RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 HLA-CQ95604 372 aa14.01□□□□□ -0.17
ACTN1-221ENST00000556571 ARIH1Q9Y4X5 557 aaPredicted RBP14.01□□□□□ -0.17
ACTN1-221ENST00000556571 TLL1O43897 1013 aa14□□□□□ -0.17
ACTN1-221ENST00000556571 FGRP09769 529 aa14□□□□□ -0.17
ACTN1-221ENST00000556571 TXNP10599 105 aaKnown RBP14□□□□□ -0.17
ACTN1-221ENST00000556571 EDNRBP24530 442 aa14□□□□□ -0.17
ACTN1-221ENST00000556571 RPS6P62753 249 aaKnown RBP14□□□□□ -0.17
ACTN1-221ENST00000556571 KRT40Q6A162 431 aa14□□□□□ -0.17
ACTN1-221ENST00000556571 SLC30A10Q6XR72 485 aa14□□□□□ -0.17
ACTN1-221ENST00000556571 TMEM47Q9BQJ4 181 aa14□□□□□ -0.17
ACTN1-221ENST00000556571 LRRC37A2A6NM11 1700 aa14□□□□□ -0.17
ACTN1-221ENST00000556571 PIEZO1Q92508 2521 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 FRMPD2Q68DX3 1309 aaPredicted RBP13.99□□□□□ -0.17
ACTN1-221ENST00000556571 ARHGEF15O94989 841 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 KCNJ6P48051 423 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 GRB10Q13322 594 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 ALX1Q15699 326 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 CCDC155Q8N6L0 562 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 CAGE1Q8TC20 777 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 COPS5Q92905 334 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 LRFN3Q9BTN0 628 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 EPHX3Q9H6B9 360 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 GPCPD1Q9NPB8 672 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 TOMM22Q9NS69 142 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 TCP11L1Q9NUJ3 509 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 LMCD1Q9NZU5 365 aa13.99□□□□□ -0.17
ACTN1-221ENST00000556571 SCN10AQ9Y5Y9 1956 aa13.98□□□□□ -0.17
ACTN1-221ENST00000556571 WDR19Q8NEZ3 1342 aa13.98□□□□□ -0.17
ACTN1-221ENST00000556571 PARNO95453 639 aaKnown RBP13.98□□□□□ -0.17
ACTN1-221ENST00000556571 PTGISQ16647 500 aa13.98□□□□□ -0.17
ACTN1-221ENST00000556571 RGS22Q8NE09 1264 aa13.98□□□□□ -0.17
ACTN1-221ENST00000556571 OTUD7AQ8TE49 926 aaPredicted RBP13.98□□□□□ -0.17
ACTN1-221ENST00000556571 AFAP1L1Q8TED9 768 aa13.98□□□□□ -0.17
ACTN1-221ENST00000556571 PPP1R13LQ8WUF5 828 aa13.98□□□□□ -0.17
ACTN1-221ENST00000556571 HCN4Q9Y3Q4 1203 aa13.98□□□□□ -0.17
ACTN1-221ENST00000556571 REV3LO60673 3130 aa13.98□□□□□ -0.17
ACTN1-221ENST00000556571 BRWD1Q9NSI6 2320 aa13.97□□□□□ -0.17
ACTN1-221ENST00000556571 LPXNO60711 386 aa13.97□□□□□ -0.17
ACTN1-221ENST00000556571 PDHBP11177 359 aa13.97□□□□□ -0.17
ACTN1-221ENST00000556571 MX1P20591 662 aa13.97□□□□□ -0.17
ACTN1-221ENST00000556571 HOXD11P31277 338 aaPredicted RBP13.97□□□□□ -0.17
ACTN1-221ENST00000556571 CHMP4BP1P59074 171 aa13.97□□□□□ -0.17
ACTN1-221ENST00000556571 RRP12Q5JTH9 1297 aaKnown RBP13.97□□□□□ -0.17
ACTN1-221ENST00000556571 TMEM31Q5JXX7 168 aa13.97□□□□□ -0.17
ACTN1-221ENST00000556571 VPS53Q5VIR6 699 aa13.97□□□□□ -0.17
ACTN1-221ENST00000556571 TTC14Q96N46 770 aa13.97□□□□□ -0.17
ACTN1-221ENST00000556571 ZBED2Q9BTP6 218 aa13.97□□□□□ -0.17
ACTN1-221ENST00000556571 MAF1Q9H063 256 aa13.97□□□□□ -0.17
ACTN1-221ENST00000556571 LCTP09848 1927 aa13.96□□□□□ -0.17
ACTN1-221ENST00000556571 SELPP16109 830 aa13.96□□□□□ -0.17
ACTN1-221ENST00000556571 WDR5P61964 334 aaKnown RBP13.96□□□□□ -0.17
ACTN1-221ENST00000556571 ZNF543Q08ER8 600 aa13.96□□□□□ -0.17
ACTN1-221ENST00000556571 CCDC62Q6P9F0 684 aa13.96□□□□□ -0.17
ACTN1-221ENST00000556571 SESTD1Q86VW0 696 aa13.96□□□□□ -0.17
ACTN1-221ENST00000556571 HELLSQ9NRZ9 838 aa13.96□□□□□ -0.17
ACTN1-221ENST00000556571 SCN5AQ14524 2016 aa13.96□□□□□ -0.17
ACTN1-221ENST00000556571 TET1Q8NFU7 2136 aa13.96□□□□□ -0.18
ACTN1-221ENST00000556571 GPR37L1O60883 481 aa13.95□□□□□ -0.18
ACTN1-221ENST00000556571 ARIH2O95376 493 aa13.95□□□□□ -0.18
ACTN1-221ENST00000556571 GH1P01241 217 aa13.95□□□□□ -0.18
ACTN1-221ENST00000556571 FGAP02671 866 aa13.95□□□□□ -0.18
ACTN1-221ENST00000556571 SNHG28P0DPA3 235 aa13.95□□□□□ -0.18
ACTN1-221ENST00000556571 CASTP20810 708 aaKnown RBP13.95□□□□□ -0.18
ACTN1-221ENST00000556571 GPNMBQ14956 572 aa13.95□□□□□ -0.18
ACTN1-221ENST00000556571 CNKSR3Q6P9H4 555 aa13.95□□□□□ -0.18
ACTN1-221ENST00000556571 LRRC8DQ7L1W4 858 aa13.95□□□□□ -0.18
ACTN1-221ENST00000556571 SPRED2Q7Z698 418 aa13.95□□□□□ -0.18
ACTN1-221ENST00000556571 AFG1LQ8WV93 481 aa13.95□□□□□ -0.18
ACTN1-221ENST00000556571 EVI5LQ96CN4 794 aa13.95□□□□□ -0.18
ACTN1-221ENST00000556571 CTAGE1Q96RT6 745 aa13.95□□□□□ -0.18
ACTN1-221ENST00000556571 RAD9AQ99638 391 aa13.95□□□□□ -0.18
ACTN1-221ENST00000556571 ABHD14A-ACY1A0A1B0GW23 586 aa13.94□□□□□ -0.18
ACTN1-221ENST00000556571 LCHNA4D1U4 455 aa13.94□□□□□ -0.18
ACTN1-221ENST00000556571 EFCAB14O75071 495 aa13.94□□□□□ -0.18
ACTN1-221ENST00000556571 CXCL10P02778 98 aa13.94□□□□□ -0.18
ACTN1-221ENST00000556571 MMP3P08254 477 aa13.94□□□□□ -0.18
ACTN1-221ENST00000556571 PCP11498 1178 aaKnown RBP13.94□□□□□ -0.18
ACTN1-221ENST00000556571 RBL2Q08999 1139 aa13.94□□□□□ -0.18
ACTN1-221ENST00000556571 GPATCH4Q5T3I0 446 aaKnown RBP13.94□□□□□ -0.18
ACTN1-221ENST00000556571 GDF6Q6KF10 455 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-221ENST00000556571 NSUN6Q8TEA1 469 aaKnown RBP13.94□□□□□ -0.18
ACTN1-221ENST00000556571 KAT2BQ92831 832 aa13.94□□□□□ -0.18
ACTN1-221ENST00000556571 TGS1Q96RS0 853 aaKnown RBP13.94□□□□□ -0.18
ACTN1-221ENST00000556571 MUC6Q6W4X9 2439 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 GJB5O95377 273 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 ERVK-21P61565 698 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 DEFB103AP81534 67 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 ARHGAP1Q07960 439 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 DGKDQ16760 1214 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 LY6KQ17RY6 165 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 USH1GQ495M9 461 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 MCMDC2Q4G0Z9 681 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 MFSD6Q6ZSS7 791 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 SEPT14Q6ZU15 432 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 TMCO2Q7Z6W1 182 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-221ENST00000556571 TICAM2Q86XR7 235 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 C7orf31Q8N865 590 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 GDPD5Q8WTR4 605 aa13.93□□□□□ -0.18
ACTN1-221ENST00000556571 DHX38Q92620 1227 aaKnown RBP13.93□□□□□ -0.18
ACTN1-221ENST00000556571 IWS1Q96ST2 819 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms