RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 MEIS2O14770 477 aa17.19■□□□□ 0.34
CLPTM1-202ENST00000541297 SLC37A4O43826 429 aa17.19■□□□□ 0.34
CLPTM1-202ENST00000541297 OR52Z1P0C646 297 aa17.19■□□□□ 0.34
CLPTM1-202ENST00000541297 H2AFXP16104 143 aaPredicted RBP17.19■□□□□ 0.34
CLPTM1-202ENST00000541297 SSC5DA1L4H1 1573 aa17.19■□□□□ 0.34
CLPTM1-202ENST00000541297 SFPQP23246 707 aaKnown RBP eCLIP17.19■□□□□ 0.34
CLPTM1-202ENST00000541297 AFMP43652 599 aa17.19■□□□□ 0.34
CLPTM1-202ENST00000541297 P2RX7Q99572 595 aaKnown RBP17.19■□□□□ 0.34
CLPTM1-202ENST00000541297 HOXA13P31271 388 aaPredicted RBP17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 LONP1P36776 959 aaKnown RBP17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 MDM2Q00987 491 aaPredicted RBP17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 SPP2Q13103 211 aa17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 POSTNQ15063 836 aa17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 GPR162Q16538 588 aa17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 SCYL3Q8IZE3 742 aa17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 CCDC150Q8NCX0 1101 aa17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 STAMQ92783 540 aa17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 UIMC1Q96RL1 719 aa17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 PCDHA5Q9Y5H7 936 aa17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 OPLAHO14841 1288 aa17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 CASP1P29466 404 aa17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 TECP42680 631 aa17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 BMS1Q14692 1282 aaKnown RBP17.18■□□□□ 0.34
CLPTM1-202ENST00000541297 ADM5C9JUS6 153 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 LAD1O00515 517 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 TXKP42681 527 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 CLCN6P51797 869 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 KARSQ15046 597 aaKnown RBP17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 PLIN2Q99541 437 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 ANO3Q9BYT9 981 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 TANGO6Q9C0B7 1094 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 KIAA1683Q9H0B3 1180 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 RANBP17Q9H2T7 1088 aaKnown RBP17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 PICK1Q9NRD5 415 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 FEM1BQ9UK73 627 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 CCDC66A2RUB6 948 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 CALCRLQ16602 461 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 RASSF8Q8NHQ8 419 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 HOOK2Q96ED9 719 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 TUBE1Q9UJT0 475 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 ZNF112Q9UJU3 913 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.17■□□□□ 0.346e-9■■■■■ 35.4
CLPTM1-202ENST00000541297 FHOD1Q9Y613 1164 aa17.17■□□□□ 0.34
CLPTM1-202ENST00000541297 FAM160B2Q86V87 743 aa17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 GJA10Q969M2 543 aa17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 KLRG1Q96E93 195 aa17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 BPIFA3Q9BQP9 254 aa17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 GLT8D2Q9H1C3 349 aa17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 HOOK1Q9UJC3 728 aaKnown RBP17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 PHIPQ8WWQ0 1821 aa17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 PTPRAP18433 802 aa17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 PRPHP41219 470 aa17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 NLRP12P59046 1061 aa17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 ARHGAP29Q52LW3 1261 aa17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 TBC1D5Q92609 795 aa17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 DCPSQ96C86 337 aaKnown RBP17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 EMILIN3Q9NT22 766 aa17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 ZHX2Q9Y6X8 837 aa17.16■□□□□ 0.34
CLPTM1-202ENST00000541297 WDR46O15213 610 aaKnown RBP17.15■□□□□ 0.34
CLPTM1-202ENST00000541297 CFBP00751 764 aa17.15■□□□□ 0.34
CLPTM1-202ENST00000541297 VCAM1P19320 739 aa17.15■□□□□ 0.34
CLPTM1-202ENST00000541297 TXLNAP40222 546 aa17.15■□□□□ 0.34
CLPTM1-202ENST00000541297 DPY19L2Q6NUT2 758 aa17.15■□□□□ 0.34
CLPTM1-202ENST00000541297 LPAR1Q92633 364 aa17.15■□□□□ 0.34
CLPTM1-202ENST00000541297 DDX25Q9UHL0 483 aaKnown RBP17.15■□□□□ 0.34
CLPTM1-202ENST00000541297 PPP2R3BQ9Y5P8 575 aa17.15■□□□□ 0.34
CLPTM1-202ENST00000541297 UBA7P41226 1012 aa17.15■□□□□ 0.34
CLPTM1-202ENST00000541297 NCAPHQ15003 741 aa17.15■□□□□ 0.34
CLPTM1-202ENST00000541297 FCHSD1Q86WN1 690 aa17.15■□□□□ 0.34
CLPTM1-202ENST00000541297 PAGE5Q96GU1 130 aa17.15■□□□□ 0.34
CLPTM1-202ENST00000541297 GINM1Q9NU53 330 aa17.15■□□□□ 0.34
CLPTM1-202ENST00000541297 SPDYE3A6NKU9 549 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 E2F4Q16254 413 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 SUPT20HL1Q3ZLR7 823 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 KANK3Q6NY19 840 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 SULF1Q8IWU6 871 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 IQUBQ8NA54 791 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 AGBL1Q96MI9 1066 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 MTMR9Q96QG7 549 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 VGLL3A8MV65 326 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 PLA2G6O60733 806 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 FLOT1O75955 427 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 CPXCR1Q8N123 301 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 ZNF280CQ8ND82 737 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 SMARCE1Q969G3 411 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 RPAP3Q9H6T3 665 aaPredicted RBP17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 DNAI1Q9UI46 699 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 PITPNM2Q9BZ72 1349 aa17.14■□□□□ 0.33
CLPTM1-202ENST00000541297 KCNJ6P48051 423 aa17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 HMGCS2P54868 508 aa17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 BACE1P56817 501 aa17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 PPP4R3AQ6IN85 833 aa17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 LDHDQ86WU2 507 aa17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 DISC1Q9NRI5 854 aa17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 PNMA6AP0CW24 399 aaPredicted RBP17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 ATP1A3P13637 1013 aa17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 STAT6P42226 847 aa17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 ETF1P62495 437 aaKnown RBP17.13■□□□□ 0.33
CLPTM1-202ENST00000541297 AP3B2Q13367 1082 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms