000559397 SPTLC2O15270 562 aa18.84■□□□□ 0.61
TPM1-219ENST00000559397 FKTNO75072 461 aa18.84■□□□□ 0.61
TPM1-219ENST00000559397 ADORA2AP29274 412 aa18.84■□□□□ 0.61
TPM1-219ENST00000559397 FCGRTP55899 365 aa18.84■□□□□ 0.61
TPM1-219ENST00000559397 RILPL1Q5EBL4 403 aa18.84■□□□□ 0.61
TPM1-219ENST00000559397 MORN1Q5T089 497 aa18.84■□□□□ 0.61
TPM1-219ENST00000559397 FAM133AQ8N9E0 248 aa18.84■□□□□ 0.61
TPM1-219ENST00000559397 BRMS1Q9HCU9 246 aa18.84■□□□□ 0.61
TPM1-219ENST00000559397 GJD2Q9UKL4 321 aa18.84■□□□□ 0.61
TPM1-219ENST00000559397 IVNS1ABPQ9Y6Y0 642 aa18.84■□□□□ 0.61
TPM1-219ENST00000559397 PGK2P07205 417 aa18.83■□□□□ 0.61
TPM1-219ENST00000559397 AP3B2Q13367 1082 aa18.83■□□□□ 0.61
TPM1-219ENST00000559397 SF3A1Q15459 793 aaKnown RBP18.83■□□□□ 0.61
TPM1-219ENST00000559397 FCHSD1Q86WN1 690 aa18.83■□□□□ 0.61
TPM1-219ENST00000559397 GAS2L3Q86XJ1 694 aa18.83■□□□□ 0.61
TPM1-219ENST00000559397 CD99L2Q8TCZ2 262 aa18.83■□□□□ 0.61
TPM1-219ENST00000559397 USP6NLQ92738 828 aa18.83■□□□□ 0.61
TPM1-219ENST00000559397 TAAR1Q96RJ0 339 aa18.83■□□□□ 0.61
TPM1-219ENST00000559397 PCDHA7Q9UN72 937 aa18.83■□□□□ 0.61
TPM1-219ENST00000559397 PLXNA1Q9UIW2 1896 aa18.83■□□□□ 0.6
TPM1-219ENST00000559397 ASTN1O14525 1302 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 A0A1W2PQ27 194 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 A0A1W2PQ64 194 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 A0A1W2PQD8 194 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 POTEB2H3BUK9 544 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 COBLO75128 1261 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 FOSP01100 380 aaPredicted RBP18.82■□□□□ 0.6
TPM1-219ENST00000559397 CNTN2Q02246 1040 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 EARS2Q5JPH6 523 aaKnown RBP18.82■□□□□ 0.6
TPM1-219ENST00000559397 ADALQ6DHV7 355 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 MCTP2Q6DN12 878 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 FGD4Q96M96 766 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.82■□□□□ 0.6
TPM1-219ENST00000559397 FRMPD4Q14CM0 1322 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 SOWAHBA6NEL2 793 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 SPDYE3A6NKU9 549 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 PPP6R2O75170 966 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 ME1P48163 572 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 KIF22Q14807 665 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 ZNF792Q3KQV3 632 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 ERO1AQ96HE7 468 aa18.82■□□□□ 0.6
TPM1-219ENST00000559397 MORC2Q9Y6X9 1032 aaPredicted RBP18.82■□□□□ 0.6
TPM1-219ENST00000559397 RPTORQ8N122 1335 aa18.81■□□□□ 0.6
TPM1-219ENST00000559397 GOLGA6L3A6NEY3 463 aa18.81■□□□□ 0.6
TPM1-219ENST00000559397 LETM1O95202 739 aaPredicted RBP18.81■□□□□ 0.6
TPM1-219ENST00000559397 MAP2K5Q13163 448 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms