RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 GNA11P29992 359 aa24.88■■□□□ 1.57
SNX1-206ENST00000559389 NSUN6Q8TEA1 469 aaKnown RBP24.88■■□□□ 1.57
SNX1-206ENST00000559389 RMDN3Q96TC7 470 aa24.88■■□□□ 1.57
SNX1-206ENST00000559389 PXMP2Q9NR77 195 aa24.88■■□□□ 1.57
SNX1-206ENST00000559389 XBP1P17861 261 aa24.87■■□□□ 1.57
SNX1-206ENST00000559389 NLRP5P59047 1200 aa24.87■■□□□ 1.57
SNX1-206ENST00000559389 NPY5RQ15761 445 aa24.87■■□□□ 1.57
SNX1-206ENST00000559389 DAGLBQ8NCG7 672 aa24.87■■□□□ 1.57
SNX1-206ENST00000559389 PHF20Q9BVI0 1012 aa24.87■■□□□ 1.57
SNX1-206ENST00000559389 GJB4Q9NTQ9 266 aa24.87■■□□□ 1.57
SNX1-206ENST00000559389 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.87■■□□□ 1.57
SNX1-206ENST00000559389 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.87■■□□□ 1.57
SNX1-206ENST00000559389 ADAMTS3O15072 1205 aa24.86■■□□□ 1.57
SNX1-206ENST00000559389 SNAI1O95863 264 aaPredicted RBP24.86■■□□□ 1.57
SNX1-206ENST00000559389 CYBAP13498 195 aa24.86■■□□□ 1.57
SNX1-206ENST00000559389 PRKAR2AP13861 404 aaKnown RBP24.86■■□□□ 1.57
SNX1-206ENST00000559389 EIF2AK2P19525 551 aaKnown RBP24.86■■□□□ 1.57
SNX1-206ENST00000559389 AP3B2Q13367 1082 aa24.86■■□□□ 1.57
SNX1-206ENST00000559389 ARHGEF16Q5VV41 709 aa24.86■■□□□ 1.57
SNX1-206ENST00000559389 REXO1Q8N1G1 1221 aaKnown RBP24.86■■□□□ 1.57
SNX1-206ENST00000559389 BICD2Q8TD16 824 aa24.86■■□□□ 1.57
SNX1-206ENST00000559389 ZNF333Q96JL9 665 aa24.86■■□□□ 1.57
SNX1-206ENST00000559389 PDCD2LQ9BRP1 358 aa24.86■■□□□ 1.57
SNX1-206ENST00000559389 BIN2Q9UBW5 565 aaPredicted RBP24.86■■□□□ 1.57
SNX1-206ENST00000559389 DDX49Q9Y6V7 483 aaKnown RBP24.86■■□□□ 1.57
SNX1-206ENST00000559389 SPDYE3A6NKU9 549 aa24.85■■□□□ 1.57
SNX1-206ENST00000559389 UBXN2AP68543 259 aa24.85■■□□□ 1.57
SNX1-206ENST00000559389 CACNB2Q08289 660 aaPredicted RBP24.85■■□□□ 1.57
SNX1-206ENST00000559389 GALNT17Q6IS24 598 aa24.85■■□□□ 1.57
SNX1-206ENST00000559389 FAM184AQ8NB25 1140 aa24.85■■□□□ 1.57
SNX1-206ENST00000559389 MPHOSPH6Q99547 160 aaKnown RBP24.85■■□□□ 1.57
SNX1-206ENST00000559389 KATNBL1Q9H079 304 aa24.85■■□□□ 1.57
SNX1-206ENST00000559389 TMEM260Q9NX78 707 aa24.85■■□□□ 1.57
SNX1-206ENST00000559389 NRBP1Q9UHY1 535 aa24.85■■□□□ 1.57
SNX1-206ENST00000559389 PCDHA4Q9UN74 947 aa24.85■■□□□ 1.57
SNX1-206ENST00000559389 KCNJ14Q9UNX9 436 aa24.85■■□□□ 1.57
SNX1-206ENST00000559389 B4DLN1 442 aa24.84■■□□□ 1.57
SNX1-206ENST00000559389 PGM5Q15124 567 aa24.84■■□□□ 1.57
SNX1-206ENST00000559389 IL31RAQ8NI17 732 aa24.84■■□□□ 1.57
SNX1-206ENST00000559389 IWS1Q96ST2 819 aa24.84■■□□□ 1.57
SNX1-206ENST00000559389 ANO3Q9BYT9 981 aa24.84■■□□□ 1.57
SNX1-206ENST00000559389 PCDHA6Q9UN73 950 aa24.84■■□□□ 1.57
SNX1-206ENST00000559389 CNPY2Q9Y2B0 182 aa24.84■■□□□ 1.57
SNX1-206ENST00000559389 KIF3AQ9Y496 699 aa24.84■■□□□ 1.57
SNX1-206ENST00000559389 PCDHA8Q9Y5H6 950 aa24.84■■□□□ 1.57
SNX1-206ENST00000559389 HTTP42858 3142 aa24.84■■□□□ 1.57
SNX1-206ENST00000559389 FOSP01100 380 aaPredicted RBP24.83■■□□□ 1.57
SNX1-206ENST00000559389 FOSBP53539 338 aa24.83■■□□□ 1.57
SNX1-206ENST00000559389 PDE4DQ08499 809 aa24.83■■□□□ 1.57
SNX1-206ENST00000559389 MCTP2Q6DN12 878 aa24.83■■□□□ 1.57
SNX1-206ENST00000559389 BLIDQ8IZY5 108 aa24.83■■□□□ 1.57
SNX1-206ENST00000559389 TRPV1Q8NER1 839 aa24.83■■□□□ 1.57
SNX1-206ENST00000559389 INTS4Q96HW7 963 aaKnown RBP24.83■■□□□ 1.57
SNX1-206ENST00000559389 SMC3Q9UQE7 1217 aa24.83■■□□□ 1.57
SNX1-206ENST00000559389 M0R2N6 131 aa24.82■■□□□ 1.56
SNX1-206ENST00000559389 NR3C2P08235 984 aa24.82■■□□□ 1.56
SNX1-206ENST00000559389 GJB2P29033 226 aa24.82■■□□□ 1.56
SNX1-206ENST00000559389 TRIM29Q14134 588 aa24.82■■□□□ 1.56
SNX1-206ENST00000559389 JAKMIP3Q5VZ66 844 aa24.82■■□□□ 1.56
SNX1-206ENST00000559389 KRT40Q6A162 431 aa24.82■■□□□ 1.56
SNX1-206ENST00000559389 RASGRP4Q8TDF6 673 aa24.82■■□□□ 1.56
SNX1-206ENST00000559389 PGBD1Q96JS3 809 aa24.82■■□□□ 1.56
SNX1-206ENST00000559389 C8orf76Q96K31 380 aa24.82■■□□□ 1.56
SNX1-206ENST00000559389 ABHD16BQ9H3Z7 469 aa24.82■■□□□ 1.56
SNX1-206ENST00000559389 EHMT1Q9H9B1 1298 aa24.82■■□□□ 1.56
SNX1-206ENST00000559389 MMP1P03956 469 aa24.81■■□□□ 1.56
SNX1-206ENST00000559389 ZNF865P0CJ78 1059 aaPredicted RBP24.81■■□□□ 1.56
SNX1-206ENST00000559389 MTFR1Q15390 333 aa24.81■■□□□ 1.56
SNX1-206ENST00000559389 PRAMEF19Q5SWL8 479 aa24.81■■□□□ 1.56
SNX1-206ENST00000559389 FBXO16Q8IX29 292 aaPredicted RBP24.81■■□□□ 1.56
SNX1-206ENST00000559389 VTA1Q9NP79 307 aa24.81■■□□□ 1.56
SNX1-206ENST00000559389 ZHX1Q9UKY1 873 aaPredicted RBP24.81■■□□□ 1.56
SNX1-206ENST00000559389 FRMPD3Q5JV73 1810 aa24.81■■□□□ 1.56
SNX1-206ENST00000559389 CCND2P30279 289 aa24.8■■□□□ 1.56
SNX1-206ENST00000559389 CCND3P30281 292 aaPredicted RBP24.8■■□□□ 1.56
SNX1-206ENST00000559389 SREBF1P36956 1147 aa24.8■■□□□ 1.56
SNX1-206ENST00000559389 ACVR2BQ13705 512 aa24.8■■□□□ 1.56
SNX1-206ENST00000559389 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.8■■□□□ 1.56
SNX1-206ENST00000559389 UNC93B1Q9H1C4 597 aa24.8■■□□□ 1.56
SNX1-206ENST00000559389 HMX1Q9NP08 348 aaPredicted RBP24.8■■□□□ 1.56
SNX1-206ENST00000559389 CCL5P13501 91 aa24.79■■□□□ 1.56
SNX1-206ENST00000559389 STXBP2Q15833 593 aa24.79■■□□□ 1.56
SNX1-206ENST00000559389 PCNX4Q63HM2 1172 aa24.79■■□□□ 1.56
SNX1-206ENST00000559389 XRRA1Q6P2D8 792 aa24.79■■□□□ 1.56
SNX1-206ENST00000559389 EEPD1Q7L9B9 569 aa24.79■■□□□ 1.56
SNX1-206ENST00000559389 VSIG10LQ86VR7 867 aa24.79■■□□□ 1.56
SNX1-206ENST00000559389 TNS4Q8IZW8 715 aa24.79■■□□□ 1.56
SNX1-206ENST00000559389 FBXO18Q8NFZ0 1043 aa24.79■■□□□ 1.56
SNX1-206ENST00000559389 KIAA1217Q5T5P2 1943 aa24.78■■□□□ 1.56
SNX1-206ENST00000559389 MYCLP12524 364 aaPredicted RBP24.78■■□□□ 1.56
SNX1-206ENST00000559389 KRT2P35908 639 aa24.78■■□□□ 1.56
SNX1-206ENST00000559389 GUCY1B3Q02153 619 aa24.78■■□□□ 1.56
SNX1-206ENST00000559389 OXER1Q8TDS5 423 aa24.78■■□□□ 1.56
SNX1-206ENST00000559389 CRYGNQ8WXF5 182 aa24.78■■□□□ 1.56
SNX1-206ENST00000559389 ABHD8Q96I13 439 aa24.78■■□□□ 1.56
SNX1-206ENST00000559389 BRMS1Q9HCU9 246 aa24.78■■□□□ 1.56
SNX1-206ENST00000559389 PAK6Q9NQU5 681 aaPredicted RBP24.78■■□□□ 1.56
SNX1-206ENST00000559389 SEPT4O43236 478 aa24.77■■□□□ 1.56
SNX1-206ENST00000559389 EIF3JO75822 258 aaKnown RBP24.77■■□□□ 1.56
SNX1-206ENST00000559389 MYCP01106 439 aaPredicted RBP24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms