RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 KRT86O43790 486 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 PDHBP11177 359 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 TBC1D10BQ4KMP7 808 aaPredicted RBP15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 BARGINQ6ZT62 677 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 BCS1LQ9Y276 419 aa15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 REXO2Q9Y3B8 237 aaKnown RBP15.22■□□□□ 0.03
PRPF40B-209ENST00000548825 XIRP1Q702N8 1843 aaKnown RBP15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 SFI1A8K8P3 1242 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 H3BQF6 201 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 HOXA13P31271 388 aaPredicted RBP15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 DNM2P50570 870 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 GPS2Q13227 327 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 UTP14CQ5TAP6 766 aaKnown RBP15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 DUSP9Q99956 384 aaKnown RBP15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 KCND1Q9NSA2 647 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 SAR1BQ9Y6B6 198 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 KLRC4O43908 158 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 FGRP09769 529 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 PBX1P40424 430 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 SLC1A4P43007 532 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 TTI2Q6NXR4 508 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 SEPT12Q8IYM1 358 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 ADGRF4Q8IZF3 695 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 KIAA0895Q8NCT3 520 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 IFIH1Q9BYX4 1025 aaKnown RBP15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 ANKZF1Q9H8Y5 726 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 PSTPIP2Q9H939 334 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 BMP2KQ9NSY1 1161 aaPredicted RBP15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 DDX25Q9UHL0 483 aaKnown RBP15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 FAN1Q9Y2M0 1017 aa15.21■□□□□ 0.03
PRPF40B-209ENST00000548825 CCNE1P24864 410 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 RASSF7Q02833 373 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 PRR16Q569H4 304 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 MAEAQ7L5Y9 396 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 PROCA1Q8NCQ7 364 aaPredicted RBP15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 NEDD1Q8NHV4 660 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 SERPINB13Q9UIV8 391 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 PCDHA12Q9UN75 941 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 CNTNAP4Q9C0A0 1308 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 BICDL2A1A5D9 508 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 KIF20AO95235 890 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 ZNF76P36508 570 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 ARHGAP25P42331 645 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 RAPGEF1Q13905 1077 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 DCAF17Q5H9S7 520 aaPredicted RBP15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 CNNM4Q6P4Q7 775 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 TMED8Q6PL24 325 aaPredicted RBP15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 GIMAP8Q8ND71 665 aaPredicted RBP15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 PACSIN2Q9UNF0 486 aaPredicted RBP15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 MYH8P13535 1937 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 POTEB3A0JP26 581 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 POTECB2RU33 542 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 EIF4A3P38919 411 aaKnown RBP15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 HERVK_113P62684 666 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 PABPC4Q13310 644 aaKnown RBP eCLIP15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 TTC19Q6DKK2 380 aaPredicted RBP15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 POTEBQ6S5H4 581 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 ZMYND12Q9H0C1 365 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 SEMA6BQ9H3T3 888 aa15.2■□□□□ 0.02
PRPF40B-209ENST00000548825 CAPN2P17655 700 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 GFPT1Q06210 699 aaPredicted RBP15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 WDR59Q6PJI9 974 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 KBTBD4Q9NVX7 518 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 PCDHA1Q9Y5I3 950 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 ZRANB2O95218 330 aaKnown RBP eCLIP15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 RSRC2Q7L4I2 434 aaKnown RBP15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 ELOA2Q8IYF1 753 aaPredicted RBP15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 FUT8Q9BYC5 575 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 RAB34Q9BZG1 259 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 CENPHQ9H3R5 247 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 MTMR4Q9NYA4 1195 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 MKRN1Q9UHC7 482 aaKnown RBP15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 RHOBTB3O94955 611 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 GYS1P13807 737 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 ATP2B4P23634 1241 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 HNRNPH2P55795 449 aaKnown RBP15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 POLR2FP61218 127 aaKnown RBP15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 C16orf86Q6ZW13 317 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 GOLGA6L1Q8N7Z2 621 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 FGFBP2Q9BYJ0 223 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 NDST4Q9H3R1 872 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 GOLPH3Q9H4A6 298 aa15.19■□□□□ 0.02
PRPF40B-209ENST00000548825 LRRC53A6NM62 1247 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 PLCG2P16885 1265 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 EEF1GP26641 437 aaKnown RBP15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 KRT83P78385 493 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 GRB10Q13322 594 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 SECISBP2LQ93073 1101 aaKnown RBP15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 CCDC51Q96ER9 411 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 MMTAG2Q9BU76 263 aaKnown RBP15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 CHD4Q14839 1912 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 DUOX1Q9NRD9 1551 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 CCDC66A2RUB6 948 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 POTEFA5A3E0 1075 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 CLSTN1O94985 981 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 POTEIP0CG38 1075 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 RHBDL3P58872 404 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 EZH2Q15910 746 aaKnown RBP15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 NFRKBQ6P4R8 1299 aa15.18■□□□□ 0.02
PRPF40B-209ENST00000548825 POTEGQ6S5H5 508 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms