RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 TBC1D5Q92609 795 aa15.25■□□□□ 0.03
HNRNPC-205ENST00000553300 PIGSQ96S52 555 aa15.25■□□□□ 0.03
HNRNPC-205ENST00000553300 RMDN3Q96TC7 470 aa15.25■□□□□ 0.03
HNRNPC-205ENST00000553300 PRDM5Q9NQX1 630 aaPredicted RBP15.25■□□□□ 0.03
HNRNPC-205ENST00000553300 PDLIM7Q9NR12 457 aa15.25■□□□□ 0.03
HNRNPC-205ENST00000553300 DDX49Q9Y6V7 483 aaKnown RBP15.25■□□□□ 0.03
HNRNPC-205ENST00000553300 ARVCFO00192 962 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 KIAA0355O15063 1070 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 PQBP1O60828 265 aaKnown RBP15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 CPT1AP50416 773 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 CDK7P50613 346 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 TTLL4Q14679 1199 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 PPP2R5BQ15173 497 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 STXBP2Q15833 593 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 ARHGEF16Q5VV41 709 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 NEK1Q96PY6 1258 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 TAAR1Q96RJ0 339 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 SPZ1Q9BXG8 430 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 SLC12A7Q9Y666 1083 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 CYTH3O43739 400 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 HMGB1P09429 215 aaKnown RBP15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 BEX3Q00994 111 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 LRIT3Q3SXY7 679 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 SYNE3Q6ZMZ3 975 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 SGMS1Q86VZ5 419 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 RRP36Q96EU6 259 aaKnown RBP15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 TMEM39AQ9NV64 488 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 POLR3EQ9NVU0 708 aa15.24■□□□□ 0.03
HNRNPC-205ENST00000553300 TRIM43BA6NCK2 446 aa15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 GCOM1H8Y6P7 765 aaPredicted RBP15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 OPLAHO14841 1288 aa15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 TLR3O15455 904 aaKnown RBP15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 KPNA6O60684 536 aa15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 PPP1R11O60927 126 aaPredicted RBP15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 EIF3JO75822 258 aaKnown RBP15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 POLR2MP0CAP2 368 aa15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 TXNP10599 105 aaKnown RBP15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 RAG1P15918 1043 aa15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 IRX5P78411 483 aaPredicted RBP15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 FAAP100Q0VG06 881 aa15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 GPR153Q6NV75 609 aa15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 CXCL17Q6UXB2 119 aa15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 DHX32Q7L7V1 743 aaKnown RBP15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 TRIM43Q96BQ3 446 aaPredicted RBP15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 PXMP2Q9NR77 195 aa15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 COL20A1Q9P218 1284 aa15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 SEC63Q9UGP8 760 aaKnown RBP15.23■□□□□ 0.03
HNRNPC-205ENST00000553300 REC8O95072 547 aa15.22■□□□□ 0.03
HNRNPC-205ENST00000553300 NR3C2P08235 984 aa15.22■□□□□ 0.03
HNRNPC-205ENST00000553300 SLC35G1Q2M3R5 365 aa15.22■□□□□ 0.03
HNRNPC-205ENST00000553300 SH3RF1Q7Z6J0 888 aa15.22■□□□□ 0.03
HNRNPC-205ENST00000553300 SLC43A3Q8NBI5 491 aa15.22■□□□□ 0.03
HNRNPC-205ENST00000553300 OR6J1Q8NGC5 347 aa15.22■□□□□ 0.03
HNRNPC-205ENST00000553300 MYL10Q9BUA6 226 aa15.22■□□□□ 0.03
HNRNPC-205ENST00000553300 GPHNQ9NQX3 736 aaPredicted RBP15.22■□□□□ 0.03
HNRNPC-205ENST00000553300 A6NJR5 290 aa15.21■□□□□ 0.02
HNRNPC-205ENST00000553300 EPB41L2O43491 1005 aaKnown RBP15.21■□□□□ 0.02
HNRNPC-205ENST00000553300 EXOSC10Q01780 885 aaKnown RBP15.21■□□□□ 0.02
HNRNPC-205ENST00000553300 ITGA7Q13683 1181 aa15.21■□□□□ 0.02
HNRNPC-205ENST00000553300 TMEM63BQ5T3F8 832 aa15.21■□□□□ 0.02
HNRNPC-205ENST00000553300 KCNV1Q6PIU1 500 aa15.21■□□□□ 0.02
HNRNPC-205ENST00000553300 FANCBQ8NB91 859 aa15.21■□□□□ 0.02
HNRNPC-205ENST00000553300 BADQ92934 168 aa15.21■□□□□ 0.02
HNRNPC-205ENST00000553300 PPP4R2Q9NY27 417 aa15.21■□□□□ 0.02
HNRNPC-205ENST00000553300 TIMP1P01033 207 aa15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 CENPBP07199 599 aaPredicted RBP15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 EIF2AK2P19525 551 aaKnown RBP15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 PURAQ00577 322 aaKnown RBP15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 CCDC62Q6P9F0 684 aa15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 SEPT14Q6ZU15 432 aa15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 VSIG10LQ86VR7 867 aa15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 FAM126BQ8IXS8 530 aa15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 RASEFQ8IZ41 740 aa15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 KCNB2Q92953 911 aa15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 PDCD2LQ9BRP1 358 aa15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 RBM28Q9NW13 759 aaKnown RBP15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 PCDH10Q9P2E7 1040 aa15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 TBX21Q9UL17 535 aa15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 LTBP2Q14767 1821 aa15.2■□□□□ 0.02
HNRNPC-205ENST00000553300 KIAA1217Q5T5P2 1943 aa15.19■□□□□ 0.02
HNRNPC-205ENST00000553300 STAM2O75886 525 aa15.19■□□□□ 0.02
HNRNPC-205ENST00000553300 GH1P01241 217 aa15.19■□□□□ 0.02
HNRNPC-205ENST00000553300 CD4P01730 458 aa15.19■□□□□ 0.02
HNRNPC-205ENST00000553300 TGFB3P10600 412 aa15.19■□□□□ 0.02
HNRNPC-205ENST00000553300 HOXA13P31271 388 aaPredicted RBP15.19■□□□□ 0.02
HNRNPC-205ENST00000553300 RCAN1P53805 252 aa15.19■□□□□ 0.02
HNRNPC-205ENST00000553300 SRBD1Q8N5C6 995 aaKnown RBP15.19■□□□□ 0.02
HNRNPC-205ENST00000553300 CUL5Q93034 780 aa15.19■□□□□ 0.02
HNRNPC-205ENST00000553300 MTG1Q9BT17 334 aaPredicted RBP15.19■□□□□ 0.02
HNRNPC-205ENST00000553300 LRRC2Q9BYS8 371 aa15.19■□□□□ 0.02
HNRNPC-205ENST00000553300 PLEKHA8P1O95397 391 aa15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 SUPT20HL2P0C7V6 817 aa15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 ITGB8P26012 769 aa15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 CCND2P30279 289 aa15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 HSPA4P34932 840 aa15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 FPGSQ05932 587 aa15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 PGM5Q15124 567 aa15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 ADCK5Q3MIX3 580 aa15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 APOA5Q6Q788 366 aa15.18■□□□□ 0.02
HNRNPC-205ENST00000553300 TMTC3Q6ZXV5 915 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms