RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 TXNP10599 105 aaKnown RBP11.33□□□□□ -0.6
GCN1-208ENST00000551549 CSF2RAP15509 400 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 CPT1AP50416 773 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 ANTXR2P58335 489 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 SMAD3P84022 425 aaKnown RBP11.33□□□□□ -0.6
GCN1-208ENST00000551549 PURAQ00577 322 aaKnown RBP11.33□□□□□ -0.6
GCN1-208ENST00000551549 GRM4Q14833 912 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 WTAPQ15007 396 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 PPP2R5BQ15173 497 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 TMEM67Q5HYA8 995 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 MB21D2Q8IYB1 491 aaPredicted RBP11.33□□□□□ -0.6
GCN1-208ENST00000551549 NCOA7Q8NI08 942 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 IGDCC4Q8TDY8 1250 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 NSUN6Q8TEA1 469 aaKnown RBP11.33□□□□□ -0.6
GCN1-208ENST00000551549 PPP1R13LQ8WUF5 828 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 RMDN3Q96TC7 470 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.33□□□□□ -0.6
GCN1-208ENST00000551549 AMNQ9BXJ7 453 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 MAF1Q9H063 256 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 LSG1Q9H089 658 aaKnown RBP11.33□□□□□ -0.6
GCN1-208ENST00000551549 GPHNQ9NQX3 736 aaPredicted RBP11.33□□□□□ -0.6
GCN1-208ENST00000551549 STXBP5LQ9Y2K9 1186 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 XIRP2A4UGR9 3374 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 MUC3AQ02505 3323 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 UMODL1Q5DID0 1318 aa11.33□□□□□ -0.6
GCN1-208ENST00000551549 ERICH2A1L162 156 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 A6NJR5 290 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 B4DLN1 442 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 ZBTB5O15062 677 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 CFBP00751 764 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 EIF2AK2P19525 551 aaKnown RBP11.32□□□□□ -0.6
GCN1-208ENST00000551549 MRPL12P52815 198 aaKnown RBP11.32□□□□□ -0.6
GCN1-208ENST00000551549 TROAPQ12815 778 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 COL9A3Q14050 684 aaPredicted RBP11.32□□□□□ -0.6
GCN1-208ENST00000551549 TTLL4Q14679 1199 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 LY6KQ17RY6 165 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 TMEM240Q5SV17 173 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 ARHGEF16Q5VV41 709 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 CCDC62Q6P9F0 684 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 SEPT14Q6ZU15 432 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 HOMER1Q86YM7 354 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 TMEM199Q8N511 208 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 PIGSQ96S52 555 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 MTG1Q9BT17 334 aaPredicted RBP11.32□□□□□ -0.6
GCN1-208ENST00000551549 ALDH8A1Q9H2A2 487 aaPredicted RBP11.32□□□□□ -0.6
GCN1-208ENST00000551549 SEMA6BQ9H3T3 888 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 PXMP2Q9NR77 195 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 TRMT13Q9NUP7 481 aaKnown RBP11.32□□□□□ -0.6
GCN1-208ENST00000551549 POLR3EQ9NVU0 708 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 PCDHA1Q9Y5I3 950 aa11.32□□□□□ -0.6
GCN1-208ENST00000551549 NKRFO15226 690 aaKnown RBP eCLIP11.31□□□□□ -0.6
GCN1-208ENST00000551549 CYTH3O43739 400 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 HOXA13P31271 388 aaPredicted RBP11.31□□□□□ -0.6
GCN1-208ENST00000551549 HSD17B4P51659 736 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 CCL23P55773 120 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 PPIGQ13427 754 aaKnown RBP eCLIP11.31□□□□□ -0.66e-12■■■□□ 16.5
GCN1-208ENST00000551549 SART3Q15020 963 aaKnown RBP11.31□□□□□ -0.6
GCN1-208ENST00000551549 STXBP2Q15833 593 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 NBPF20Q3BBV1 942 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 ZNF697Q5TEC3 545 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 ZNF365Q70YC5 407 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 CATIPQ7Z7H3 387 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 SLC17A8Q8NDX2 589 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 AFG1LQ8WV93 481 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 PIBF1Q8WXW3 757 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 IWS1Q96ST2 819 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 ESYT1Q9BSJ8 1104 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 NOC4LQ9BVI4 516 aaKnown RBP11.31□□□□□ -0.6
GCN1-208ENST00000551549 SEZ6LQ9BYH1 1024 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 TTYH1Q9H313 450 aaPredicted RBP11.31□□□□□ -0.6
GCN1-208ENST00000551549 HIPK3Q9H422 1215 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 RIOX1Q9H6W3 641 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 LY9Q9HBG7 655 aa11.31□□□□□ -0.6
GCN1-208ENST00000551549 BAZ2BQ9UIF8 2168 aaKnown RBP11.3□□□□□ -0.6
GCN1-208ENST00000551549 PNMA6FA0A0J9YX94 578 aa11.3□□□□□ -0.6
GCN1-208ENST00000551549 SLC27A2O14975 620 aa11.3□□□□□ -0.6
GCN1-208ENST00000551549 PRC1O43663 620 aa11.3□□□□□ -0.6
GCN1-208ENST00000551549 EIF3JO75822 258 aaKnown RBP11.3□□□□□ -0.6
GCN1-208ENST00000551549 NR3C2P08235 984 aa11.3□□□□□ -0.6
GCN1-208ENST00000551549 CYP2C9P11712 490 aa11.3□□□□□ -0.6
GCN1-208ENST00000551549 GHRHRQ02643 423 aa11.3□□□□□ -0.6
GCN1-208ENST00000551549 ARHGAP1Q07960 439 aa11.3□□□□□ -0.6
GCN1-208ENST00000551549 BRDTQ58F21 947 aaPredicted RBP11.3□□□□□ -0.6
GCN1-208ENST00000551549 MYL10Q9BUA6 226 aa11.3□□□□□ -0.6
GCN1-208ENST00000551549 WNT8AQ9H1J5 351 aa11.3□□□□□ -0.6
GCN1-208ENST00000551549 IL23AQ9NPF7 189 aa11.3□□□□□ -0.6
GCN1-208ENST00000551549 KPNA6O60684 536 aa11.29□□□□□ -0.6
GCN1-208ENST00000551549 GH1P01241 217 aa11.29□□□□□ -0.6
GCN1-208ENST00000551549 MYCLP12524 364 aaPredicted RBP11.29□□□□□ -0.6
GCN1-208ENST00000551549 CHMP4BP1P59074 171 aa11.29□□□□□ -0.6
GCN1-208ENST00000551549 FAM47CQ5HY64 1035 aa11.29□□□□□ -0.6
GCN1-208ENST00000551549 RASIP1Q5U651 963 aa11.29□□□□□ -0.6
GCN1-208ENST00000551549 CREB3L3Q68CJ9 461 aa11.29□□□□□ -0.6
GCN1-208ENST00000551549 CENPQQ7L2Z9 268 aaPredicted RBP11.29□□□□□ -0.6
GCN1-208ENST00000551549 ZNF654Q8IZM8 581 aa11.29□□□□□ -0.6
GCN1-208ENST00000551549 IL31RAQ8NI17 732 aa11.29□□□□□ -0.6
GCN1-208ENST00000551549 VWCEQ96DN2 955 aa11.29□□□□□ -0.6
GCN1-208ENST00000551549 SCLYQ96I15 445 aa11.29□□□□□ -0.6
GCN1-208ENST00000551549 ZFP91Q96JP5 570 aaPredicted RBP11.29□□□□□ -0.6
GCN1-208ENST00000551549 CDX2Q99626 313 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms