RNA–Protein interactions for RNA: ENST00000556980.5

XRCC3-217, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-217ENST00000556980 ZEB2O60315 1214 aa20.8■□□□□ 0.92
XRCC3-217ENST00000556980 PQBP1O60828 265 aaKnown RBP20.8■□□□□ 0.92
XRCC3-217ENST00000556980 EIF2AK2P19525 551 aaKnown RBP20.8■□□□□ 0.92
XRCC3-217ENST00000556980 PTGS1P23219 599 aa20.8■□□□□ 0.92
XRCC3-217ENST00000556980 SMARCA1P28370 1054 aa20.8■□□□□ 0.92
XRCC3-217ENST00000556980 EXOSC10Q01780 885 aaKnown RBP20.8■□□□□ 0.92
XRCC3-217ENST00000556980 GHRHRQ02643 423 aa20.8■□□□□ 0.92
XRCC3-217ENST00000556980 TLE2Q04725 743 aa20.8■□□□□ 0.92
XRCC3-217ENST00000556980 PPP2R5BQ15173 497 aa20.8■□□□□ 0.92
XRCC3-217ENST00000556980 TMEM63BQ5T3F8 832 aa20.8■□□□□ 0.92
XRCC3-217ENST00000556980 SAMD3Q8N6K7 520 aa20.8■□□□□ 0.92
XRCC3-217ENST00000556980 FANCBQ8NB91 859 aa20.8■□□□□ 0.92
XRCC3-217ENST00000556980 IWS1Q96ST2 819 aa20.8■□□□□ 0.92
XRCC3-217ENST00000556980 GDF15Q99988 308 aa20.8■□□□□ 0.92
XRCC3-217ENST00000556980 LBHD1Q9BQE6 289 aaPredicted RBP20.8■□□□□ 0.92
XRCC3-217ENST00000556980 ELP1O95163 1332 aa20.79■□□□□ 0.92
XRCC3-217ENST00000556980 RBM47A0AV96 593 aaKnown RBP20.79■□□□□ 0.92
XRCC3-217ENST00000556980 GCOM1H8Y6P7 765 aaPredicted RBP20.79■□□□□ 0.92
XRCC3-217ENST00000556980 POLR2MP0CAP2 368 aa20.79■□□□□ 0.92
XRCC3-217ENST00000556980 HOXA13P31271 388 aaPredicted RBP20.79■□□□□ 0.92
XRCC3-217ENST00000556980 FGD1P98174 961 aa20.79■□□□□ 0.92
XRCC3-217ENST00000556980 STXBP2Q15833 593 aa20.79■□□□□ 0.92
XRCC3-217ENST00000556980 SRBD1Q8N5C6 995 aaKnown RBP20.79■□□□□ 0.92
XRCC3-217ENST00000556980 KCNB2Q92953 911 aa20.79■□□□□ 0.92
XRCC3-217ENST00000556980 JAKMIP1Q96N16 626 aaKnown RBP20.79■□□□□ 0.92
XRCC3-217ENST00000556980 PXMP2Q9NR77 195 aa20.79■□□□□ 0.92
XRCC3-217ENST00000556980 PCDH10Q9P2E7 1040 aa20.79■□□□□ 0.92
XRCC3-217ENST00000556980 MDM2Q00987 491 aaPredicted RBP20.78■□□□□ 0.92
XRCC3-217ENST00000556980 APOA5Q6Q788 366 aa20.78■□□□□ 0.92
XRCC3-217ENST00000556980 CMTR1Q8N1G2 835 aaKnown RBP20.78■□□□□ 0.92
XRCC3-217ENST00000556980 PDLIM7Q9NR12 457 aa20.78■□□□□ 0.92
XRCC3-217ENST00000556980 SNX14Q9Y5W7 946 aa20.78■□□□□ 0.92
XRCC3-217ENST00000556980 A0A0U1RQG5 324 aaPredicted RBP20.77■□□□□ 0.92
XRCC3-217ENST00000556980 A0A1W2PPC1 479 aa20.77■□□□□ 0.92
XRCC3-217ENST00000556980 NKRFO15226 690 aaKnown RBP eCLIP20.77■□□□□ 0.92
XRCC3-217ENST00000556980 CABYRO75952 493 aa20.77■□□□□ 0.92
XRCC3-217ENST00000556980 TXNP10599 105 aaKnown RBP20.77■□□□□ 0.92
XRCC3-217ENST00000556980 BMP8BP34820 402 aa20.77■□□□□ 0.92
XRCC3-217ENST00000556980 TTLL4Q14679 1199 aa20.77■□□□□ 0.92
XRCC3-217ENST00000556980 CXCL17Q6UXB2 119 aa20.77■□□□□ 0.92
XRCC3-217ENST00000556980 TMTC3Q6ZXV5 915 aa20.77■□□□□ 0.92
XRCC3-217ENST00000556980 OR6J1Q8NGC5 347 aa20.77■□□□□ 0.92
XRCC3-217ENST00000556980 UBE2OQ9C0C9 1292 aaKnown RBP20.77■□□□□ 0.92
XRCC3-217ENST00000556980 DNAH12Q6ZR08 3092 aa20.77■□□□□ 0.92
XRCC3-217ENST00000556980 DCDC2CA8MYV0 355 aa20.76■□□□□ 0.91
XRCC3-217ENST00000556980 ZBTB43O43298 467 aa20.76■□□□□ 0.91
XRCC3-217ENST00000556980 NR3C2P08235 984 aa20.76■□□□□ 0.91
XRCC3-217ENST00000556980 CLTBP09497 229 aa20.76■□□□□ 0.91
XRCC3-217ENST00000556980 CPT1AP50416 773 aa20.76■□□□□ 0.91
XRCC3-217ENST00000556980 BRDTQ58F21 947 aaPredicted RBP20.76■□□□□ 0.91
XRCC3-217ENST00000556980 BLOC1S2Q6QNY1 142 aa20.76■□□□□ 0.91
XRCC3-217ENST00000556980 SEPT14Q6ZU15 432 aa20.76■□□□□ 0.91
XRCC3-217ENST00000556980 ANKRD33Q7Z3H0 272 aa20.76■□□□□ 0.91
XRCC3-217ENST00000556980 FCHSD1Q86WN1 690 aa20.76■□□□□ 0.91
XRCC3-217ENST00000556980 CCDC82Q8N4S0 544 aa20.76■□□□□ 0.91
XRCC3-217ENST00000556980 RBM28Q9NW13 759 aaKnown RBP20.76■□□□□ 0.91
XRCC3-217ENST00000556980 BRPF3Q9ULD4 1205 aa20.76■□□□□ 0.91
XRCC3-217ENST00000556980 NAP1L2Q9ULW6 460 aaPredicted RBP20.76■□□□□ 0.91
XRCC3-217ENST00000556980 MROH7Q68CQ1 1323 aa20.76■□□□□ 0.91
XRCC3-217ENST00000556980 KLF18A0A0U1RQI7 1052 aa20.75■□□□□ 0.91
XRCC3-217ENST00000556980 EPB41L2O43491 1005 aaKnown RBP20.75■□□□□ 0.91
XRCC3-217ENST00000556980 EIF3JO75822 258 aaKnown RBP20.75■□□□□ 0.91
XRCC3-217ENST00000556980 CPA1P15085 419 aa20.75■□□□□ 0.91
XRCC3-217ENST00000556980 RTN1Q16799 776 aa20.75■□□□□ 0.91
XRCC3-217ENST00000556980 TOX2Q96NM4 488 aa20.75■□□□□ 0.91
XRCC3-217ENST00000556980 PDCD2LQ9BRP1 358 aa20.75■□□□□ 0.91
XRCC3-217ENST00000556980 GOLGA8AA7E2F4 631 aa20.74■□□□□ 0.91
XRCC3-217ENST00000556980 GOLGA8BA8MQT2 603 aa20.74■□□□□ 0.91
XRCC3-217ENST00000556980 ARVCFO00192 962 aa20.74■□□□□ 0.91
XRCC3-217ENST00000556980 ARIH2O95376 493 aa20.74■□□□□ 0.91
XRCC3-217ENST00000556980 MYCLP12524 364 aaPredicted RBP20.74■□□□□ 0.91
XRCC3-217ENST00000556980 PSMA5P28066 241 aa20.74■□□□□ 0.91
XRCC3-217ENST00000556980 FXR1P51114 621 aaKnown RBP eCLIP20.74■□□□□ 0.91
XRCC3-217ENST00000556980 SH3RF1Q7Z6J0 888 aa20.74■□□□□ 0.91
XRCC3-217ENST00000556980 COPS5Q92905 334 aa20.74■□□□□ 0.91
XRCC3-217ENST00000556980 CUL5Q93034 780 aa20.74■□□□□ 0.91
XRCC3-217ENST00000556980 POLR3EQ9NVU0 708 aa20.74■□□□□ 0.91
XRCC3-217ENST00000556980 MYH6P13533 1939 aa20.73■□□□□ 0.91
XRCC3-217ENST00000556980 hCG_1642624A0A1W2PR95 340 aa20.73■□□□□ 0.91
XRCC3-217ENST00000556980 TRIM43BA6NCK2 446 aa20.73■□□□□ 0.91
XRCC3-217ENST00000556980 PGM5Q15124 567 aa20.73■□□□□ 0.91
XRCC3-217ENST00000556980 CCDC62Q6P9F0 684 aa20.73■□□□□ 0.91
XRCC3-217ENST00000556980 Q6ZUG5 572 aa20.73■□□□□ 0.91
XRCC3-217ENST00000556980 SMARCC2Q8TAQ2 1214 aa20.73■□□□□ 0.91
XRCC3-217ENST00000556980 TRIM43Q96BQ3 446 aaPredicted RBP20.73■□□□□ 0.91
XRCC3-217ENST00000556980 TMEM39AQ9NV64 488 aa20.73■□□□□ 0.91
XRCC3-217ENST00000556980 MYL3P08590 195 aa20.72■□□□□ 0.91
XRCC3-217ENST00000556980 CASTP20810 708 aaKnown RBP20.72■□□□□ 0.91
XRCC3-217ENST00000556980 RPS6KB1P23443 525 aa20.72■□□□□ 0.91
XRCC3-217ENST00000556980 CCND2P30279 289 aa20.72■□□□□ 0.91
XRCC3-217ENST00000556980 CDK7P50613 346 aa20.72■□□□□ 0.91
XRCC3-217ENST00000556980 RCAN1P53805 252 aa20.72■□□□□ 0.91
XRCC3-217ENST00000556980 FAAP100Q0VG06 881 aa20.72■□□□□ 0.91
XRCC3-217ENST00000556980 ITGA7Q13683 1181 aa20.72■□□□□ 0.91
XRCC3-217ENST00000556980 HEATR3Q7Z4Q2 680 aa20.72■□□□□ 0.91
XRCC3-217ENST00000556980 TDHQ8IZJ6 230 aa20.72■□□□□ 0.91
XRCC3-217ENST00000556980 BRF1Q92994 677 aa20.72■□□□□ 0.91
XRCC3-217ENST00000556980 MRVI1Q9Y6F6 885 aa20.72■□□□□ 0.91
XRCC3-217ENST00000556980 RANBP2P49792 3224 aaKnown RBP20.71■□□□□ 0.91
XRCC3-217ENST00000556980 TRIOBPQ9H2D6 2365 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms