RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	CHMP4BP1	P59074	171 aa		11.28	□□□□□ -0.6
PABPN1-208	ENST00000557702	RBL2	Q08999	1139 aa		11.28	□□□□□ -0.6
PABPN1-208	ENST00000557702	SLC9C2	Q5TAH2	1124 aa		11.28	□□□□□ -0.6
PABPN1-208	ENST00000557702	FBXO11	Q86XK2	927 aa		11.28	□□□□□ -0.6
PABPN1-208	ENST00000557702	IGFLR1	Q9H665	355 aa		11.28	□□□□□ -0.6
PABPN1-208	ENST00000557702	RNF146	Q9NTX7	359 aa		11.28	□□□□□ -0.6
PABPN1-208	ENST00000557702	DBNL	Q9UJU6	430 aa	Known RBP	11.28	□□□□□ -0.6
PABPN1-208	ENST00000557702	NOB1	Q9ULX3	412 aa	Known RBP	11.28	□□□□□ -0.6
PABPN1-208	ENST00000557702	NCOR2	Q9Y618	2525 aa		11.28	□□□□□ -0.6
PABPN1-208	ENST00000557702	NAV1	Q8NEY1	1877 aa		11.27	□□□□□ -0.6
PABPN1-208	ENST00000557702	EP300	Q09472	2414 aa	Predicted RBP	11.27	□□□□□ -0.6
PABPN1-208	ENST00000557702	TBX10	O75333	385 aa		11.27	□□□□□ -0.61
PABPN1-208	ENST00000557702	EYA4	O95677	639 aa		11.27	□□□□□ -0.61
PABPN1-208	ENST00000557702	TKFC	Q3LXA3	575 aa		11.27	□□□□□ -0.61
PABPN1-208	ENST00000557702	C12orf60	Q5U649	245 aa		11.27	□□□□□ -0.61
PABPN1-208	ENST00000557702	FRMD5	Q7Z6J6	570 aa		11.27	□□□□□ -0.61
PABPN1-208	ENST00000557702	MORC4	Q8TE76	937 aa		11.27	□□□□□ -0.61
PABPN1-208	ENST00000557702	RMDN1	Q96DB5	314 aa		11.27	□□□□□ -0.61
PABPN1-208	ENST00000557702	RIPOR3	Q96MK2	946 aa		11.27	□□□□□ -0.61
PABPN1-208	ENST00000557702	TRERF1	Q96PN7	1200 aa		11.27	□□□□□ -0.61
PABPN1-208	ENST00000557702	CCDC8	Q9H0W5	538 aa	Predicted RBP	11.27	□□□□□ -0.61
PABPN1-208	ENST00000557702	ATP8A2	Q9NTI2	1148 aa		11.27	□□□□□ -0.61
PABPN1-208	ENST00000557702	NYAP2	Q9P242	653 aa		11.27	□□□□□ -0.61
PABPN1-208	ENST00000557702	MYH8	P13535	1937 aa		11.27	□□□□□ -0.61
PABPN1-208	ENST00000557702	CYP2D7	A0A087X1C5	515 aa		11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702		A6NJR5	290 aa		11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	NKRF	O15226	690 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	LGR5	O75473	907 aa		11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	GNAI2	P04899	355 aa		11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	PDE6A	P16499	860 aa		11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	ICAM3	P32942	547 aa		11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	NDUFV1	P49821	464 aa		11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	ADAM15	Q13444	863 aa		11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	TTF1	Q15361	905 aa	Predicted RBP	11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	GDF6	Q6KF10	455 aa	Predicted RBP	11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	SESTD1	Q86VW0	696 aa		11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	LCORL	Q8N3X6	602 aa		11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	DHX38	Q92620	1227 aa	Known RBP	11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	CTAGE1	Q96RT6	745 aa		11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	LMAN2L	Q9H0V9	348 aa		11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	TLR7	Q9NYK1	1049 aa	Known RBP	11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	CYP39A1	Q9NYL5	469 aa		11.26	□□□□□ -0.61
PABPN1-208	ENST00000557702	CHD8	Q9HCK8	2581 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	DNAH14	Q0VDD8	3507 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	ACACB	O00763	2458 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	RBM47	A0AV96	593 aa	Known RBP	11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702		E9PSI1	815 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	LINC01565	O15544	149 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	PRKAB2	O43741	272 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	PDGFB	P01127	241 aa	Predicted RBP	11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	RB1	P06400	928 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	ALAS1	P13196	640 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.25	□□□□□ -0.61	1e-16	■■■□□ 17
PABPN1-208	ENST00000557702	PPP2R5B	Q15173	497 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	LRRC47	Q8N1G4	583 aa	Known RBP	11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	SMRP1	Q8NCR6	262 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	DDRGK1	Q96HY6	314 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	MSLNL	Q96KJ4	702 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	RPGRIP1	Q96KN7	1286 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	PHF7	Q9BWX1	381 aa	Predicted RBP	11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	ARMT1	Q9H993	441 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	CLIP2	Q9UDT6	1046 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	ZNF532	Q9HCE3	1301 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	MICAL3	Q7RTP6	2002 aa		11.25	□□□□□ -0.61
PABPN1-208	ENST00000557702	C5orf67	F2Z3F1	127 aa		11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	CTNNB1	P35222	781 aa		11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	RRP1	P56182	461 aa	Known RBP	11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	PTPN21	Q16825	1174 aa		11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	NSMF	Q6X4W1	530 aa		11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	ZBTB33	Q86T24	672 aa		11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	DBF4B	Q8NFT6	615 aa		11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	TOP1MT	Q969P6	601 aa		11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	PPP2R3C	Q969Q6	453 aa		11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	PURB	Q96QR8	312 aa	Known RBP	11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	C11orf84	Q9BUA3	381 aa	Predicted RBP	11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	MRS2	Q9HD23	443 aa		11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	INCENP	Q9NQS7	918 aa		11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	ADD3	Q9UEY8	706 aa	Known RBP	11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	BAHCC1	Q9P281	2608 aa		11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	EMSY	Q7Z589	1322 aa		11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.24	□□□□□ -0.61
PABPN1-208	ENST00000557702	ZFHX4	Q86UP3	3567 aa		11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	LOC102724159	A0A0B4J2E5	919 aa		11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	GRM6	O15303	877 aa		11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	SURF6	O75683	361 aa	Known RBP	11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	UPP2	O95045	317 aa		11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	BMPR1A	P36894	532 aa		11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	STAT2	P52630	851 aa		11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	COASY	Q13057	564 aa		11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	PWP2	Q15269	919 aa	Known RBP	11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	MUM1L1	Q5H9M0	696 aa		11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	ZNF618	Q5T7W0	954 aa		11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	CHURC1	Q8WUH1	139 aa		11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	EAF2	Q96CJ1	260 aa	Predicted RBP	11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	GTF2IRD1	Q9UHL9	959 aa		11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	ISY1	Q9ULR0	285 aa	Known RBP	11.23	□□□□□ -0.61
PABPN1-208	ENST00000557702	RWDD3	Q9Y3V2	267 aa		11.23	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms